Pseudoliparis swirei (Mariana hadal snailfish): 130200363
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Entry
130200363 CDS
T09868
Symbol
ptprb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130200363 (ptprb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130200363 (ptprb)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130200363 (ptprb)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130200363 (ptprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
TcfC
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
130200363
NCBI-ProteinID:
XP_056280553
LinkDB
All DBs
Position
10:complement(1160783..1194134)
Genome browser
AA seq
2002 aa
AA seq
DB search
MMTCNALGCLWFTSLLLLPGPSGGTPSKSTRCSISVSGPVSGLDSVSVTVRTPGTNCSFN
VSSQDGGAEGAECRRRGGDEEERADEGRGRERGEEEEEEAGADYLGTDRLGVEEGGNKDG
ASKEGGNKEGGNKEGGQVFTCVMDQLEPGTSYQLEIQSHRDQETGNITMHTRPSAVSDLS
VTSRTSSSLALSWQAGPGRTQRFRLQLWDHTGLLRNQTLESTATQHTLTDLTPGRLFNIT
MVTEAGGLQNSQTTSGQTGPAPVANLTVVHGNSTSLLLSWQRPDGDLDTLIVALSTNGTA
SWMATLLPNVTEVAVDQLTPGSAYQVEVTSRSGPLTSQSEFTVRTGPAAVSFLSLSPSSS
SSGGLLLSWSPPAGQWESYRLLLFDGSQQLVSAALDREAVDFLFPGTRLTPGRRYRAALR
VESRGGTAESRCEGQTAPAAVSDLHVRHADETSLSAMWSHAPSGSRDSYFLTIRHGKVTV
DTRSVEPNMRECTFNVLTPGRKYTVTVTTRSGNLNTSVSLEGRTVPMALRVITLRSSGVR
CLQASWEKPPGDVDLVSLTLLQDSVVIQNHSVPIASSSLLLGGLTPGALYRLQAATVSGE
LQSESTGLEARTAPASVSEVAASNGGRSDVLRVTWRPAAGVVDGYTVRLLDGPRTVHALA
VSRSSPPECSFSSLVAGRLYAVVIVSRSGGLENATAVQARTQPVTVQNPTAVHSGRDDFL
KVYWRHAAGDLDRYVVLIRYNNSVLQNQSVSAGHNECVFSSLLPGRLYTVTVETWSGDYV
SSISTDGRTFPAAVGNLSLCSAGTGELSVTWSPAPGDMDHYEVTLLFNDTRVFPPVALGS
AARRHRLTSLTPGRLYKIVVSTFSGPNQRALFIEGRTGPSAVGNLHLAPQAGLTDSVGGL
LASWTPGDGDLDMYIVSLSTADGGVIETRPVPKHVSSLDFLELTPGHAYAITVQSLSGKL
INGNTAVGRTAPARVTALQADNDHTTHSLTASWERPVGAYDGYSLQLLDEAGALLANRSV
PAESRSERFEGLTSGRWYGVKVATLSGGVASPSVAAEGQTRPAAVGNLTATSSNTSSLAF
SWRPSQGHVDLYHLSLFGVEEATANHRPEAAGSRKEPAALQKVGPAADGCVFSGLRAGSL
YRLRVVSWSRDMSSDTSLTARTVPSAVSSLEVQSSGQTDRLSVSWRPGEGSWSHYQVLLS
DGSGSSLGAQMLGAEHESHMFSGLVPGRLYRAEVITHSGELTNHVSASGRTAPEPPTHLS
VKRGPTNHTMELSWSGPASGDYDGFGLQWTPPDRLSVTRTLLTGRVLGGMFPGRRYNFTV
VTIGGGGAKGGATVQSQPIQRSVRTSPSPLRSLHCLPVSSSSLSCSWTSPLSDFDSYEVE
CRRHDDGDLTSALRLAAGVTAVTLDQLEAYMKYTVTVRVSSWGQTSPPETHTTITMIDRP
PVPPPSVRVGERSSKVTSSSILFRFNCSWFSDANGAVRHFTVIVAESEANELLQPEQRHP
LASYRDYTSNASVRAYQTAYFSSRCPQDADTSTGQVVEVNLGAGGDRLGGACDRYHDDDD
