Pseudoliparis swirei (Mariana hadal snailfish): 130200239
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Entry
130200239 CDS
T09868
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
130200239
NCBI-ProteinID:
XP_056280271
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Position
10:complement(6827521..6999608)
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AA seq
911 aa
AA seq
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MSSVSAPAQAAPSPAASLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGAMAR
RAAQGQPDTKDTPDEPWAFQAREYLRKKLIGKEVCFTVEIKTALGREYGIVYLGRDTTGE
NIADSLVNEGLATVRREGIRGNNPDQARLCDLEDQSKASKKGMWSEGGGTHTIRDLKYTI
ENPRNYIDSLHQKPINAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTES
TEAFAAEAKFFTESRLLQRDVQIILESCPNQIILGSILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAGERSAKERKVRIWKDYVAPTANLDLKDRQFVAKVMQVMNADAMMVKL
NSGELKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTV
DYIRAATGPGESTPAFSERTCATVTIGGINIAEALISKGLATIIRYRQDDDQRSAHYDEL
LSAEARAIKNGKGLHSKKEVPIHRVADISGEAQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRSSRNMPGGVQVAEPFSDEAMLFTKELVLQREVEVEVE
SMDKAGNFIGWLHIESLNLSIALVENALSKVHFTAERSNYYKTLVSAEDACREKKEKIWA
NYEEKPVEEVVYVTEEKERAANYRAVYVTEICDTLHFYSQDVETGAQLENLMETMRAEIA
AQPPVEGSYAPRRGDICLATFADGEWYRARVEKVESPSRVHVFYIDYGNREVVSSTRLAA
MPPAFGTRTLPAQATEHAFAYIQVPQDEDIRADVVDCIVRDIQNSQCLMNVEYSGATCPH
VTIQFGDTKDDVGLNLVKEGLVMVDVRKEKHLQKIVTEYLNSQESAKSARLNIWRYGDFR
ADDAVEFGYRR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgtttcggcacccgctcaggcagcgccttctccggctgcgtctctgcaaaga
ggaattgtgaagatggtcttgtcaggctgcgccatcattgttcggggccagcctcgaggt
ggcccacccccggagcgtcagatcaatctcagtaatatccgagcaggagccatggcccgt
cgagccgcccagggccagcccgacaccaaggacacccctgatgagccgtgggcctttcaa
gccagagagtacctgcggaagaagctaatcggcaaagaagtgtgcttcactgtggaaatc
aagaccgctttgggcagggagtacggcatagtctacctggggcgagacactacaggcgag
aatattgctgactctttggtgaatgagggcctggccacagtccgcagagaaggaatcagg
gggaacaatccagaccaggccagactctgtgacctggaggaccagtctaaagcttccaag
aagggcatgtggagtgagggtggcggtacacacaccatccgcgacctcaagtacaccata
gagaatccccgcaactacatcgactccttgcatcagaaacctatcaacgccatcatcgag
catgttcgagacggcagtgttgttcgtgccttgctgctccccgactactacctggtcact
gtgatgctttctggagtcaagtgtcccacgttcaagcgagaagcggatggtacagagtca
acagaggcattcgcagcagaggccaaattcttcaccgaatcccgtcttctgcaaagagac
gttcagatcatcctggagagctgccccaaccagatcatactgggctccatccttcacccg
aacggtaacataacagaactcctactgaaggaaggctttgcccgctgtgtggactggtcc
atggctgtctacacccagggagccgagaaactccgagctggtgaacgatctgccaaagag
cgcaaggttcgcatctggaaggactacgtagcacccaccgccaacctggacctgaaggac
agacaatttgtagccaaggtgatgcaggtgatgaacgctgatgccatgatggtgaagctc
aactctggagaactcaagaccatccacctgtccagcattcgccccccgagaattgaggga
gaggagaagaacaaggacaaagacaagcgtttccgtccgctctacgacatcccctacatg
ttcgaggcccgagagttcctgaggaagaagctcattgggaaaaaggtcaatgtgacagtt
gactacatccgagcagctaccggtccgggagaaagcacccctgcattctcagaacgcacc
tgtgccacagtcacaattggcggcattaacatagccgaggctctgatcagcaagggcctg
gccacaatcatcagatacagacaggatgacgaccaacgctccgcccactacgacgagctg
ctttccgcagaggctcgggccatcaagaacgggaaagggctgcacagcaagaaggaagtg
cccatccacagagtggccgatatctctggggaggcgcagaaagccaagcagtttttgccc
ttcctgcagagggccggccggtcagaagctgtggtcgaatacgtcttcagcggatcccgc
ctcaagctctacatgcccaaagaaacctgcctcatcacattcctccttgccggtatcgag
tgtccacgcagttccaggaatatgcccggaggcgtgcaggtggccgagcccttcagtgac
gaggccatgctgttcaccaaagagctggtgctgcaacgagaggtggaagttgaagtggag
agcatggacaaagcggggaacttcattggctggctgcacatcgagagtttgaatctgtca
atcgccctggtggaaaacgctctgtccaaggtccacttcacagccgagcgcagcaactac
tacaaaaccttggtctcggcagaggacgcgtgccgagagaagaaggagaagatctgggcc
aattatgaggagaaaccagtcgaggaggttgtgtatgtaacggaagagaaggagcgagcg
gccaactacagggccgtgtacgtcaccgaaatctgcgacaccctgcacttctactcccag
gacgtagagacaggggcccagttggagaatctgatggagaccatgagagcagagatcgcc
gcccagccgcccgtggaaggatcctacgctccacgccgaggggacatctgcctcgccacg
tttgccgatggcgaatggtacagagccagagtggagaaagttgagtcaccatcaagggtt
cacgtcttctacattgactacggcaatagagaagttgtgtcgtccactcgtctggctgcc
atgccccctgccttcggcacccggaccctgccagcgcaggccaccgagcacgccttcgcc
tacatccaggtcccacaggacgaggatattcgtgcggacgtggtggactgcattgtgcgg
gacatccagaacagccagtgcctgatgaacgtggagtactcgggtgccacctgcccacac
gtcacaatacagtttggcgacaccaaggacgacgtgggcctcaacctggtcaaggaaggc
ttggtcatggtggacgtgcgcaaggagaagcacctgcagaagattgtgaccgaatacctg
aacagtcaagaatctgccaagagcgccaggctcaacatctggcgctacggagacttccgc
gcggacgacgccgtagagtttggttacagacgctaa
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