Pseudoliparis swirei (Mariana hadal snailfish): 130200449
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Entry
130200449 CDS
T09868
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130200449 (pus7l)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
130200449 (pus7l)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130200449 (pus7l)
Prokaryotic type
130200449 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Xp10_P7
Motif
Other DBs
NCBI-GeneID:
130200449
NCBI-ProteinID:
XP_056280728
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All DBs
Position
10:complement(12442705..12451119)
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AA seq
683 aa
AA seq
DB search
MKQDGDAVNIPVCFISNHEGFLGSIKNLIKDFVVTEIDVTGQRVNSAAATQTPNCASPDK
NDETSDECKWKSYSPVSQETDVSADCGLDVTIPSPGSFDLSVILGQSVSEELEQFVLTLK
EKPNKQELSLGSFADKHHRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELSHLVTED
EAEDFFRFIDAKVRGSSYTFGPDDDKDHRTTVHHFLSRRFGKLVETKSFTDQGTTAISVR
LREQGRPKKRTAEERKEEEVYTAFTLRKENLETLEAISYMAAALGVLPSDFTYAGIKDKR
AITYQSMVVKKVSTQRLKEKTAEFEKRGMRLFQIRSVGEPLRLGRLQGNHFDLVVRDLRP
HGASDAHSSGADTHTRLAALVHEALENVKARGFVNYYGPQRFGSVKTVQSDRVGLALLKE
DMVSAVRLFFTPEDGNDPQNHAKRHFLHTDNAKESLALMPLSKARERLMLRALNRYGSGP
DGCTQAWLSLPHSMRVFYPHAYCSRVWNEAVAHRLTTLGHKARRGDLVWRQDDTGESSSP
QIHVVTDREEDEGVYTLAHVLLPMPGNTAKYPENAMGTWFQERLARDGLDGCRFRVSGLK
LNLPGCYRPLLASPSNLSYQLQRAACGEGGGEAIGNSSRNSDRQLNGSTAEGKQDSLTLT
LNFDLDSSCYATICLREIMKCDP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacggtgatgctgtgaacatccctgtgtgcttcatatcaaaccatgaaggt
tttctcggaagcatcaaaaacttaatcaaagactttgtggtgactgagatagacgtcact
ggacagcgcgttaactcggcagcggccacacagacgccaaactgtgcctcccccgataaa
aacgatgaaaccagtgacgaatgcaagtggaaaagttattccccagtctcacaggagact
gatgtgtcagccgattgtgggctagatgtcaccatacctagtccaggcagttttgattta
agcgtgattttaggccagtcggtcagcgaagagctggagcagtttgtgttgactctcaaa
gaaaagccaaacaagcaggagctttctctcggatccttcgctgacaaacaccacagagct
aacgtccaccgggccgtcagacaccgcttccccttcctcatgacagtcaccattcagcct
gagatcagggtgagggaagacccagactacagagagctctcccatctggtcacggaggac
gaagcagaggacttcttcaggttcatagacgccaaagtgcgaggttcatcctatacgttc
gggccggatgacgataaggatcacaggaccacggtccaccactttctcagccgaaggttc
ggcaaactggtggagactaagagcttcaccgaccaggggacgacggcaatctcggtgagg
ctgagagagcaagggaggccgaagaaaagaacagcagaggaacgtaaagaagaggaagtt
tacactgctttcactctgcggaaggaaaacctggagactctagaggccatcagctacatg
gcagccgctctcggggtcctgccctcagacttcacctacgctgggatcaaggataagaga
gccatcacctaccagtccatggtggtcaagaaggtctcaactcaaaggttgaaagagaag
acggccgagttcgagaagagagggatgcgcctcttccagatccgctccgtcggcgagccc
ctcaggctagggcgactgcaggggaaccactttgacctggtggtccgcgacctgaggcca
cacggggccagtgacgcacactcctctggtgcagacacgcacactcgcctggcagcgctg
gtacatgaagcactggagaacgtcaaggccagaggttttgtcaactactacggaccgcag
aggtttgggagcgtgaagaccgttcagtctgaccgcgtgggcctggctctactcaaagag
gacatggtgagtgctgtgcgtctcttcttcactccagaagacggcaatgatcctcaaaac
cacgcaaagagacacttcctacataccgataacgccaaggagtctctggcgctgatgccg
ttgtcgaaagccagggagcggctgatgcttcgggccctgaaccgctacggctcaggtccg
gatggttgtacccaagcctggctcagcctgccccacagcatgagagtcttctacccccac
gcctactgcagcagagtgtggaacgaggcggtggcacacaggctgaccactctgggccac
aaggccaggcgaggagacctggtgtggaggcaggatgacactggagaatccagctcgcct
cagatccatgtggtgacggaccgagaggaagacgagggagtgtacaccctggcacacgtg
ttactgccgatgccgggaaacactgcgaagtatcccgaaaacgccatggggacctggttc
caggagagactggcccgagacggactggacggctgtcgcttcagagtcagcggcctcaaa
ctgaatctgcctggctgctaccgccccctgctggcctcgccaagcaatctcagctaccag
ctgcagagagcagcctgtggggagggaggaggagaggcgatagggaacagcagtaggaat
agtgacaggcagctgaatggcagtacagcagaagggaagcaggactcgctcactctcacc
ttgaacttcgacctggactcctcctgctatgctactatctgcctccgagagatcatgaag
tgtgacccctag
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