LYLSDSYGGFCDGPLKPKTSYRLSVRAFTRLFDENHREVPEPLFTDTYLSSPLRTHSEPL
GGVVEGLSAGMFLIGMMVAVVSLLVYRQRLRKVAVQENPVVRMSLWKDVPSSGSYLGVRS
NRRVTSPIKSSHFESHLNKLQADAHFLLSEEFEDLKDVGRNQTMDVARLPENRGKNRYNN
ILPYDSTRVKMSYLEDEPCSDYINASYVPGHNYRREYVASQGSLPGTKDDFWRMVWEHGV
HNVVMVTQCVEKGRVKCDQYWPADREPLYYGDLVVQMLSESVLPEWTIREFKITSERGCS
YPRVLRHFHYTVWPDHGVPDSTQSLVQFVRTVRDYVDRSPSTGATVVHCSAGVGRTGTFI
ALDRVLQQLDSKGTVDLYGCVFDLRLHRQHMVQTEVQYSFLHKCVRDVLRARKHRSEQEN
PLYPIYENINPEYCRDFVFTGR
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctgtaacgctctcggttgtttgtggttcacgtcactgctgctgctgccgggt
ccgagcggcggcaccccctcaaagtccaccaggtgcagcatctccgtgtccggaccagta
tccggtctggactcggtctccgtgaccgtcagaacccccggaaccaactgctccttcaac
gtctcctctcaggacggaggagccgagggcgcagagtgtaggagacgaggaggagacgag
gaggagagggccgatgagggcagaggaagggagcgaggagaggaggaggaggaggaggcg
ggagctgactacctggggacagaccggctaggagtcgaggagggagggaacaaggatgga
gcgagcaaggagggagggaacaaggagggagggaacaaggagggagggcaggtcttcacc
tgcgtgatggatcaactggagcctggaaccagctaccagctggagatccagtcccacaga
gaccaggagacgggaaacatcaccatgcacaccaggccctcggcggtcagcgacctctct
gtgacctccaggacctccagcagcctggctctgtcctggcaggccggcccggggaggacg
cagcgcttcaggctgcagctgtgggatcacaccggtcttctgaggaaccagacgttagag
agcacggcgacgcaacacacgctcaccgacctgacgccggggcggctgttcaacatcacc
atggttacggaggccggagggctgcagaacagccagacgacgagcggtcagacaggcccc
gcccccgtcgccaacctcaccgtcgtccatggcaacagcacaagcttgttgttgtcgtgg
caacggcccgacggcgacctggacaccctcatcgtcgccctctcgaccaatgggacggct
tcctggatggcgacgcttttgcccaacgtaacggaggtcgccgtcgatcagctgacgccc
ggctcggcctatcaggtcgaggtgacgtccaggagcggcccgctcacgagccaatcagaa
ttcaccgtcaggacaggtccagcggcggtgtccttcctctccctgtctccctcctcctct
tcctccggcggcctcctcctctcttggtcgccccccgctggccagtgggagagctacagg
ctgctcctcttcgacggctcccagcagttagtcagcgccgctctggaccgagaggccgtg
gacttcctcttccccgggacgcgactaacgcctggaagacgctaccgagccgcgctgaga
gtggagagcagaggagggacggccgagagccgctgtgaggggcagacagctccggccgcc
gtgtcggatctccacgtccgacacgctgacgagacctcgctcagcgccatgtggagccac
gccccctccgggtcacgtgacagctacttcctgaccatccgccacggtaaggtcaccgtg
gacaccaggtcggtggagcccaacatgagggagtgcaccttcaacgtgctcacacctggg
aggaagtacaccgtcaccgtgacaaccaggagcgggaacctcaacacctccgtgtccctg
gaggggaggacagttcccatggcgctgcgtgtcatcactctgaggagctcgggggtccgg
tgccttcaggcgtcgtgggagaaaccacctggagacgtggacttggtctcgctgaccctg
