Pseudoliparis swirei (Mariana hadal snailfish): 130200513
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Entry
130200513 CDS
T09868
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130200513 (parpbp)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130200513 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
130200513 (parpbp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130200513
NCBI-ProteinID:
XP_056280848
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Position
10:3900309..3915993
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AA seq
578 aa
AA seq
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MEDLGENLKLMVKIFRRECHRVLRSERTTIHGADGMLMLLQLAMAEVSKQHAGEFKVALS
DVLMAWKHLLLDKLHLPPPDFARSENYELILEAYESSLKRSNAVDLVDILSMYEQLRLVD
SDPGEPVSPIQMFEFLSGNTEVSELPDSSVPSTPSRASRPSQVKLAVRRVFCSYLSLLVN
AKNDMALALTLNVPDRALGRRAFTDAKHAAHDGSTSLFLAVTSFVRAVQLGGKGYAPPES
DPLRKHVKGLSDYVQFLDDLEEILGEVPDPSACGGRLVGAVRALLVKGRGGGDGVCVAAE
ETAKELKETIRQLQASGADGRSGTGISPARPRAHAVNHCTALGGRDTVKLLMALLDQEAL
AAPCRNKAELLSEDQPVLSGEEGTCVLGLFRSPEVSTGSSPEPLKSRVQTRLDLLKPKAK
VGGIRSQFACTYEDEDEPLSRVLEFPRQAPEHLNTPTGPEENTYAESSSTSSECPNKEQS
AVRRRGGAAALGPRSGNVRDGGASAGEQTVARAQQRKGNKRKQADSSDQHGGAENEPPQK
KPLARVSVKMPGKRAGGKAASKKKLIAGQGTLTGFFRV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttgggagaaaatctgaagctgatggttaaaatcttcaggcgagagtgccac
cgggttctgcgctctgagaggaccaccatccatggagctgatggcatgttgatgttgctg
cagctggccatggcagaagttagcaagcagcacgctggagagttcaaagtggctctgagt
gatgtcctgatggcctggaaacacttactgctagacaaacttcacctgccgccccccgac
tttgcacgctcggagaactatgagctcatcctggaggcgtacgagtcctccctgaaacgc
tccaacgccgtggacctggttgacatcctgtccatgtacgaacagctgaggctagtggac
tcggacccgggggagcccgtgagcccgatccagatgtttgagttcttatccggaaacacg
gaggtgtcggagttgcccgactcttcagtcccgtcaacaccgtctcgtgccagcagaccc
tcacaggtgaaactggcagtgagacgggttttctgctcctacctgagtctcctcgtgaac
gccaagaacgacatggcgctggcgctgaccctcaacgtgcccgaccgcgctctgggccga
cgggcgtttaccgacgccaagcacgcggcgcacgacggcagcacctctctgttcctggct
gtgacgtccttcgtgagggccgtgcagctcggagggaaaggctacgcgccgccggagtcc
gacccgctcaggaaacacgtcaaaggcctgtcggactacgtccagtttctagacgacctg
gaggaaatactgggagaggttcctgacccgagtgcgtgtggaggccggctggtgggcgcc
gtgcgggcgctgctggtcaagggacgcggcggtggagacggcgtgtgcgtcgcggccgag
gagacggcgaaggagctgaaggagacgatccgccagctccaggcgagcggcgccgatgga
agaagcgggacggggataagcccagcccggccccgggctcacgctgtcaatcactgcacg
gcgctgggaggccgggacacggtgaagctgctgatggcgctgttggaccaggaggcgctg
gcggcgccgtgccggaacaaggccgagctgctgtcggaggaccagcccgtcctcagtggg
gaggagggcacctgcgtgctcggcctgttcagatcccccgaagtgtctactggaagttct
ccagagcctctaaagagccgagtccagacccgactagacctgctcaagcccaaggccaaa
gtcggaggaattcgatcccagttcgcgtgtacgtacgaagacgaagacgagccactgagc
cgcgtgctggagttcccccgccaggcaccagaacacctgaacacccccaccgggccggag
gagaacacctacgccgagtcttcttcgacttcttctgaatgcccgaataaggagcagagc
gccgtgcggcggcgggggggggcggctgctctcgggccgcggagtggaaacgtccgagac
ggaggggcgagcgccggagagcaaaccgtcgctcgggcgcaacagcgaaagggcaacaag
aggaagcaggcggactcctccgaccaacacggaggggcggagaacgagccgccgcagaag
aaaccgctcgctcgcgtctcggtcaaaatgcccggcaagagggccggaggcaaagccgcg
agtaagaagaagctgatcgccggacagggaacgctaaccggcttcttcagagtctaa
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