Pseudoliparis swirei (Mariana hadal snailfish): 130200216
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Entry
130200216 CDS
T09868
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130200216 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130200216 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130200216 (si:dkey-251i10.3)
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Gene cluster
GFIT
Motif
Pfam:
Utp14
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
130200216
NCBI-ProteinID:
XP_056280250
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Position
2:complement(337579..340096)
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AA seq
761 aa
AA seq
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MAEVSQRNVSKTALKENPEVGDMSAAVRTDVFSDDDEEDLNKADEISSDEDDEDERKRQK
LLEAISALGGKRKKKLGERSEASVHMSEFTVKADGEGDRIDLSDLIGTMGKTSVLPAKTK
KQLKNLQRVNRTIECPLSKQESQRIQRDVAFQKVSKEVTRWKSIIKQNQRAEQLVFPLNQ
EPAGPKPMERVVSGWKAQTPLEQEIFAVLSANKQPVNDPILTPVEEASVRAMSLEDAKIR
RAELQKARVLQSYYESKARRERKIKSKKYHKVQNKANRKDFLKQFDEMVKTDPAAALEEL
NKIELARMQERMSLKHQNSGKWAKSKAIMAKYDDGARKAMQQQLEVNKELTQKLVSSMNN
EEEEEEEEEKEVELLPDVVNDAEPGLDSLNPWMRGKLSEEPTEQEMEDPVALTAEKPGNT
IVEEEEEEEEEEVEETEEEVLLREFDSRRKLRQAQEALAAPMISADEEEDEASAAEDPDE
EEELTEFTSLFLGRAEVRQEAEATAAARLEEDVIRIRSLDDMEVLGQTPTSVEAAAPPTD
LEQLPPAPQTSGKKRKRKRGIELKEVLTKGTKVIKVPLAPTTEDTEDSEKTDQRGLIKEA
FAGDDVVSDFLQDKRRQEAAGKPKVVDLTLPGWGEWGGTGLRPSRSKRRRFRTKAAPPPP
RKDQHLPSVIMSEKRNRSISLHQVSTLPFPFQNHAQFESTIRSPLGRTWNTERTVKKIVK
PRVVTKLGAIIEPMAREELLKNKTQASAGSNRSVDSWKRKH
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtctcccagaggaatgtgagtaaaacggctctcaaggagaaccccgaggta
ggagacatgagcgcggcggtgaggaccgatgtgttctccgacgacgacgaggaagattta
aataaagcggatgaaatcagcagcgacgaggacgacgaggatgaacgaaaacggcaaaag
ctgctggaagccatcagcgctctcggtgggaagaggaagaagaagctcggggagagatcc
gaggcgtccgtccacatgtccgagttcaccgtcaaggcggacggggaaggagacagaatc
gacctgtcggacctcatcgggaccatggggaaaacctccgtcctgccagccaagaccaag
aagcagctgaagaacctacagcgagtgaacaggactattgagtgtcctctgagcaagcag
gagagccagaggatccagagagacgtggcctttcagaaggtgtccaaagaggtgacccgg
tggaagagcatcatcaaacagaaccagagggccgagcagctggtcttccccctgaaccag
gagcccgctggccccaagcccatggagagggtggtgagcggctggaaggcacaaactccc
ctggagcaggagatcttcgccgtcttgtccgccaacaagcagccggtcaacgaccccatc
ttgacccccgtggaggaggcctcggtgagggcgatgagcctggaggatgccaagatccgg
cgcgcggagctgcagaaagcccgcgtgctgcagtcctactacgagtccaaggcccggaga
gagaggaagattaagagcaagaagtaccacaaggtgcagaacaaggccaatcgcaaggac
ttcctgaaacagttcgacgagatggtgaagacggacccggccgccgccttggaggagctg
aacaagatcgagctggcccgcatgcaggagcggatgtccctgaagcaccagaacagcggc
aagtgggccaagtcgaaggccatcatggccaaatacgacgacggggctcgcaaagccatg
cagcagcagctggaggtaaacaaagagctgacccaaaaactagtgagctccatgaataac
gaggaggaggaggaggaggaagaggagaaggaggtagagctgctgcctgatgttgtaaac
gatgcagagccgggactggactcgttaaacccctggatgagagggaagctctctgaagaa
cccacagaacaagagatggaagaccctgtcgcgctcacagctgagaagcctggaaataca
attgtagaagaggaggaggaggaggaggaggaggaggttgaggagacggaagaggaagtg
ctcctccgagagtttgacagcaggaggaaactgcgtcaggctcaggaggctcttgcagca
ccgatgatatctgcggacgaggaggaggatgaagcgtctgcagcagaggacccggatgag
gaggaagagctcacagagttcaccagcctgttcctcgggagagcagaagtccgtcaggag
gccgaggcgaccgccgctgctcggctggaggaagacgtgatcaggatcaggtctctggac
gacatggaggtcctcggtcagacgccgaccagcgttgaggcggctgctcctcccacagac
ctggagcagctgcctcctgctcctcaaacatctggcaagaagaggaaacggaagagaggg
atcgagctgaaggaagttctcaccaaagggacaaaggtcatcaaagtgcctctcgctccg
accacggaggacacggaggactctgagaagacggaccagcgggggctcatcaaagaggcc
ttcgccggggacgacgtcgtctccgacttcctccaggacaagaggaggcaggaggccgcg
gggaagcccaaggtggtggacctgacgctgcccgggtggggtgagtggggcggcacgggc
ctcaggccgtcccgcagcaagcgcaggaggttccggaccaaggcggcgccgcctccgccc
cggaaggaccaacacctgcccagcgtcatcatgtcggagaagaggaaccgctccatcagc
ctccaccaggtgagcacgctgcccttccccttccagaaccacgcgcagttcgagagcacc
atccgctcgccgctgggccgcacctggaacacggagcgcaccgtgaagaagatcgtcaag
ccccgggtggtcacgaagctgggcgccatcatcgagcccatggcgcgggaggagctgctg
aaaaacaagacgcaggcgtccgccgggagtaaccgcagtgtggactcgtggaaaaggaaa
cattga
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