ctgcaggacagcgtggtgatccagaaccacagcgttcccatcgcttcttcttctctgctg
ctcggcggtttgacccccggcgccctctacaggctgcaggccgccaccgtcagcggagag
ctgcagtccgagagcaccgggctggaggcacggacagccccggcgtcggtctccgaggtc
gcggcctctaatggcggccggtcggacgtgctgcgggtgacgtggcgcccggcggccggc
gtggtggacggctacacggtgcgcctgctggacgggccgcgcaccgtgcacgcgctcgcc
gtgtcgcgctcctcgccgcccgagtgctccttcagctcgctggtcgccggccgcctgtac
gccgtggtcatcgtgtcgaggagcggcggcctggagaacgccaccgcggtccaagcgcgc
acacaaccggtcaccgttcagaacccgaccgctgttcactctggaagagacgacttcctc
aaggtgtactggcgccatgcggccggagacctggaccgctacgtggttctgatccgctac
aacaacagcgtcctgcagaaccagagcgtctccgccggacacaacgagtgcgtcttctcc
tcgctgttgccgggcagactctacaccgtcaccgtggaaacctggagcggggactacgtc
agcagcatctccaccgacggacgcacatttcccgcggctgtggggaacctgtcgctctgc
agcgcgggaacaggtgagctgtccgtcacctggagccccgcccccggagacatggaccac
tacgaggtaaccctcctcttcaacgacactcgcgtcttccccccggtggcgctgggcagc
gctgcgcggcgccaccggctgacctccctgaccccggggcgcctctacaagatcgtggtg
tcgaccttcagtgggccgaaccagagggccctgttcatcgagggccggaccggtcccagt
gcggtcgggaacctgcacctggctcctcaggccggactcacggactctgtgggggggctg
ctggcctcctggactcctggagacggagacctggacatgtacatcgtgtccttgtccacc
gcggacggcggcgtcatcgagactcgccccgtcccgaaacacgtctcctccctggacttc
ctggagctgaccccgggccacgcctatgccatcaccgtccaatcgctgagcgggaagctg
atcaacggcaacacggccgtcggcagaaccgctccggccagagtcaccgcgctgcaggcg
gataacgaccacaccacccacagcctgacggcgagctgggagaggcccgtgggcgcgtac
gacggctacagcctgcagctattggacgaggccggcgccctcctggccaatcggtcggtc
cccgcagagagtcgcagcgagcgcttcgagggcctgacgtcggggaggtggtacggcgtg
aaggtggccacgctcagcggcggcgtggcgtcgccgagcgtcgccgccgagggacaaacc
cgtccggctgcagtcggcaacctgaccgccacctcgtccaacacctcctcgctcgccttc
tcctggcgtccttcacaagggcacgtcgacctctaccacctgtcgctcttcggcgttgaa
gaggcgacagccaatcacaggccggaggctgccggcagcaggaaggagccggcggccctg
cagaaagtgggtccggctgcagacggatgtgttttctccgggctgcgagcaggaagtctg
tatcgactgagggtcgtgagctggagccgagacatgagcagcgacacgtcactgacggcc
agaacggtgccgtctgccgtgtcgtctcttgaggttcagagttcaggacagacggacaga
ctgtcggtcagctggcggcccggagagggaagctggagccactaccaggtgcttctctct
gacggctctggatcttctctgggagcccagatgctgggggcggagcatgagagtcacatg
ttctcggggctcgtccctggtaggctgtatcgcgctgaggtcatcacccacagcggggaa
ctgaccaatcacgtctctgcatccggacgcaccgctccggagccgcccacccacctgtcc
gtcaaacgaggcccgaccaatcacacgatggagctgtcgtggtctggccccgcctccgga
gactacgacggcttcggcctgcagtggactcctccggaccgcctgtccgtcactcggacc
