Pseudoliparis swirei (Mariana hadal snailfish): 130200302
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Entry
130200302 CDS
T09868
Symbol
ptprz1b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130200302 (ptprz1b)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130200302 (ptprz1b)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130200302 (ptprz1b)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130200302 (ptprz1b)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Others
130200302 (ptprz1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
GUN4_N
PTP-NADK
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
130200302
NCBI-ProteinID:
XP_056280437
LinkDB
All DBs
Position
10:16868298..16922103
Genome browser
AA seq
1417 aa
AA seq
DB search
MAVPRTESFISRLLLFSQIVVAAEPLVRGLRKLPEDIDWSYSGALNQHSWGRKYPSCNSA
RQSPVDIDETFTQVRLQYQDLQLEGWDKLTAESSTVHNNGKTVALRVEGDFFVSGGGLSS
RFRVGTITFHWGHCNATSDGSEHSLNGMKYPLEMQVFCYDPDDSRSLDAAVREGGRIAAL
AVLFEVSYEDNESFGPVIDAVNTVSRFDKRGSMEAFTLRSLLPNNTDKYYIYNGSLTTPP
CSETVEWIVFKHTVAISEKQLEVFCEVMTLEQAGYAILTDYLQSNFREQQQQFTGQVFAS
YTGVEDVLTPTCSSEPENVQADAQNDTTVVVTWERPRAVYDTTIDWYTVTYQRLQGREQQ
EYRTDGDQDVGAIIPGLLANGSYVVQVIAVCTNGLKGRRSDQIVVDMPLEEPEGDPGPDI
ATKELHGGLELSAKVKSENQNPLGPSLEDHSPVEQIPVEQTRVYQNQRSHHQNLPPEVAP
ETPPPESVVRTRPENHGGEKRAGRSGAEPDAEDQNWIYEDGVPTRVPPFAREGFDGNGAI
WVGEVTEQPGFLFPVARTTTLPTTRRRIVEGASPRQSADQGQPNQDQDQDQDQDQGIGPP
SPESALYPPLVEDVFYEDAASSSPLEPAASAETGSAAAAVLPGARVDRVSPPSTEGGDVS
ANRPDTIGSVASTPSPPTHSPPTPSPTTPNTLAQSVYKSSTTSSLLRVLMHTTQPMFNEG
SNSSHESRVGLVGGVDREKRTVVPLAVVSTLTILCLLVLVGILVYWRNCVQAAHFYPDES
TSPKVISAPSTPLLLATDGHEPLTVKQFVKHVMELHAANSFCQEFEIVKDSYEEVQACTV
DTGIAADSSNHPDNKCKNRYINILAYDHSRVKLSNSLDRDGKCGDYINANFVDGYERTGA
YIAAQGPLRHGREDFWRMIWQQNVGVIVMITNLKEKGRTKCDQYWPQESQEDYGPYHVTL
RSSRTLAYYTLRTFTVRDTSNEACPRRVEHTVHHYHYTQWPDMGVPEYTLPVLSFIRASS
RARTEEMGPVLVHCSAGVGRTGTYIVIDSMLQQIQDQGTVNVLGFLKHVRTQRNFLVQTE
KQYVFIHDTLVEAILSRGTSVTSDLLHTYVSDLLTPGASGRTRMDKQFKLISQRQAKHAD
YSTALRDGNAERNRARALMPVERSRVCLTTSEANSTGFINASYVMGHQHSKEFIVSQTPL
SSTVADFWRMIWEHSTNTVVRLPDTHCQSGDRKSCVYCPIKDQPMSFEGFTVSYLGEEHV
YLSNEERLLVQDFVVESPQTVLEVRQYSAPCWPNPDSPIRNSFDLVSAVREHSRHPDTPT
IIHDPLGGATSGLFCALTVLSSQLEEDGAVDVYQVARMTNLMRPGVFNDIEQYQYLYRAV
LSLVSSQEDQRALQSPETNGSVPLGQTNIAESLESLM
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgccccggaccgagagcttcatctcccggcttctcctcttcagccaaatcgtc
gtggcagcggagccgctggtccgaggcctgaggaaactccctgaagacatcgactggtcg
tactcaggcgccctgaaccagcacagctgggggaggaagtacccgtcctgtaacagcgcc
aggcagtcccccgtggacatcgacgagaccttcacccaggtcaggctgcagtaccaggat
ctgcagctagagggctgggacaagctgacggcagagtccagcaccgtccacaacaacggc
aagaccgtggccctccgcgtggaaggagacttcttcgtgagcggaggagggctgagctcc
aggttccgcgtcggtaccatcaccttccactgggggcactgcaacgcgacgtccgatggg
tctgagcacagcctgaacgggatgaaataccctctggagatgcaggtcttctgttacgat
ccagacgactcccgaagtctggatgccgccgtcagggaaggagggaggatcgccgccctg
gccgtgctctttgaggtcagctatgaggacaacgagagcttcggacccgtcatagacgcc
gtcaacaccgtcagcaggtttgataagagggggtcgatggaagccttcaccctgcggtcc
ctgctgcctaataacaccgataaatactacatctacaacgggtccctgaccacaccgccc
tgctcggagacggtggagtggatcgtcttcaaacacactgtggccatatcagaaaaacag
ttggaggtgttctgcgaggtgatgaccttggagcaggccggctacgccatcctgacggat
tacctgcagagtaacttccgggagcagcagcagcagttcacgggtcaggtgttcgcctcg
tacaccggcgtggaggacgtgctcacgcccacctgcagctcggagccggagaacgttcag
gccgacgcccagaacgacacgaccgtggtggtgacgtgggagcggccccgcgccgtctac
