Pseudoliparis swirei (Mariana hadal snailfish): 130200272
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Entry
130200272 CDS
T09868
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03320
PPAR signaling pathway
pswi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130200272
03320 PPAR signaling pathway
130200272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130200272
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130200272
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130200272
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
130200272
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130200272
NCBI-ProteinID:
XP_056280388
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Position
10:10882061..10896236
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AA seq
477 aa
AA seq
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MARDLFSPPSPLGDSLLDSPLCGDLMEDLRDISQSIGGDTLEFDFPVYQSTDSGSESSIA
LDTLTPASSPSSGVCAAAPSSEESSGPLNLECRVCSDKASGFHYGVHACEGCKGFFRRTI
RLKLEYDKCERNCKIQKKNRNKCQYCRFHKCLSAGMSHNAIRFGRMPQAEKLKLKAECKM
VEKEVASPMLTDHKTLVGQIHEAYMKNFNMNKAKARLILTGKTSKPPFIIHDMETFQLAE
RTLAAQVLNGDSPEPESGPQAGEVVLATGCVELQQCEDEARLFHCCQSTSVETVTELTEF
AKAVPGFQNLDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGGGFITREFLKSRRRP
FSDMMEPKFQFATRFNSLELDDSDLALFVAAIICCGDRPGLVDVPLVEQLQESIVQALGL
HLLANHPDDNFLFPRLLQKLADLRELVTEHAQLVQQIKMTEDTSLHPLLQEIYRDMY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccagggatctcttcagccccccgtcccctctcggggattccctgctcgacagtccg
ctgtgtggagacctgatggaggatcttcgtgacatctcccagtctattggaggagacact
ctggaatttgatttcccggtgtaccagagcactgactcggggtccgagagctccattgca
ctggacaccttgaccccagcctccagtccgtcgtcgggggtgtgcgcggcagctccgagt
tcagaggagagctccggacccctcaacctggagtgccgggtgtgctccgacaaggcctcg
ggcttccactacggggtgcacgcctgtgagggctgcaagggtttcttccggaggaccatc
aggctgaagctggagtacgataagtgtgaacgcaactgcaaaatccaaaagaagaaccgc
aacaagtgccagtactgccgcttccacaagtgcctctctgcgggcatgtcccacaatgcc
atccggtttggtcgcatgcctcaggcggagaagctgaagttaaaggcagaatgcaagatg
gtggagaaagaggtggcgagccccatgctgaccgaccacaagactctggtggggcagatc
cacgaagcctacatgaagaacttcaacatgaacaaggcgaaagcccggcttatactcacc
gggaagaccagcaagccgcctttcatcattcacgacatggagaccttccagctggcggag
aggacgctagcggcccaggtgctaaacggtgacagtccggagcccgagagcggccctcaa
gctggggaggtggttctggccaccgggtgtgtggaactccagcagtgtgaggatgaagcc
cggctcttccactgctgccagagcacctcggtggagacggtcactgagctgacggagttc
gccaaggcggtgccgggtttccaaaacctggatctgaatgaccaggtgactctcttgaag
tatggcgtttatgaagcactcttcaccctcctggcctcctgcatgaacaaagacggcctc
ctggtggcccgtggaggaggcttcatcacccgagagttcctcaagagccgccggcggcca
tttagcgacatgatggagcccaaattccagtttgctacacgcttcaactccctggagctg
gacgacagtgacctggcccttttcgtggctgccataatctgctgcggagatcgcccaggc
ctggtggacgtgcctcttgtagagcagctgcaggaaagcattgttcaggcactcgggctc
cacctgctggccaaccacccggacgacaacttcctcttccctagactgctgcagaaactg
gccgacctccgggagctggtcaccgagcatgctcagttggtgcagcaaatcaagatgacg
gaggacacgtcgctgcacccgctcctgcaagagatatacagggacatgtactga
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