Pseudoliparis swirei (Mariana hadal snailfish): 130200364
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Entry
130200364 CDS
T09868
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3-like isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
SAM_2
Ank_3
PDZ_6
Ank_5
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
130200364
NCBI-ProteinID:
XP_056280556
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All DBs
Position
10:1350433..1385831
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AA seq
1790 aa
AA seq
DB search
MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDADDTPPGNSIVVRIGIPDLQQTKCLR
LDSELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLNEYPLPPITPI
PYLEFRYKRRIYTQSYVDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHD
ADTGECPLTLAVQLEGSGDLIKVLRSGGAHLDFRTRDGITALHRAVLCRNSASLSTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGMTDENGWQEIHQACRYGNVQH
LEHLLFYGADMCSQNASGNTALHLCALYNQDSCARVMLFRGANKDIKNYNNQTAFQVAII
AGNFELAEIIKIHKNSDVVVPFRETPSYTTRRRAVLSSSGNGLSSPRSLIRSANENVLES
PASSPGPSLQSLETHHDTHTHSLRRHTRRLSPSAGGPVEASPPSSPPATPQTTKRRLYSA
VPGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEGGFWEGSVKGRTGWFPADCVEEVQM
RQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKTAVLQKKESEGFGFVLRGAK
AETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGADVVKVGHRQVVSLI
RQGGSRLLMKVVSVSRKSETNMVRKKAPPPPKRAPSTSLTLRSKSMTADLEDIARRRRFD
KLDEMLAGGQQEVVLRARPSDDFRAATVKQRPTSRRITQAEINSLFERQGLVPPAAPEKS
TMALPRGMSRTKSFGTPDDDRISALINESRFPRSSSLTDSFIPPPPQMAPPPPPSASSST
SSLFLLDSGPPPSFLPPSPPARGDGLTRSSFKPGAEPRLQELTDSPTRIQAHAERQRKAR
SMIILQDTPPQLQPDAQGAAPHALHTATHTATHTTATHAATPTATHTATHTATHTTATHT
TATHAATHTATHTATHTTATHTTATHAATHTATHTTATHTTATHAATHTATHTATHTATL
SLHTTSPALGHSPLSRRRGRPIENPYANVGHQAPPSKPQRRKSPLLKQLPVEEQGVKELD
LLRVDETSSPSRAELYQQQVLSDRARVQGRRSSLFLSVEGSGSENQAPPLLTLSHSMDDL
GELPPPAPVLSPSPTPHTFLHPLTGKPLDPSSPLALALAARERALTARTPSPEPRLKHIS
ASTTPILTPAASPEGRHKRAPRITPQSSPEPRSKRTLPQTSPEQRTKRTTPQSSPELRHK
RVTPPLFPDGQVERPETEGGVTSPAGPSPERWRPTPLPPLANESHPALIDRRRSLTVGSS
EEEGGAYTVTLPPALLSSSDEETREELCRIGLVTPPAAFASPPALPPPSSLTLLPRRGGE
GGGVESGSDSASRRGDEEEGGDERLHDSSSPSSLPPSITLASPPGPSSPSSPLATHPSPA
SPSGFKPCLRSPVGRGRSALRDPLLKQSSDSELLPSAASCSSPSSPLCSSPTGGGGRQPR
YLFQRRSKLWGGGDDRDERRGFGPDEGGRPAALGGQVSGSAVDLSSRSILELRGRSGLDL
ANRLQLLNKDSHSLGEEPSPLDPGRRSPVGGARLFSSLGELHTISQRGFCSSYTVRPGSR
YPVTRRSPSPSPCPSDRSIGHTSSTAPCSERPDLSSGRGLTILKSSSLSLPSEPKEVRFV
MRSASARTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRPLNLWNKYDVGDWLESVGLA
EHRQRFQEHEIEGSHLPALTKEDYVELGVTRLGHRINIERALRQLLDGST
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacactaaacatgatcgcccacggcaacaggcggttact
aacggcaacccgacaggctctgctgttgccagggacgacgacgcggatgacacgccccct
