Pseudoliparis swirei (Mariana hadal snailfish): 130200466
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Entry
130200466 CDS
T09868
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130200466 (optn)
04137 Mitophagy - animal
130200466 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130200466 (optn)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130200466 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130200466 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
130200466 (optn)
Xenophagy
Cargo receptors
130200466 (optn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CCDC39
DUF4795
Musclin
SICA_beta
HP1454-like_middle_dom
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
130200466
NCBI-ProteinID:
XP_056280764
LinkDB
All DBs
Position
10:17482357..17487906
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AA seq
536 aa
AA seq
DB search
MASGGPVVNGDLSRSPGPSCPLEETLQQMHILIQENRELKEALRQTNTSMKERFEDLSAW
REKQLQERHFLESRLEEARGRVEELTLQNQELDSRREGRAGGPPAESLAAASNRSRAELD
ALRAQVARLQAEKNDLVGMNSELQLKADQDSHDDSFIEIIRVSDEGVDAVNGACSLERAR
RPDLSMTASRLESEEMTVSQLLQSLRNKTQRAERLQAELRSSAARMRELEERKAGVEKAT
QAPQAETKEDSGKGENAASEVESLKSQTTTLCKELQQAQSQLDQAEGMKKNLQDRWREVE
QDVVTLRAQLVEKQAVQTENDRLKLQVDSMQAQSLMEQRKSGEERNNLTQLKDAYTKLYE
DYNELLEEKKKRESVLVQKAAVGDLQDRLSAAEEALAAKQRHIDDMKQEMFSKEEELQTI
SVFQAQAEVYSSDFYAERAAREKLHEERERLAAQLEYVKKQNGQLQEELDSLGRHSLTEM
QKRHVSLGGNPHGGSLVGRGTSWQHQGNIPEHACPKCDEILPDLDSLQIHIMDCIN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggaggccccgtcgtcaacggtgacctctctcgctcgcccggcccgtcgtgc
ccgctggaggagaccctgcagcagatgcacatcctcatccaggagaaccgggaactgaaa
gaggccctgcgtcagaccaacacgtcgatgaaggagcgcttcgaggacctgtccgcgtgg
cgggagaagcagctgcaggagcgccacttcctggagagccggctggaggaggcgcggggc
cgcgtggaggagctgaccctccagaaccaggagctggactcgaggagggaggggcgggcg
ggggggccgccggctgaatcgctggcggcggcatccaatcggagcagagcagagctggac
gccctgcgggcccaggttgctcgcctgcaggcagagaagaacgacctggtgggcatgaac
tccgagctgcagctgaaggcggaccaggactcgcacgacgactccttcattgagatcatc
agggtctcggatgaaggcgtcgacgccgtgaacggtgcgtgtagtttggagcgcgcccgg
cgtccggacctgagcatgacggcgtcccgcctggagagcgaggagatgaccgtcagccag
ctgctccagtcgctgaggaacaagacgcagcgggccgagcggctgcaggccgagctccgg
tcctccgccgccaggatgagagagctggaggagaggaaggcgggcgtggagaaagcaacg
caggccccccaggccgagaccaaggaggattctgggaaaggggaaaatgcagcgtctgag
gtggagagtctgaagtctcagacgacgacgctgtgcaaggagctgcagcaggcccagagc
cagctggaccaggcggaaggcatgaagaagaacctgcaggacagatggcgcgaggtggag
caggatgtggtcactctgagggctcagctggtggagaagcaggccgttcagacggagaac
gaccggctgaagctgcaggtggacagcatgcaggcccagagcctgatggagcagaggaag
agcggcgaggagaggaacaacctgacccagctgaaggacgcctacaccaagctgtatgaa
gactacaacgagctcctggaggagaagaagaagagagagtctgtgctggtgcagaaggcg
gcggtgggcgatctgcaggaccggctgagcgccgccgaggaggccctggccgcgaagcag
aggcacatcgacgacatgaagcaggagatgttcagcaaggaggaggagctgcagacgata
tccgtgttccaggctcaggcggaggtctactcctcggacttctacgccgagcgagcggcg
agggagaaactccacgaagagcgggagcgcctggcggctcagctggagtacgtgaagaag
cagaacggccagctgcaggaggagctggactcgctgggcaggcattcgctgacggagatg
cagaagagacacgtgtcgctgggagggaatccacacggcggcagcctggtgggaagaggt
accagctggcagcatcagggcaatattcccgaacacgcctgtcccaagtgcgacgagatc
ctgccggacctggactccctccagatccacatcatggactgcatcaactga
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