Pseudoliparis swirei (Mariana hadal snailfish): 130200201
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Entry
130200201 CDS
T09868
Symbol
rerea
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130200201 (rerea)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130200201 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
DUF7952
Myb_DNA-bind_7
DUF7573
CCDC47
Motif
Other DBs
NCBI-GeneID:
130200201
NCBI-ProteinID:
XP_056280238
LinkDB
All DBs
Position
9:complement(11925743..12020322)
Genome browser
AA seq
1523 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDRDKRESGKSRRLDGDRGDRESESSRPRRSCTLEGGAKNYA
ESDHSEDEDNENGSAGGGLGTAEEAGKKGKKKTPKRKSRYERTENGEITSFITEDDVVYR
PGDCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNE
NDSGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARIDSFFY
ILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGQAVNENEELVWMPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPV
PKLIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETRELITFYYYWKKTPEAASCR
AHRRHRRQPVFRRIKTRTASTPVNTTSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACR
HCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLSG
KHSMRTRRNRGSMSTLRSGRKKQTGSPDGRTSPTNDDLRSSGRTSPSAASTDSTDSKTDS
MKKPSKKIKEEAPSPMKSAKRLREKGASDTEEPERASAKKSKTQELSRPDSPSECEGEGE
SSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQLLQSQHPPVIQCQ
PGTSTASSAPPPPTASASPTAASISLPPQPLAIPLSLIQSGASLHPQRLPSPHSPLTQAP
PPGPPVPPQSLPSSHHGPMPPSPHPLQPGPPHMPHPLSMPPQGFPMGQSQVPPLPMCVQS
QQRPHSPPSQSQSSAPPGQPPREQPLPPAPMSMSHIKPPPTTPIPQILHPQSHKHPPHVS
APPFPQMPSNLPPPPALKPLSSLSTHHPPLAHPPPLQLMPQGQQLQPPPAQPPVLTQSQS
LPPPTSHQPPAASHSNGPQQPPFSSHPFNTVLPPTGPPPCSSNSMPGIQPPSSSAPPSSI
SMPLPASVTCAGPGPALPPVQIKEEPLDEMEEPESPPRPPRSPSPEPTIVNTPSHASQSA
RFYKHLDRGYNSCSRTDYYFTPLASSKLAKKREEALEKAKREAEQKLREEKERERERERE
KEREREREKEADRAAKASSSSHESRMLESHMVSHAHMRAHYDSQPMSIAAVPPYIGPDTP
ALRTLSEYARPHVMSPSNRNHPFFMSLNPSDPLLAYHMPSFYNADPAMRERELREREMRE
REIRERELRERMKPGFEVKPPEMDSLHPSTNPMEHFARHGAMTLSPMAGPHPFASFHPGL
NPLERERLALAAGPQLRPEMSYPERLAAERLHAERMATVANDPIARLQMFNVTPHHHQHS
HIHSHLHLHQQDPLHQGGECLVCPPGSGAHPLAIEAMAGGPHLARFPYPHGGIPNALLGQ
HPHEHEMLRHPVFGTPYPRELQGLPPQMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHM
HGGPLPGQEDYYSRLKKESDKQL
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaggagagggagaaagagcgggacagggacagagacagggac
cgggacaagagagagtccggtaagtcgcgccggctggacggggaccggggcgaccgcgag
agcgagagctccaggcctcgacgcagctgtacgctggagggcggggccaagaactatgca
gagagcgaccacagcgaggacgaggacaacgaaaatggcagcgcaggcggagggctcggc
acggcggaagaggccggcaagaagggcaagaagaagacgcccaagaggaagtcgcgctac
gagcgcacggagaacggggaaatcacgtccttcatcacagaagacgatgttgtttacaga
cccggagattgtgtgtacattgagagtcggcggcccaacactccctacttcatttgtagc
attcaggatttcaagctgagtaaacgggaccatctgctgatgaatgtgaaatggtactac
cgccagtcggaggtgcccgactctgtctaccagcacctggtgcaggatcgcaacaatgaa
aacgactctggccgggagctggtcatcacagacccggtggtcagaagtcgagagctcttc
atctccgactatgtggacacttatcatgctgctgctctcagggggaaatgcaacatttcc
catttctccgacatttttgctgccagggagttcaaagcccgcatcgactcctttttctat
atcctcggatataaccccgagaccaggcgactaaacagcacacaaggggaaatccgagtg
ggacccagtcaccaagccaagctccctgagctgcagcctttcccttctcctggtggccaa
gccgtgaacgagaacgaggagctggtctggatgccgggggtcaatgactgtgatctcctc
atgtaccttcgagccgccaggagcatggctgcctttgcagggatgtgcgacggcggctca
acagaagacgggtgtttagcagcctctcgagatgacactactttaaacgcacttaacact
cttcacgagagcagctatgatgcaggaaaagctctgcagcgtctggtgaagaagccggta
cccaaactgatagagaagtgctggtctgaggatgaagtgaagcgcttcattaaaggattg
agacagttcggcaaaaacttcttcaggatccgaaaagagctgctgcccaacaaagaaacg
agagagcttattaccttctactactattggaagaagacccccgaggcagccagttgtcga
