Pseudoliparis swirei (Mariana hadal snailfish): 130200249
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Entry
130200249 CDS
T09868
Symbol
usp44
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 44
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130200249 (usp44)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130200249 (usp44)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130200249 (usp44)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130200249 (usp44)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130200249 (usp44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
DUF4045
Protamine-3
Motif
Other DBs
NCBI-GeneID:
130200249
NCBI-ProteinID:
XP_056280297
LinkDB
All DBs
Position
10:complement(3538885..3545625)
Genome browser
AA seq
742 aa
AA seq
DB search
MDRCKHVGRLRLAPDHSILKPQKWHCVDCNTSESIWACLGCAHVACGRYIEEHALQHFQQ
QRHPLAMEVNELYVFCYLCDDYVLNDNATGDLKLLRGKLGAIQSQRYEVTTRSGRTLRSA
GAAPDAPVPGGARELQLRDEDRMSTALWHRRRALMGRVFRLWFALTECGKRREEEEEERK
REEEEEEEQKRESRERRRATKRQLLEELENAPLRMSRRLRSKSKRVADAAEATTTRNRTK
SPVTPSLARRPRTPSPAPVAPRRSERTKKVPPTHKPQTRSPAVRLRPRAPPAPPGSAQTP
APPRKQNTKQGGSPFKRRPTVTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLT
QALELLASAVHGQLAVTAPTPLIQRRAFQTSSGTGLSGGASRTRSMELIQPKEPSSKHIS
LCHELHTLFQVMWSGKWALVSPFAMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELE
STGTHTAGAGVPQKRLIKQVLSVVNTIFHGQLLSQVTCLACDHRSNTVEPFWDLSLEFPE
RYHSNSRESAAQASCHLTEMLAKFTETEALEGNIYDCEQCNAARRRSSSKPVLLTEAQKQ
LMVHKLPQVLRLHLKRFRWSGRNHREKIGVHVSFDQLLNMEPYCCRDPSPCSAPSSPSSS
CSAAGSPRPEHFLYDLSAVVMHHGKGFGSGHYTSYCYNTEGGFWVHCNDSKLNVCSVEEV
CRAQAYILFYTQRVTQDKDWLL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtgtaagcatgtggggcggctgcggctggcccccgaccactccatcctcaag
ccccagaagtggcactgcgtggactgcaacaccagcgagtccatctgggcgtgcctgggc
tgcgcgcacgtggcgtgcggccgctacatcgaggagcacgcgctgcagcacttccagcag
cagcgccacccgctggcgatggaggtgaacgagctctacgtcttctgctacctgtgcgac
gactacgtcctgaacgacaacgccaccggggacctgaagctgctgcgcggcaagctgggc
gccatccagagccagcgctacgaggtgaccacgcgcagcgggcgcaccctccgctcggcg
ggcgccgcccccgacgccccggtgccgggcggcgcccgcgagctgcagctgagggacgag
gaccggatgtccacggcgctctggcaccgccgccgggcgctgatggggcgcgtcttccgc
ctctggttcgcgctgaccgaatgcgggaagaggagggaggaggaggaggaggagaggaag
agggaggaggaggaggaggaggagcaaaagagggagtcgcgggagaggaggcgggcgacg
aagaggcagctgctggaggagttggagaacgctcctctccggatgagccggcgcctgcgc
tccaagagcaagagagtcgccgacgcggcggaggcgacgacgacgcgtaaccggaccaaa
tcccccgtgaccccgtcgctcgcccgcaggccgaggaccccgagtcccgcccccgtggcc
cccaggaggagcgaacggaccaaaaaggtcccgccgactcacaaaccccagacccgctcc
cccgccgtcagactgaggcccagagcgcccccggcgccccccggctcggcccaaacgccc
gcccccccccgcaagcagaacactaagcagggcggctcgcccttcaagcggcgccccacg
gtcacccccggcgtgacgggcctgaggaacctgggcaacacctgctacatgaactccatc
ctgcaggtgctgagccacctccacgtcttcagggagtgcttcctgcgcctggacctgacg
caggcgctggagctgctggcgtccgccgtccacgggcagctggcagtgacggccccgacc
cctctgatccagaggagggcgttccagaccagctccggcaccgggctgagcggcggcgcc
tcccggacccgcagcatggagctgatccagcccaaggagcccagctccaagcacatctcc
ctctgccacgagctgcacaccttgttccaggtgatgtggtcgggcaagtgggcgctggtg
tcgcccttcgccatgctccactcggtgtggcagctgatcccggcgttccggggctacgcc
cagcaggacgcgcaggagttcctgtgcgagctgctggacaaggtgcagcacgagctggag
agcaccggcacgcacacggccggcgccggcgtgccccagaagcgcctcatcaagcaggtg
ctcagcgtggtcaacaccatcttccacggccagctcctcagccaggtgacctgcctggcc
tgcgaccaccgctccaacaccgtggagcccttctgggatctgtcgctggagttccccgag
cgttaccacagcaacagccgggagtcggcggcgcaggcctcgtgccacctgacggagatg
ctggccaagttcacggagaccgaagcgctggagggaaacatctacgactgtgagcagtgc
aacgcggctcgccggcgctcctcctccaagccggtcctcctgaccgaagcccagaaacag
ctgatggtgcacaaactgcctcaggtccttcggcttcacctcaaacgcttcaggtggtct
gggcggaatcaccgggagaagatcggcgtccacgtcagcttcgaccagctgctcaacatg
gagccgtactgctgccgagacccctcgccgtgctccgcccccagcagccccagcagctcc
tgcagcgccgcgggctcgccgcgccccgagcacttcctgtacgacctctccgccgtggtg
atgcaccacgggaagggcttcggctccggccactacacgtcctactgctacaacacggaa
ggaggcttctgggttcactgcaacgactccaagctgaacgtgtgctcggtggaggaggtg
tgtcgcgcccaggcctacatcctcttctacacacagcgagtaactcaggacaaagactgg
ctgctatag
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