Pseudoliparis swirei (Mariana hadal snailfish): 130200234
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Entry
130200234 CDS
T09868
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130200234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130200234
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130200234
SSDB
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130200234
NCBI-ProteinID:
XP_056280263
LinkDB
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Position
10:7433700..7449605
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AA seq
619 aa
AA seq
DB search
MTEGTATQTPAGGQPRGKWANKMEFMFSMAGEIIGLGNVWRFPYLCYKNGGGVFFIPYFV
FLFFCGIPLFFLETALGQYTSEGGVTAWRKICPMFEGLGIAAQVIVAYLNIYYIVVLAWA
IFYLFHSFQSPLPWSTCDNWWNTELCHGHSSFFANTDLLQPNSNWSFLDNFTSTSPDYFQ
NFTISDGDSSHSPEEEFWHNRVLRTSDDMSLGKVHWDLALCLLLAWVICYFCIFKGIKWT
GKVVYFTATFPYLMLFILFIRGVTLPGAGDGLKYYLLPDLSKLADPSVWHDAGTQVFFSY
AVCQGVLTALGSYNKYNNNCYRDCLALCCLNSATSIFAGFVVFSVLGFMAHDMGVPMEEV
VSAGPGLVFLAYPRALSLLPGSSFWAVLFFLMVLFLGLDSQFVCVESMATALTDLFPHQL
RRRGGRELLTLVIAVVCFLLGLPLISEGGIYLFTLIDNYGVSGTSLLFIASFETLVIGWV
YGADRFYDNIEDMIGYRPVPVLKYCWMFITPLICWATILYEVGNASEFTVYGYAIGTQGS
LLSSLLIITPLMCIPVFIFVALCKNPNNMTTPSRDLRQARPHKPILTLCKRVIFKAQAQP
DSREEEAKEEMAAGEPGEV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggaacggctacacagactcctgcagggggtcagccgcgagggaaatgggcc
aacaagatggagttcatgttctccatggcgggagagatcattggtctcgggaatgtttgg
cgtttcccttatctgtgctacaaaaatggaggaggtgtcttcttcatcccttactttgtg
ttcctcttcttctgtggcatccctttgttcttcctggagacggcgttgggccagtacacc
agtgaggggggggtgaccgcctggaggaagatatgccccatgttcgagggcttggggatt
gcggcccaagtgattgtggcctatctgaacatctactacatcgtggtgttggcctgggcc
atcttctacctgtttcattccttccaaagcccgctgccctggtccacgtgtgacaactgg
tggaacaccgagttgtgtcacggtcactccagcttctttgcgaacaccgatttgcttcag
cctaactcaaactggtcgttcctagacaacttcacatccacatcacctgactactttcaa
aatttcactatcagtgatggtgactcgtcccactccccggaggaggagttctggcataac
cgtgtgttaaggacttccgatgacatgtccctggggaaggttcactgggacctggctctg
tgtctcctgctggcctgggttatttgttacttctgcatctttaaaggaatcaaatggacc
ggaaaggtggtttacttcactgctacattcccctacctgatgctgttcatcctcttcatc
cgaggagtgacgctcccaggagccggggatggcctgaaatactacctcctcccggacttg
agcaagcttgctgatccaagtgtctggcacgacgctgggactcaggtgttcttctcctac
gccgtgtgccagggagtgctgaccgctctggggagctacaacaaatacaacaataactgc
tacagggattgcttggcactgtgttgcctgaacagtgccaccagtatctttgctggtttc
gtcgtgttctcagtgctgggattcatggcccatgacatgggggtaccgatggaggaagtg
gtttctgccggtccgggtctggtctttttggcatatccaagggctctgtcattactgccg
ggctcatccttctgggccgtgctcttcttcctcatggtcctcttcctgggcctggacagt
cagtttgtgtgtgtggagagcatggcaacggccctcacggacctgttcccacaccagctg
aggaggcggggcggccgagagctgctgaccctggtcatagccgtcgtctgttttctattg
gggctgccgctcatcagtgagggagggatatacctcttcacactcattgacaactacggc
gtcagtggaaccagtctcctcttcatcgcctcttttgagacgctcgtcattggctgggtg
tacggtgcggaccgtttctatgacaacattgaggacatgatcgggtaccgaccggttccc
gtgctgaagtactgctggatgttcatcacgccgctcatttgttgggctacgatactgtat
gaagtggggaacgccagcgagttcacagtgtacggttatgcaatcggcacccagggcagc
ctcctgagctccctcctcatcatcactcctctgatgtgtatcccagtgtttatatttgtc
gcactgtgcaagaatcccaataacatgacgacaccatcgcgtgacctgcgccaggcccgg
cctcacaagcccatcctcacgctgtgtaaacgcgtcatcttcaaggctcaggcgcagccg
gacagccgagaggaggaagccaaggaggagatggcggcgggggaacccggcgaggtctga
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