Pseudoliparis swirei (Mariana hadal snailfish): 130200542
Help
Entry
130200542 CDS
T09868
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130200542 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130200542 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130200542 (tnpo3)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
130200542 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
130200542
NCBI-ProteinID:
XP_056280903
LinkDB
All DBs
Position
10:614390..635566
Genome browser
AA seq
923 aa
AA seq
DB search
MEGGKPNLTLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRESLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
ITVLTSCVEKAGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMALFQVLQRDETSTN
LHEAASDCVCSSLYAIENVETNMALGLQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHTIFRPYIQRLLHCLARHCQLEPDHDGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPSWEVTEAVLFIMSAIAKSVDPENNPTLSEVLQQVVLLPETVHMAVRFT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKCLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARALDSFVLSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLAEKS
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQLYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPITLLSSSIIVHIIQCA
IAAASLDHRDANCSVMKFVRDLVHTGVANDHEENFELRKQLIGQAMEQNGQQLITQLMHS
CCFCLPPYTLPDVAEVLWEVMVFDRPTFCRWLEHALKGLPKETSGGAVSVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggcaagccgaacctgaccctggtctaccaggcggtccaagccctgtaccac
gacccggacccggccgggaaggagcgagcctcggtgtggctcggggagctccagagatcg
atgtatgcgtgggagatctcagatcagcttctgcagctcaaacaggacgttgagtcgtgt
tattttgctgctcaaacaatgaagatgaagatccagacatctttctacgagcttccacct
gagacccacaatgcactgcgagaatcgctactgacccacatccagaacctcaaagacctg
tcgcccatcatcgtcacacagctggctttagccatcgcagatctggctcttcagatggcc
tcgtggaaaggatgcgttcacacgctgatagaaaagtacaacaatgacatcagctcgatg
cccttcctcatagagattctcactgtgctgccggaggaagttcacagtcgatctctacga
atcggagccaatcgtcggacagagatcatcgaggatctggcgtattactccagcaccgtg
atcaccgtgctgacgtcttgtgtggagaaggcgggtaacgatgagaagatgctcatcaag
gtctttcgttgtttggggagctggttcaacttgggagtccttgacagtaacttcatggcc
agtaaccagctgctcatggccctcttccaagtcctgcagagggatgagacctccaccaac
ctccacgaggcagcgtccgattgcgtctgctcgtctctctacgccatcgaaaacgtggag
accaacatggcactgggtctgcagctctttcagggcgtcctgacgctggagacggcgtat
cacatggctgtggctcgagaagaccttgacaaagtgctgaactactgcaggatctttacc
gaactctgcgagacatttttagagacgacagtcaggagtccaggccagggtatgggagac
ctgaggacactggagctgctgctgatctgtgcaggacacccgcaatatgaggtcgtggag
atctcctttaacttctggtaccgtcttggagaacatctgtataaaataaatgatgcagct
cttcacaccatcttcagaccatacatccagagacttctgcactgtttggcccgacactgt
caacttgagcccgaccacgacggaatcccagaggacacagatgattttggggagttcagg
atgagagtctctgacctcgttaaagacgtcatttttcttgttggatccatggagtgtttc
tctcagctatattctacattaaaagaaggaaacccttcctgggaggtgacggaagctgtt
ctcttcatcatgtccgcgatcgcaaaaagtgttgatccagagaacaacccaacgctgtcc
gaggtgctgcagcaggtggttcttcttccagaaaccgtccacatggccgtccgtttcacg
agcatcgagctggtcggggagatgagcgaggtcgtggaccggaacccaagattcctcgac
cccgtgttgaactatctgatgaagggcctcagggagaagtgtctggcatcggcagcagcc
aaggcgatccacaacatctgttcggtgtgcagagatcacatggctcagcacttccagggg
ctgctggacatcgctcgggccctcgactccttcgtcctgtcaaccgaggccgctgtagga
cttctgaaaggtacagctctggtcctggcccgtcttcctctggagaagatagcagaatgc
ctcagtgacctctgtgcggtgcaggtcatggctctgaagaagcttttggctgagaagtcc
acaaatggaaagtcggctgatccgaccgtctggctggaccggctggcggtcatcttcaga
cacaccaaccccatcgtggagaacgggcagactcacccctgtcagaaggtcatccaggag
atctggcccgtgctgtcggagactctcaacgctcaccaggctgacaaccggatcgtggag
cggtgctgccgctgcctccgcttcgcggtgcgctgcgtcggaaaaggctccgcctccttg
ctgcagccactggtcactcagatggtgagtgtgtatcagttgtatccacactcctgcttc
ctgtacctgggcagcattctggtggatgaatatggcatggaggagggctgcaggcaggga
ctgcttgatatgttacaggctctgtgtatgccgacgttccagctgctggagcagccgaac
ggcctgaggaaccaccccgacaccgtggacgacctgttcagactggccaccaggtttgtc
cagaggagtcccataactttactcagcagcagcatcatcgttcacatcatccagtgcgcc
atcgccgccgcctcattggaccaccgagacgccaactgcagcgttatgaagtttgtccgg
gacctcgttcacaccggagtcgccaacgaccatgaggagaactttgagctgaggaagcag
ctgattggtcaggccatggagcagaacggccagcagctcatcactcagctgatgcactcg
tgttgtttctgtctgccgccgtacacgttgccggacgtggccgaggtgctgtgggaggtc
atggtgttcgacaggcccacgttctgccgctggctagaacacgctctgaaaggcctgccg
aaggagacgtctggaggagccgtgagcgtcacccacaagcagctgacggacttccacaag
caggtcaccagtgctgaggagtgtaaacaggtgtgttgggccatcagagagttcaccaga
ctgttccggtag
DBGET
integrated database retrieval system
