Pseudoliparis swirei (Mariana hadal snailfish): 130200301
Help
Entry
130200301 CDS
T09868
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130200301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130200301
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
130200301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
130200301
NCBI-ProteinID:
XP_056280435
LinkDB
All DBs
Position
10:9184124..9203325
Genome browser
AA seq
682 aa
AA seq
DB search
MSIEAQKTRAAFCSNLKLFLASLASVYFAKAFGGAYMKSSITQIERRFDIPSSLIGVIDG
SFEMGNLLVIAFVSYFGAKLHRPRLIAIGCVIMAAGSYLMALPHFFQGLYKYETSVSHAT
NTNSTESLLPCLSNHSLADETPDLEAITACEKASGSSLWIYVFLGNMLRGIGETPIMPLG
VSYLDDFSKEENTPFYLACIHTVGILGPMFGFMLGSYLAKVYVDIGSVDLDSITINYKDS
RWVGAWWLGFIVTGTVILLASIPFWFLPKSLPKQGQEQSHSTGTELATTAEQENFLGDEN
QDQEEKPVSLKELAKDFVPSLRRLFKNSIFTMMVLTYLVSVNGFIGMITFKPKYMEQAFG
QSASRAILLIGILNLPAVALGIITGGLILKRFKLGVIGAARVSIAASVGSLCLLFIQIFI
SCDMAEVAGLTVSYQGDSQVSYSQQTLLSQCNMGCSCSVKHWDPVCAHNGVTYASPCLAG
CQTSTGIGKDMMFHNCTCVGETMTPAINMSAELGQCPRGNNCENIFKIYMALSVLGSFIS
ACGGTPGYIVLLRSIQKDLKSLALGMQTLIVRTLGGIPPPIYFGALIDRTCLKWGTKQCG
GRGACRFYDADKFRMTFLGLITGLYFLSNLLWGGLYFIIVKRHKKLALRDQAKENGVEGD
SVGNGHAHIVIKKDDAGNESTI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagaggcccaaaaaacacgtgcagcgttctgctccaacctcaagctcttcctg
gcctcattggcatctgtatacttcgccaaagcctttggtggagcctacatgaagagctcc
atcacccagatcgagagacgctttgacatccccagctccctcattggggtcattgatggc
agcttcgaaatgggtaacctcttggtgatcgccttcgtgagctacttcggcgctaagctc
caccgtccccggctgattgctatcggctgtgtgatcatggctgctggatcttacctcatg
gccctgcctcacttcttccagggactgtacaagtatgagaccagcgtgtctcacgccaca
aataccaacagcactgagagcctcctgccctgcctgtccaaccacagcctggcagatgag
acgcctgatttagaggccataacggcttgtgaaaaggcgtccggctcgtctctgtggatc
tacgtcttcttgggaaacatgctgcgtggcattggagagactcccatcatgcctctgggt
gtgtcctacctcgacgacttctccaaagaagagaacactcctttctatttggcctgcatc
catacagtgggaattttaggccctatgtttgggttcatgctcgggtcctacctggccaag
gtctacgtggacatcgggtctgtggatttagacagcatcaccatcaactataaggactcc
cgctgggtgggggcctggtggctgggcttcatagtgactggcaccgtgatcctgctggcc
agtatcccgttctggttcttgcccaagtctttgcccaaacaggggcaagagcagagccac
agtacgggcaccgagctcgccacaacagcggagcaggagaatttcctcggagacgaaaac
caggatcaggaggagaagccagtttccttaaaggagctggctaaagattttgtgccgtcc
ctgaggaggctcttcaagaacagcatcttcacgatgatggtcctcacgtacctggtttcc
gtcaacggcttcattggcatgatcaccttcaagccaaagtacatggagcaagccttcggc
caatcggcctccagggccattttactcataggcatactgaacctgccagcagtagctttg
ggaatcatcaccggaggcctcatcctgaagcgcttcaagctgggtgtcatcggagcagcc
agggtgtcaatcgccgcctccgtcgggtccttgtgtctgctcttcatccagatcttcatc
tcttgtgatatggccgaggtggcaggtctgactgtgtcctatcaaggggattctcaggtg
tcctacagccagcagaccttgctgtcccagtgcaacatgggctgctcctgctcagtgaag
cattgggacccagtgtgcgcccacaacggggtaacgtacgcctcgccttgcctggctggc
tgccaaacctccaccggcatcggcaaggacatgatgtttcataactgtacctgcgttgga
gagacgatgactccggccatcaacatgtctgcagagctgggccagtgccccagggggaac
aactgtgaaaacatattcaaaatctacatggctttgtccgttttggggtctttcatttct
gcctgtgggggtacgccgggatacatcgtactgctcaggtccatacagaaagacctgaag
tcactggctttgggtatgcagacactaatagtgagaactttgggtgggatacctcctcca
atatatttcggagcactgattgaccgaacctgcttgaagtggggcaccaagcagtgtgga
ggccggggagcatgccgcttctatgatgctgataagttcagaatgacattcttgggcttg
atcacgggactctacttcctatccaacctgctctggggaggcctctatttcataattgtc
aagagacacaagaagttagcgctgagggatcaggccaaagaaaacggagtggagggcgac
tcggtgggcaacggacacgcacacattgtcataaagaaagacgatgcaggcaacgagagc
actatttaa
DBGET
integrated database retrieval system
