Pseudoliparis swirei (Mariana hadal snailfish): 130200300
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Entry
130200300 CDS
T09868
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130200300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130200300
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
130200300
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
130200300
NCBI-ProteinID:
XP_056280432
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Position
10:9207038..9218402
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AA seq
790 aa
AA seq
DB search
MAEAAEDGDKMTSQQALCDPDQGSIKRPGISTLKLFIMALSFACFSKALAGTYMKSSITQ
IERRFDLSSTHVGLIDGSFEMGNLLFLAVVSHFGAKLHRPRLIAVGCFLMAVGSFLTGLT
HFFMGRYKYNTIIQVFQNESMNIAACRKTEVLEIQIEPSVEDNATCERESGSNMWIYVFL
GNALRGIGETPVTPLGISYIDDFARAENSPFYIACLQTITLLGPMFGFLLGSYCAKLYVD
IGYVDIESVSITPKDARWVGAWWMGFMVSSVLLLLSSIPFWFLPRSLPNQEEVKGKLTPG
CDTLDGAEDVPNNNNHNLKLTDISKGFVPSLKRLLGTPSYFLLLCGSILKFNSFIGLFTF
KAKYMEQQFGQSASRANFLIGMLNLPAVAVGIFLGGLLMKRYKLSLVSGAQLSFATSFMA
YLLLLLQFGTKCDNIPMAGLTVSYNGTQSASSDSDMLFSECNRDCSCSAEEWDPVCSDSG
ITYISPCMAGCFSSSGYGKNTVFNNCSCVSASLPAGSSRSVRLGQCPHAADCGRSFTAYM
AVSVLSSFINSLGATPGYMVIIRCISPDLKSLALGIQALVTRTLGGLPAPVYFGALIDST
CLKWSIKKCGGMGACRIYDSNMYRIIFLGLITSLSGSSYFFIIAVIVLLRRQFREPQRET
QTQNSKASEGIDLRTASKPTEDDPGNPKPPKVCIRFATELEEGGEVHRIVQLSQIGRLSS
SNITGETQQLKSLTETAVEFTPPSEEAKTEEKEGKGKVCEETDTQVEKEDDLTDANVGET
ETTQIDGIHN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagcagaggacggagacaagatgaccagccagcaggctctgtgtgaccca
gatcaggggagcataaaacgccccggcatctccactctcaaattgtttatcatggcgctg
tccttcgcctgcttctcaaaggctctggcaggaacctacatgaagagctccatcactcag
attgagaggcgattcgacctctccagcacgcacgtcggactcattgatggcagctttgag
atgggcaacttgttgtttcttgctgtggtcagccatttcggggccaagctacatcggccc
agactcattgctgtgggctgtttcctcatggcggtcgggtccttcctcaccggcctgacg
catttcttcatgggacgctacaagtacaacacgatcattcaagttttccagaatgaaagc
atgaacatcgccgcctgtcgaaaaacagaagtactggaaattcagatcgagccctctgtg
gaagacaatgcaacatgtgagagggagtccggttccaacatgtggatctatgttttcctg
ggcaacgctctgcgagggatcggagaaaccccggtcacgcctctgggcatttcttacatc
gacgactttgcgagagcggaaaattcacccttctacatcgcatgtctccagactatcact
ctcctgggccccatgtttggtttcctcctgggctcctattgtgccaaactatatgttgac
attggatatgttgatattgaaagtgtgagcatcactccgaaagatgcccgctgggtgggc
gcctggtggatgggcttcatggtgtcctccgtcctcctcctcctctccagcattcccttc
tggttcctgccccgctcgctgccaaatcaggaggaagttaagggcaaactgactcctggc
tgtgacaccctcgatggggcggaggacgttcccaacaacaacaatcacaacctcaagctg
actgacatctctaaaggttttgttccctcactgaagcgcctgttgggaactccttcctac
ttcctgctcctttgtgggagcatcctgaagttcaactctttcattggcctgttcaccttt
aaagccaaatacatggaacaacagtttggacagtccgcatccagagcgaacttcctcatc
ggtatgttgaacctgccagcggtggcggtgggcatcttcctgggagggctgctgatgaag
aggtataagctgagcttagtgtcaggagctcagctctcttttgccacgtcctttatggcg
tacctccttctgctgctgcagtttggaaccaagtgtgataacatccccatggccgggctc
accgtctcatacaacgggacgcagagtgcatcatccgacagcgatatgctcttctcagag
tgtaacagagactgctcgtgttcagcggaggagtgggaccccgtgtgctccgacagcggc
atcacctacatctctccgtgtatggctggctgcttcagctccagtggatatggcaagaac
acggtcttcaacaactgcagctgtgtgtccgcctccctcccagcaggcagcagccggtcc
gtgaggctgggccagtgtcctcacgccgcagactgcggccgcagtttcaccgcctacatg
gctgtgtctgttctcagctccttcatcaactctctgggagctacacctggctacatggtc
atcatacgatgcatctcaccagatctcaaatcccttgcgctaggtatccaggccttagta
actcggactcttggtggacttcctgcacccgtgtatttcggagccctgattgattcaact
tgcctgaagtggtcaatcaagaagtgcgggggaatgggggcatgtcgcatttatgactct
aatatgtacaggatcatcttcctgggtctgatcactagtctcagtggatcctcgtatttc
ttcatcattgccgtcatcgtcctcctcagacgacagtttcgtgagccgcagagagagaca
caaacgcagaatagcaaagcttcagaaggaattgaccttcgaaccgcatcaaaacccacc
gaggacgatcccggcaaccctaaacctcccaaagtttgtatacggttcgcaacagaactg
gaggagggaggggaggttcacagaatagtgcagctctcacagattggccgactcagttcc
tcaaatatcaccggggagactcaacagctcaaatccctgacggagaccgctgtagagttc
actcctccaagtgaggaagcaaagacggaggagaaagagggaaaaggcaaggtttgcgag
gagacggacacacaggtggaaaaagaggacgatctcacagatgctaacgtgggagagaca
gaaacaacacaaattgacggcatacacaactaa
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