Pseudoliparis swirei (Mariana hadal snailfish): 130200370
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Entry
130200370 CDS
T09868
Symbol
ptprr
Name
(RefSeq) receptor-type tyrosine-protein phosphatase R isoform X1
KO
K04458
receptor-type tyrosine-protein phosphatase R [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130200370 (ptprr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130200370 (ptprr)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130200370 (ptprr)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130200370 (ptprr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Tc-R-P
DSPc
PTP-SAK
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
130200370
NCBI-ProteinID:
XP_056280582
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All DBs
Position
10:complement(1195381..1221304)
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AA seq
680 aa
AA seq
DB search
MSCRRGRGARLTMFLFWCLTCTRPLVTGSSSVDHELRLFPSRRPPPPPDLRHHLHHHHLH
HHHLHHHHLHHHHLYHLHHHLHQRPAGFAKVVPAALSEPRPPHAAVSARHLLTVYLAVDV
RRLNVSLLRWFREGVAAALGVPTGHVHINRLNEKKNGIELFVSSDRPGVSEPRPAEEVIQ
SLNVRVLHRHLGHFGITEVSTEENVLQGEHRDHVWGGEGFYTGLLFVTIFIIIIITCLMV
LYRLKEKVQVSDRQLKAPPPDLHLTPTVHLDSAQRLKGTKVSGSMVQAERPPTVATPIRQ
QQPIIACRRLAPLPVVPLPSSAPVFNSQDHAPLAVTANSELKICPSPFRMKPAARLQERR
GSNVSLVLDMSALGAVEPLNVAVATPREAAAREYLQAAGRPLTRRQLRDVVNNAHKLHAE
FAEIPMNFIDPKELDIPNHGTKNRYKTILPNLHSRVILKTKTSDPLSCYINANFIRGYLG
NERAFIATQGPLVNTVNDFWTMVWQEETPAVVMITKLKERNEKCVLYWPERRGIYGKVEV
LVNGVRETEHYTTRCLTLKCGDQTRELQHFWFTSWPDHKTPDATAPLLQLVEDVEEERRA
RDTSGPVVVHCSAGIGRTGCFIATTIGCRQLQLEGAVDVLSVTCRLRADRGGMIQTGEQY
EFVHHALSLYEARLSAETGQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaggagaggaagaggagcgcgcctcaccatgtttctcttctggtgtctcacg
tgcacgcggccgctggtcacaggatcgtcgtctgttgaccatgagcttcgtctcttcccg
tctcgtcggcctcctcctcctcctgacctgagacaccacctccaccatcatcacctccac
catcatcacctccaccatcatcacctccaccatcatcacctctaccatcttcatcatcat
cttcatcagcgtcccgccggcttcgccaaagtggtgcccgccgccctctcggagccccgc
cctcctcacgccgcggtgtcggcacgccacctgctgactgtgtatctggctgtggatgtg
aggaggctgaacgtcagtcttcttcggtggtttcgggaaggcgtggcggcggcgctcggc
gttcctacgggacacgtgcacatcaaccggctgaacgagaagaagaatggcatcgagctc
ttcgtgtcctctgataggccgggggtctcagagccccgccccgccgaggaggtcatccaa
tccctgaacgtccgggtcctccaccgccacctggggcacttcggcatcaccgaggtctcc
acagaggagaacgtcctgcagggcgagcacagagaccacgtgtggggcggagaaggtttc
tacacaggcctcctcttcgtcaccatcttcatcatcatcatcatcacctgcttgatggtg
ttgtaccgactcaaggagaaggtccaggtgtctgacagacagctgaaggctccgccccct
gacctccacctgaccccgacagtccacttggactcggcccagaggttaaagggcaccaag
gtttcaggaagcatggtccaagctgagcgccctccaactgtagccacgcccattcgccag
cagcagccaatcatagcttgccgccgcctcgcccctctcccagtggtccctctgcccagc
tccgcccccgttttcaacagccaggaccacgcccctctggccgtgacagccaatagcgag
ctgaagatctgcccctcccccttcaggatgaaacctgcagcccgactgcaagagagacgc
ggctccaacgtctctctggtgttggacatgtcggctctcggcgccgtggagccgctcaac
gtcgccgtggcgacgcccagagaggcggcggccagagagtacctgcaggcggccggccgg
cctctgacacggcggcagctccgcgacgtcgtcaacaacgcacacaagctgcacgccgag
ttcgctgaaattccaatgaattttattgatcccaaggagctcgatatcccaaaccacggg
accaagaaccgatacaagaccatactgcccaacctccattccagagtgatcctgaagacc
aagaccagcgaccctctgagctgctacatcaacgccaacttcatccggggttaccttggc
aacgagagggcgttcatcgccacccagggccccctggtgaacacggtgaacgacttctgg
accatggtgtggcaggaggagacgccggctgtggtgatgatcaccaagctgaaggagagg
aacgagaagtgcgtgctgtactggcccgagaggagagggatctacgggaaggtggaggtg
ttggtgaacggcgtcagagagacggagcactacaccacccgctgcctcacactcaagtgt
ggggaccagacccgtgagctgcagcacttctggttcacctcgtggcccgaccacaaaacc
cccgacgccacagcgccgctgctgcagctggtggaggacgtggaggaggagagacgggcg
agagacaccagcggacctgtggtggtccactgcagtgctgggattggccggaccggctgc
ttcatcgccaccaccatcggctgccggcagctgcagctggagggggcggtggacgtgctg
agcgtcacctgccggctgcgggccgacagaggcggtatgatccagacaggtgagcagtac
gagtttgtccaccacgccctgagcctgtacgaggcccgcctctctgcagaaaccggccag
tga
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