gacacgaccatcgactggtacaccgtcacgtaccagaggctgcagggccgagagcagcag
gagtaccggaccgacggggaccaggacgtgggcgccatcatccccggcctgctggccaac
ggcagctacgtggtgcaggtcatcgccgtctgcaccaacggactgaaaggacgacgcagc
gaccagatcgtagtggacatgccgctagaagagcctgaaggtgatccgggtcctgacatc
gccactaaagagctacacggcggcctggagctctcagccaaagtcaagtcggagaaccag
aacccgttgggtccgtctctggaggaccacagccccgtggagcagatccccgtggagcag
accagagtttaccagaaccagcggtcgcaccaccagaacctcccgcccgaggtcgccccg
gagactccgcctcccgagtccgttgtgagaacccgacccgagaaccacggcggggagaag
agggcgggccggagcggcgccgaacccgacgccgaggaccagaactggatttacgaggac
ggcgttccgacgcgcgtcccgccgttcgccagagagggattcgacggcaacggcgccata
tgggtcggcgaggtcaccgagcagccgggcttcctgtttcctgttgcccggacgacgacg
ctgccgacgactcgccgacgaatcgtagaaggggcgtcgccacgtcagtctgcggatcag
ggtcaaccaaaccaagaccaggaccaggaccaggaccaggaccagggcatcggccccccg
tcccctgagtcagctctctacccccctctagtggaggacgtcttctatgaagacgcagcc
agcagctctccactagaacccgccgcctctgcagaaacaggctctgctgctgctgctgtg
ttgccaggggctcgagtggacagagtgtccccgccgtccaccgagggcggcgacgtctcc
gcgaaccgaccggacaccatcggctcggtggcctccaccccctcgcccccgacccactca
ccccccaccccctcgcccaccacccccaacaccctcgcccagtcggtctacaaatcatcc
accacctcctcgctgctccgggtgctgatgcatacaacccagcccatgtttaacgagggc
agcaacagcagccacgagtctcgggtggggctggtcggaggcgtggaccgggagaagcgg
acggtcgtccctctggctgttgtctccaccctcaccatcctctgcctgctggtgctggtt
ggcatactggtctattggagaaactgtgtccaggcggctcacttctatccagacgagagc
acgtcaccgaaagtcatatcagctccatccacacccctgctgctggccactgacggccac
gagccgctgaccgtgaagcagtttgtgaagcacgtgatggagctgcacgccgccaacagc
ttctgccaggagttcgagattgtcaaagattcctacgaggaggtgcaggcgtgcaccgtg
gacacgggcatcgccgcggacagctccaaccaccccgacaacaaatgcaagaacagatac
atcaacatcctggcctacgaccacagcagagtcaaactctccaacagtttggaccgagat
gggaaatgcggagactacatcaacgctaactttgtagacggttatgagcgaaccggggcg
tacatcgcggctcaggggcccctcaggcacggccgggaggacttctggaggatgatctgg
cagcagaacgttggagtcattgtcatgatcaccaacctcaaggagaaaggacggactaag
tgtgaccagtactggcctcaggagagccaggaggactacggcccgtaccacgtgaccctg
aggagcagcaggaccctcgcctactacacactgcgcacattcaccgtcagggacacctcc
aatgaggcgtgtccgaggagagttgaacacaccgtccaccattaccactacacccagtgg
ccggacatgggcgtcccagaatacaccctgcccgtgctgtccttcatcagagcctcgtcc
cgggcccggaccgaggagatgggacccgttctggtgcactgcagtgccggtgtaggaagg
acaggaacctacatagtgatcgacagcatgctgcagcagatccaggatcagggtacggtg
aacgtgctcggcttcctgaagcatgtgcggacgcagaggaacttcctggttcagacggag
aagcagtacgtcttcatccacgacactctggtggaggccatattaagccgtggcacctcg
gtgacctctgacctcctccacacgtacgtgtctgacctcctgacccctggggcgtcgggc
aggacgcgcatggacaaacagttcaagttgatcagccagcgccaggcgaagcacgcggac
tacagcaccgccctgagggacggcaacgccgagaggaaccgggccagagctctgatgccg
gtggaacgatcaagagtctgtctgaccacttcagaggcgaactccaccgggttcatcaac
gcctcctacgtcatgggacaccagcacagtaaggagttcatcgtgagccagacccctctg
agcagcacggtggccgacttctggaggatgatctgggagcacagcaccaacactgtggtc
cgtctgcccgacacacactgtcagagtggagacaggaagtcgtgtgtttactgtcccatt
aaagaccagccaatgagctttgagggtttcactgtgtcctatttgggggaggagcatgtg
tatctgtccaatgaggagagactgttggtgcaggacttcgtagtggagtctccacagact
gtgttggaggtgcgtcagtacagcgccccctgctggccgaacccagacagtcccatcagg
aacagttttgatctggtcagcgcagtgcgggagcacagcagacatccggacacacccacc
atcatacatgacccgttgggaggtgctacttcaggcctgttctgcgccctcaccgtcctg
tccagtcagctggaggaggacggagcggtggacgtttaccaggtggcccggatgaccaac
ctcatgaggcctggcgtctttaatgatatagagcagtaccagtacctgtaccgagcggtg
ctgagtctggtgagcagccaggaagaccagagggccctgcagagtccagaaaccaacggg
tcggtaccgctgggccagactaacattgctgagagcctggagtcgctgatgtag
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