gcccaccgcagacaccgccgccagcccgtcttccgtcgcatcaagacgcgaaccgcttca
actcctgtcaacactacctcgcggcccccctccagcgagttcttggacctcagctccgcc
agtgaagatgactttgacagtgaagacagcgaacaggagctgaagggctacgcctgccgc
cactgtttcaccaccacctccaaggactggcaccacgggggtcgggagaacatcttgctg
tgcacagactgccgcatccacttcaagaagtacggtgagctgccccccatcgagaagccc
gtggacccgccgccatttatgttcaaacctgtcaaagaggaagaggatggactcagcggg
aagcatagcatgaggacccgacggaacagaggctcgatgtcgacgctacgcagtggtcgt
aagaagcagacgggcagtcctgatggcagaacgtcgcccaccaacgacgacttgcgctcc
agcggacggacctctcccagcgctgcgagtaccgacagcacagacagcaagaccgactcc
atgaagaagcccagcaagaagattaaagaggaggctccttcaccgatgaagagtgccaaa
cggctgcgagagaagggcgcctccgacacagaagagcccgagagggccagcgccaaaaag
tccaagacacaagagctgagtcggccagactcgccctcagaatgcgagggggagggtgag
agctctgatgggcgcagcatcaacgaggagctcagtagcgatcctaaagacattgaccag
gacaaccggagctcctccccgagcatccccagcccccgcgacaacgaaagtgactcggac
tcgtcagcccagcagcagcagctcctgcagagccagcaccctccagtcatccagtgtcag
ccaggcacctcgaccgcctcctcggcaccgcctccgccgacagcctcagcctcccccaca
gcagcctccatctctctccctccccagcccttggcaatcccgttgtctctcatccagtca
ggagcatccctccaccctcaaaggctcccctccccacattcacctttgactcaggctccg
cctcccggccccccggtcccacctcaatcgttacccagctcgcatcatgggcccatgcct
ccctctccacatccgctgcagcctggccccccacacatgcctcaccctctctccatgccc
cctcagggcttcccaatgggtcagtctcaggtcccgcccctgccgatgtgtgtccagtcg
cagcagaggccgcactctcctccgtcccagtcccagtcatctgctccgcctggccagcct
cccagagagcagccccttccccctgccccaatgtccatgtctcacatcaagcccccgcca
acgacacccatccctcagatactccacccacagtcccacaaacacccaccccacgtgtcg
gcacctccgttccctcagatgccttcaaacctgccgccgcctcctgccctcaagcccctc
agctcgttatccacacaccatcctccattagcacatccacctccactccagctcatgcct
caggggcagcagcttcagcctccaccagcgcagcctccagtgctcactcagtcccagagc
ctccccccaccaaccagccaccaacctccagcagcctcacactccaatgggccgcagcag
ccgccgttctcgtcccatcctttcaatacagttctacctccaaccggccctcccccgtgc
tcgtcgaactctatgcctggcatccagcctccgtcttcctccgctccaccctcctccatc
tccatgccgctgcctgcctcggtcacttgtgccggcccgggcccggcgctcccacctgta
caaatcaaagaggagcctctggacgagatggaagagccagagagcccgccacgccctccg
agaagcccctccccagagcctaccattgtcaatacgcccagccatgccagccagtcggcg
cggttctacaagcacctggaccgcggctacaactcgtgttctcgcacagattactacttc
actccactggcttcatctaaactggcaaagaagcgagaagaagctctggagaaagccaag
agggaagcggagcagaaactacgggaagagaaggagagggagagggagagggagagggaa
aaagagcgagagcgggaacgagagaaagaagcggatcgagctgcgaaagcttccagttcc
tctcacgagagcaggatgcttgagtctcatatggttagccacgcccacatgcgtgcacat
tatgactcccaacccatgtccatcgcagcggtgcctccgtacatcggccccgacaccccc
gccctgcgcaccctcagcgagtacgcccggccccacgtcatgtccccctccaatcggaac
caccctttcttcatgtccctcaacccttcagacccgctgctggcctatcacatgcccagc
ttttacaacgccgacccagccatgcgggagcgtgagcttcgggaacgggagatgcgcgag
agggagattcgcgagagggagctgagggaaaggatgaaacctggttttgaggttaagcct
ccggagatggactcacttcacccctccacaaaccccatggagcactttgcccggcacggg
gccatgacgttgtcccccatggccggccctcaccctttcgcctccttccatccgggcctg
aacccattagagcgcgagcggctggcccttgctgctgggccccagctgcggccagaaatg
agctacccagagaggttggctgcagagagactccatgcggagaggatggccaccgtggcc
aacgatcccatcgcccgcctccagatgttcaacgtcacgccacaccaccaccagcactcg
catattcactcccacctccacctccaccagcaagatcctcttcaccaagggggggaatgt
cttgtgtgtcccccaggctcaggggcccatcccctggcgatcgaggccatggcaggagga
cctcacctggctcggtttccttacccgcacggcggcatccccaacgctctcctgggccag
catccacacgaacacgagatgctgcgccacccggtcttcggtacgccatacccgcgggaa
ctacaaggcctgccaccgcaaatgtctgcagcccaccagcttcaggccatgcatgcccag
tctgcggagctccagaggctggccatggagcagcagtggctccacggacaccatcacatg
cacgggggaccgctgcccggccaggaggactactacagccggctgaagaaggagagcgac
aagcagctgtaa
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integrated database retrieval system