ggaaacagtattgtcgtccgcattggcatcccagacctgcagcagacgaagtgtttgcgg
ttggactcagagctcccggtgtggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgcgccgga
aagtttctggacgaggagcgtctgctgaatgagtatcctcttccccccatcacaccgatc
ccatacctggagttccgttacaaacggagaatttacacgcaaagctacgtggacgataag
cagctggcaaagctgcataccaaggcaaacctgaagcgttttatggaacatgttcaccag
aagaatgtggagaaggtttccaaatggttggaaaagggcctggaccccaacttccacgac
gccgacaccggggagtgtcccctgacgctggcggtccagctggagggcagcggggacctg
atcaaggtgctccgcagcggaggagcccacctggacttcaggacccgagacgggatcacc
gcgctgcaccgggccgtgctctgcaggaacagcgcctctctcagcaccctcctggacctc
ggggcgtctccggactacaaggacagccggggcctgacccccctgtaccactccgccatg
gtgggcggcgccccctactgctgcgagctgctactgcaggaccacgccaccatcgggatg
actgatgagaacggctggcaggaaatccaccaggcatgtcgctatggtaacgtgcagcac
ttggagcacctgctgttctacggcgctgacatgtgttcccagaatgcatctggaaacacc
gcactgcacctctgtgcgctctacaaccaggacagctgtgccagagtgatgctgttcaga
ggagccaacaaggacatcaagaactacaacaaccagactgccttccaggtggcaataatt
gctgggaactttgagcttgcagaaatcataaaaatccacaaaaactctgacgtcgtagtt
cccttcagagaaactccgtcctacacaacgcgccgccgggccgtcctgagcagctcgggg
aacggtctgtcctctccgcgctctctgattcgctctgccaatgagaacgttctggaaagc
cccgcctcctctcctggcccctccctccagagcctggaaacgcaccacgacacgcacaca
cattcgctacgacgacacacgcggcgcctcagccccagtgctgggggcccggtggaggcc
agccccccctcgtcccctccagcgaccccccagacgacgaagaggaggctgtacagcgcc
gtgccgggacgcaccttcatcgccacgcggtcccacgtcccccaggggcccggagagatc
cagctgcaccgcggggagagggtcaaagttctctccataggagaaggaggattctgggaa
ggaagtgtgaaaggaagaaccggctggtttcctgccgactgcgttgaggaagtccagatg
agacaatacgacccgcgactggaaacgagggaggaccgcacaaagaggctgttcagacat
tacactgttggttcctatgacaactacacctcctacagtgactacgtgatcgaggagaag
acggccgtgctgcagaagaaggagagcgagggcttcggcttcgtcctccgaggagctaaa
gccgagacccccatcgaggagttcgcccccaccccggcgttccccgccctgcagtacctg
gagtcggtggaccaggggggcgtggcctggagggcggggctacggaccggagacttcctc
atagaggtgaacggcgccgacgtggtgaaggtgggtcaccggcaggtggtctccctgatc
cgccaggggggcagccgcctgctgatgaaggtcgtgtccgtctccaggaagtctgaaacc
aacatggtccgcaagaaagctccgccccctccaaaacgagcccccagcacgtcgctgaca
ctccgatccaagtcaatgaccgctgacctggaggacatagccaggaggaggcgcttcgac
aaattggatgagatgttggctggaggtcaacaggaagtcgtcctcagggcgcggccgtcg
gacgacttcagggcggcgacggtgaaacagcgaccgacgagccggcggatcacacaggcg
gagatcaactcgctgttcgagcgtcagggtctcgttccgcccgccgcgcccgagaagagc
accatggcgttacctcgagggatgtccagaaccaagagctttggcacacctgatgacgac
aggatctcagctctcatcaatgagagtcggtttccacggagctcctcgctgacggacagc
ttcatccccccgccccctcagatggctccgccccctcctccctccgcctcctcctccacc
tcctcgctcttcctcctggactccggcccgcctccatccttcttgcccccttctcccccg
gcccgaggggacgggcttacccgctctagcttcaagccgggggcggagcctaggctccag
gagctcaccgattcgccgacgaggatccaagcccacgccgagcggcagaggaaggcgagg
tcgatgataatcctgcaggacacgccgccgcagcttcagccggacgcgcaaggcgcagca
ccgcatgcgctgcacaccgccacgcacaccgccacgcacaccaccgccacgcacgccgcc