ctcctgaccggccgcgtgctgggcggcatgttccccgggcggcgctacaacttcaccgtg
gtgaccatcggcgggggcggagccaaggggggagctaccgtccagagccagccaatccag
aggagcgtcaggacaagcccgtctcctctgaggtctctccactgcctccccgtctcctcg
tcctccctctcttgctcctggacgtctcctctctccgacttcgactcctacgaggtcgag
tgccgtcgccacgacgacggggacctgacctccgccctgcggctggcggccggcgtcacc
gcggtaacgctggaccagctggaggcgtacatgaagtacacggtgaccgtgagagtgtcg
tcatggggacagacgagtcccccagagacacacaccaccatcaccatgatagaccgtcct
ccggtcccgcccccgagcgtccgcgtgggcgagaggtcgtcgaaggtcacgtcgtcctcc
atcttgttccgcttcaactgctcgtggttcagcgacgccaacggagccgtgaggcacttc
accgtcatcgtggccgagtctgaggccaatgagctgctgcagccggagcagcgccacccg
ctggcctcctaccgcgactacacctccaacgcctccgtcagagcctatcagacggcttac
ttctccagccgctgcccacaggacgcagacacgtccaccggacaggtggtggaggtgaac
ctgggggcggggggtgaccggctgggcggggcttgtgaccgttaccacgacgacgatgac
ctctacctgagtgacagctacggcggcttctgtgacggaccactgaaacccaaaacatcc
tacaggctcagtgtgagagctttcaccagactgtttgatgagaaccaccgagaggttccc
gagccgcttttcacagacacttacctgtcctcaccgctcaggacacactccgagccgcta
ggcggcgtggtcgagggtctgagtgccggcatgttcctgatcgggatgatggtggccgtc
gtctctctgctggtgtacagacagcggctacgcaaagtggccgtccaggagaacccggtg
gtgaggatgagtttgtggaaagacgtcccgtcttcaggatcgtatctcggcgtccggagc
aatcgacgagtcaccagtcccatcaaatcgagtcactttgagtctcacctcaacaagctg
caggccgacgcccacttcctgctgtctgaggagttcgaggacctgaaggacgtcgggaga
aaccaaacgatggacgtcgctcgactgccggagaaccgaggaaagaaccgctacaacaac
atcctgccatatgattctactcgtgtgaagatgtcgtacctggaggacgaaccatgttct
gactacatcaacgccagctacgtacctggtcataactaccgtagggagtacgtggcgtct
caaggttctcttcccggcactaaagatgatttctggcgcatggtgtgggagcacggcgtg
cacaacgtcgtcatggtgacgcagtgcgtggagaaaggacgggtgaagtgtgatcaatac
tggcctgcagaccgggagccgctgtactacggagacctggtggtccagatgctgtcggag
tccgtcctgccagagtggaccatcagggagttcaagataacctcggagagaggctgcagt
tacccaagggtgctgcgtcacttccactacaccgtgtggccggaccacggggtgcccgac
agcacccagtccctggtccagttcgtcaggacggtccgggactacgtggaccggagcccc
agcaccggggccaccgtggtgcactgcagtgctggtgttggccgtacggggaccttcatc
gcgttggatcgggttctgcagcagttggactctaaaggaaccgtcgacctctacggctgt
gtgttcgacctccgtctgcaccgtcaacacatggtccagactgaggtgcagtactccttc
ctgcataaatgtgttcgcgacgttctcagagccagaaaacatcgcagtgagcaggagaac
cctctttacccgatctacgagaacatcaacccagagtactgccgcgacttcgtgttcact
ggacgctga
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integrated database retrieval system
