Pseudoliparis swirei (Mariana hadal snailfish): 130200266
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Entry
130200266 CDS
T09868
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4 isoform X1
KO
K24640
zinc finger BED domain-containing protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130200266 (zbed4)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130200266 (zbed4)
BRITE hierarchy
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
130200266
NCBI-ProteinID:
XP_056280371
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All DBs
Position
10:10469290..10476957
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AA seq
1253 aa
AA seq
DB search
MDGEEELSHMSEDMVSEPNGPMESKKREAKGTCLKIEGQDGYVFKSYSINPRETAEETSP
AISSLTLDKDSHPSPPSLPLSPQDDKESETDPTSSPPSNKCLNTDTEGNPENESYENGTE
GTLHIKEEPRDANGLDEEEETPDDDGLGFGSSVGPFVTRDGDDYSNLLSGYTSTLYDVAM
DAVTQSLLSSMRSNVNPRKKSPAWNHFCISPRDSTKAICLYCMKEFSRGKNEKDLSTSCL
MRHVRRAHPTVLLQDGADVSNLTGSLSSSLMPPSPSSPKNGDLTNSVMSSASPSTSSAEN
TDPSSKEVFPKVEPNPEPYANSDTICGTLSSSHSNDMNSLEELSDGGPERLHGTPKSSSS
RRRSAVWKHFYLSPADNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHKEVVIEENG
QGNHIPPPYTNPPSLLSRAQLHEPLEVKKEFSLLPSSPDTISDELPQSMEESLGIKEERD
EAMNLSGQDTSLNLSFQTQGEDTLATFSPCHLSEGSSLNQDHLVFQQNKKIMKRVKSEVW
HHFIVSPVDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKNQKGLDEKDSPS
PYPYANLPVTDAVSTKETESSVGKKKPHTLPAFSKKTSKLWNHFSISPTDPTKVVCLHCG
RTISRGKKTTNLGTSCLFRHMQRFHGHVLESNNAISGDAQSAGIRVKQELMDTSVFTAGQ
NRERFDERHPVAKKITKLVAEMLALDLQPSAVVENAGLSRLLEYLQPQYSLPPSSYFTST
AIPEMYARVKDVVLTHLKEAESGVVHFTTSIWVSSQTREYLTLTAHWATYESSVRPQGQD
FHCSALLSVSQIDCDHDMHDIPKQLEHLWDSWITSSGLKRGFTVTDSAAISSTLEDYSHV
TVPCFGHTVDLIVGEAIKSQRMVQNLLSIARKLCERVHRSAQAQEKLAELQGLHRLPENP
LVQDVPSKWTTSLFMLERLVEQKKAVDEMSIECNFREVISGDQWEVMLSVCNALKPFEVA
CREMSDRTATLGQVIPLVHILNRKIDLLFDETVGIDTMLVSLKEAMVSRMSATLHDPRYT
WATMLDPRYKTSLFTEEEAERCKQELIGELDASSSTSAAAKPAPPPLHNGCGGGEARPNK
DDLWSLMADIRQKIKHEEKPKSSELAVLEYLEEEILDQSCDPLDYWNLKKFPWPDLAKVA
ARYVGCPPSIVPAETLFSTAGVNCALNQQRPSLENMEGLLFLKVNLPLIYFQY
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaggaagagctgtctcacatgagtgaggatatggtcagtgaacccaatggc
cccatggaaagtaaaaaaagagaggccaaagggacctgcctcaaaattgagggccaagat
ggctatgtttttaaatcctacagcatcaacccacgtgagactgcggaagaaacgtcaccc
gctatctcctcgctaacactggataaagactctcacccttctcccccttctctcccttta
tctcctcaggatgacaaagaaagtgagactgatccaacttcttcccccccttcaaacaaa
tgcctaaacactgataccgagggaaacccggagaacgaaagttatgaaaacgggaccgaa
ggaaccctgcatatcaaagaggagcccagggatgcaaatgggttggacgaggaggaggaa
accccggacgatgatgggctcgggtttggcagctctgttggcccgtttgtaacgagagat
ggcgacgactatagtaatttactaagtggatacacaagcaccctttatgatgttgccatg
gacgctgtcactcagagccttctgtcatctatgaggagtaacgtcaacccgaggaaaaag
tcccccgcgtggaatcatttctgcatctcgccgcgagacagcaccaaagcaatctgttta
tactgcatgaaagagttcagccggggcaagaacgagaaagacctcagcaccagctgtttg
atgaggcacgtgcgaagggcccaccccactgtgcttttacaagacggagcggacgtctcc
aatctgaccggctccctgtcctcgtcgttgatgcctccatccccgagctcgccaaaaaat
ggagacttgacaaacagcgtcatgtcttccgcctcaccgtccacctcctcggctgaaaat