acgcccaccgccacgcacaccgccacgcacaccgccacacacaccaccgccacgcacacc
accgccacgcacgccgccacgcacaccgccacgcacaccgccacgcacaccaccgccacg
cacaccaccgccacgcacgccgccacgcacaccgccacgcacaccaccgccacgcacacc
accgccacgcacgccgccacgcacaccgccacgcacaccgccacacacaccgccacgctg
tctctccacaccaccagccccgccctcggccactcaccgctgtcacgccgccggggccga
ccaatagaaaacccgtacgctaacgtgggacatcaggctccgccctccaagccccagagg
aggaagtcgcctttgttaaaacaacttcctgtcgaggagcaaggagtgaaagagctcgac
ttgttgagagtcgatgaaaccagcagcccgagtcgggcggagctttaccagcagcaggtt
ctttcagatcgcgctcgcgttcagggtcggaggtcgtccctcttcctgtcggtggaggga
tccgggtcagagaaccaggcgccgcccctcctgactctaagccattccatggacgacctc
ggcgagcttccgccaccagctccggtcctgtcgccgtctccgacgcctcacaccttcctc
cacccgctgacggggaagcctctagacccttcatctccactcgccttagcgcttgctgca
cgcgaacgagcgctcactgcccgcacgccgagcccagagccgcgactaaagcacatatcg
gcctccaccacacccatactgaccccagctgccagccctgaaggcagacacaagcgggcc
ccccgcatcaccccgcagagtagccccgagccacggtccaaacgcaccctccctcagacg
agtcccgagcaacgaaccaagcgcaccactccccagtccagtcctgagctgaggcataaa
cgcgtaactccgcccttgttccctgatggacaggtggagcgtccagaaacagagggagga
gtcacgtcaccggccggcccctcccctgagcgctggagacccacccccttgccaccgttg
gccaatgagagtcaccctgctctgattgacaggcgcagaagcctcacggtgggcagctca
gaggaggagggcggggcttacacagtaacactccccccggcgttgttgtcgtccagtgat
gaggaaactcgggaggagctttgcagaattggcctggtgactccacccgctgccttcgcc
agtcctcccgctcttcctcccccatcctccctcaccctgttgccacggcgagggggcgag
ggagggggagttgagagtggttctgactccgcgagtagacgaggagatgaggaggaaggc
ggtgacgaacgactccacgacagctcctccccaagctcacttcctccctccattaccttg
gcctcccctcctggtccttcctccccctcctcccctctggctactcatccttcccccgcc
tccccgtctggtttcaagccttgccttcgctcccctgtcgggcgtggccgctctgcactg
cgtgacccgctgctgaagcagtcgtccgacagtgagctcctcccgtccgccgcgtcctgc
tcctccccttcctccccactctgctcctcccccaccgggggcggtgggcggcagccacgc
tacctgttccagaggaggtcgaagctgtggggcggcggggacgaccgcgacgagcgtcgg
ggcttcggcccggatgaagggggccggccggcagctctgggagggcaggtgtcggggtcg
gccgtggatctcagcagccggtcgatactggagctgagaggcaggtccggactcgatctg
gccaatcggctacagctgctaaacaaagacagtcactctcttggggaagagccgagtcct
ctggatccgggccggaggtccccagtcggaggagccaggttgttctccagtctcggggaa
ctccacaccatctcccagcgaggattctgctccagctatacggtccgaccagggagccgc
taccccgtgacccgccggagcccctccccctctccctgcccgtccgataggtcaataggg
cacacctcctccaccgccccctgctctgaaaggccagacctgagctcgggccgcggtcta
accatcctgaagtcgtccagcctcagcctcccctcggaaccgaaggaggtccgctttgtg
atgcgtagcgccagcgcacggacccggtcccgctcgccctccccttccccccacgcctcc
ccctgcccctccccggtcctcagcgggcccctgctggccctccggccctggaggcagcgg
cccctcaacctgtggaataaatacgacgtgggcgactggctggagagcgtgggcctggcc
gagcaccgccagcgcttccaggagcacgagatcgaaggctcgcacctcccggctctcacc
aaggaggactacgtggagctgggcgtcaccagactgggacaccggatcaacatcgagagg
gcgctcagacagttgctggatggttccacttga
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