acggacccgtcatccaaagaagtgttccccaaagtcgaaccaaatccggaaccgtacgcc
aacagcgacaccatttgcggcacgctctcgtcctcacattccaatgacatgaacagcctc
gaagagctgtccgacggcgggcccgagcgcctccacgggaccccgaaaagctcgagttcc
cgccggagatcggcggtgtggaagcacttctacctgtcgcccgcggacaattccaaagcc
gtgtgcatccattgcatgaacgaattcagtcggggcaaaaacgggaaggatctcgggacg
agctgtctcattcgtcacatgtggagggcgcacaaagaggtcgtcattgaggaaaacgga
cagggcaaccacattcccccaccctacaccaacccgccctcactactgtcccgcgcacaa
ctacacgagccactggaagtgaaaaaagaattttcccttcttccgtcctcccccgacacc
atatcggatgaattgccccaaagcatggaggagagcctgggtataaaagaggaacgtgac
gaggcgatgaatctctcagggcaggacacctctctcaatctctccttccaaactcagggg
gaggacacgctcgccaccttctccccgtgccacctctccgagggctcgagcctcaatcag
gaccatttggttttccagcaaaacaagaagatcatgaagcgggtgaaatccgaagtgtgg
caccacttcatcgtgtcgccagtcgaccagttaaaagcactgtgccgctactgtccgtgc
gtcatcagccgggggaagcggggcgactttggtacgagctgtctgatgaggcatctgatg
agacgccacccggacgtcctcaaaaaccaaaaaggcctcgacgagaaggactccccctcc
ccttatccctacgccaatctccccgtgacagacgcagtttcaaccaaagaaaccgagagc
tccgttggtaagaaaaagccacacacactgcccgctttcagtaaaaagacatcaaaactg
tggaaccatttctccatttcgcccaccgaccccacgaaggtggtctgtttgcactgcggc
cgcactattagcagaggcaaaaagaccacgaacctcggcacgagctgcctcttccggcac
atgcagaggtttcacggacatgttctcgaaagcaacaatgctatctcaggtgacgcgcag
tccgctggaatccgcgtcaagcaggagctcatggacacttcggttttcaccgcgggacag
aaccgcgagcggttcgacgagcgccacccggtcgccaaaaaaatcaccaaactcgtcgca
gaaatgctcgcactggatctccagccatccgccgtggtggagaacgccggtctgagccgg
ctcctcgagtacctccagcctcagtattctctcccgccgtcttcgtacttcaccagcact
gccataccggagatgtacgcgagggtgaaggacgtcgtgctgacccacctgaaggaagcg
gagagcggggtcgtccacttcaccacgagtatttgggtgagtagccagacgagggaatac
ctgaccctcactgcccactgggcgacgtacgagtcgagcgtccggccccagggtcaggac
ttccactgctccgctctcctgagcgtctcccaaatcgactgcgatcacgacatgcacgac
atccccaagcagctggagcacctgtgggattcctggatcacgtcgtcggggctgaagagg
ggcttcacggtcaccgacagcgccgccatcagcagcaccttggaggactacagccacgtc
actgtgccgtgcttcgggcacaccgtcgacctcatcgtcggcgaagccataaagagccag
cggatggtccagaacctcctgagcatcgcgcggaagctctgcgagcgcgtgcaccgctcg
gcgcaggcccaggagaagctggcggagctccaggggctccaccggctgccggagaacccg
ctggttcaggacgtgccgtccaagtggacgacctccctcttcatgctggagcggctggtg
gagcagaagaaggccgtcgacgagatgtccatcgagtgcaacttccgggaggtgatcagc
ggcgaccagtgggaggtgatgctgtcggtgtgcaacgcgctgaagccgttcgaggtcgcc
tgccgggagatgagcgaccgcaccgccacgctgggccaagtgatcccgctggttcacatc
ctcaaccgcaagatcgacctgctgttcgacgagaccgtgggcatcgacaccatgctggtg
tctctgaaggaggccatggtgagccggatgtcggcgacgctgcacgacccgcggtacacc
tgggcgaccatgctggacccgcggtacaagacgtcgctgttcacggaggaggaggcggag
cggtgcaaacaggagctgatcggggagctggacgcgtcctcttctacctcagcggccgcg
aagccggcgccgccgccgctgcacaacggctgcggcggcggcgaggcccgcccaaacaaa
gacgacctctggtccctcatggccgacatccggcaaaagataaaacacgaggagaagcca
aagtcctccgagctggccgtgctggagtacctcgaggaagagatactcgatcaaagctgt
gaccccctcgactactggaacctgaaaaagttcccgtggcccgatctcgccaaagtagcc
gcccgttacgtgggctgcccgcccagcatcgtcccggcggagacgctgttcagcacagcc
ggcgtcaactgtgccctgaatcaacagcggccttcactggagaacatggagggtctgctg
ttcctcaaggtcaacctcccgttgatttattttcagtactga
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