Pseudoliparis swirei (Mariana hadal snailfish): 130200582
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Entry
130200582 CDS
T09868
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130200582 (scube1)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130200582 (scube1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
130200582
NCBI-ProteinID:
XP_056280951
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All DBs
Position
10:complement(8238356..8344839)
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AA seq
1020 aa
AA seq
DB search
MGSGCFSRDVCLFILLINTCRVMGNVGLADADECVEGSDDCHIDALCQNTPKSYNCICKL
GYKGDGKQCEDMDECENDYNGGCVHECINIPGNYRCTCFDGFMLAHDGHNCQDVDECVDN
NGGCQQVCVNTMGSYECQCTEGFFLSDNQHTCIHRTDDGMNCMNKDHGCAHICREAPGKG
GVSCECRPGFELAKNQKHCILTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDSKTCVE
KDEAAIESSEFNSTSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTL
QPDGKTCKDIDECQENNGGCDHFCRNTVGSFDCSCQKGHKLLTDERTCQDIDECSFERTC
DHTCINYPGSFECVCQKGYILYGLTHCGDIDECSISNGSCEHGCINTQGSYECVCPPAQK
LHWNKKDCTEAVRCLPNGKPAPRAQLTCTKSGGAEVCSLSCPSNALFLADSENSYTLSCG
VPVQPGKAPQKRNVTVALHTCGDTLAPPIKQKARFKIKDAKCHLRPRNKEKHRDSSRQSL
QGGQFPCTDNCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASDTCNVD
CVRERVKQKLQSAMRTLRKSINKQQFYIQFSGTEYEVAQKPSQVPEGAKACSTGQDLRDG
KCASCVLGTFYSGAQEQCVQCPPGTYQDTVGQLSCEPCPSTEGQGVAGARNVSQCGGQCS
EGHFSSDGFRPCQLCQLGSYQPEPGRILCFLCGGGLMTKYEGSVSFRDCEVKVHCAPGHY
YNSTTHRCIRCTGGTYQSDFGQNYCITCPGNTTTDFDGATNVSHCKNQMCGGELGEYMGY
IESPNYPGDYPSNVDCVWTINPPHKRRILIVVPEIFLPIEDECGDVLVMRKSALPTSITT
YETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLY
ASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKEMFPRSFIKLLRSKVTRFLRPYK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggttgtttttcccgggacgtttgtttgtttatcctcctcataaatacttgc
agggtgatggggaatgtcggactggcagacgcagacgagtgtgtagaaggttccgacgac
tgccacatcgacgccctgtgccagaacacgcccaagtcctacaactgcatctgcaagctg
ggctacaagggagatggcaagcagtgtgaagacatggacgagtgtgagaacgactacaac
ggcggctgtgtccatgaatgcatcaacatacccggcaactacaggtgcacctgcttcgac
gggttcatgctggcccacgacggacacaactgtcaggatgtggacgagtgcgtggacaac
aatggtgggtgccagcaggtgtgcgtcaacaccatggggagctacgagtgtcagtgcacg
gagggcttcttcctcagcgacaaccagcacacctgcattcaccgcactgatgacgggatg
aactgcatgaacaaggaccacggctgtgcccacatctgcagggaggcaccaggcaaaggc
ggggtgtcgtgcgagtgccgtcctgggtttgagctggccaagaaccagaaacactgcata
ttgacgtgtaactacgggaacggcggctgccagcacacgtgtgacgacacggacacgggt
cctgtgtgtggctgccatcagaagtacgccctgcactcggacagcaagacctgcgtcgag
aaagatgaggctgcaattgagagctctgagttcaattccacgtcagtagctgatgtggac
aagcgggtgaaacggcggctacttatggagacgtgcgccgtgaacaacggcggctgcgac
cggacttgtaaggacacggccaccggggtgcgctgcagctgccccgttggcttcaccctg
cagcccgacggcaagacctgcaaagacatcgacgaatgccaggagaacaacggcggctgc
gatcacttctgcaggaacacggtgggctccttcgattgcagctgccagaaaggccacaag
ctgctcaccgacgagcgcacatgccaagacatcgatgaatgctccttcgagaggacctgt
gaccacacctgcatcaactaccccggcagctttgagtgcgtgtgccagaagggctacatc
ctgtacggcctgacgcactgtggagacatcgatgagtgcagcatcagcaacggcagctgt
gagcacggctgcatcaacacgcagggcagctacgagtgtgtgtgtccgcctgcacagaag
ctccactggaacaagaaggactgcaccgaggcggtgaggtgtctgcccaatgggaagccg
gctccccgagcccagctgacatgcaccaagagcgggggggcggaggtctgctcgctctct
tgcccctccaacgccctcttccttgcagactcagagaacagctacacactgagctgcgga
gtgcccgtccagcctgggaaagctcctcagaagaggaacgtcaccgtggccttacacacc
tgtggcgacacgctggccccgcccatcaaacagaaggccaggttcaagatcaaagacgcc
aagtgtcacctgcggccgcgcaacaaggagaaacacagagattcctccaggcagagcctg
cagggaggccagttcccctgcaccgacaactgccaggtgaccttcgtcaacctgaagtgc
gactcgtctaagaagcgccggcgaggacgcaaatccccctcgaaggaagtgtcccacatc
acagccgagtttgagatggagatgaaggaggaggaggcctcagacacgtgcaacgtggac
tgcgtgcgggaacgggttaagcagaagctgcagagcgccatgcggacgctcaggaagtcc
atcaacaagcagcagttctacatccagttctccgggacggagtacgaggtggcccagaag
ccgtcccaggtgccggagggagccaaggcctgcagcaccggacaagacctccgagacggc
aagtgtgcgagctgtgtcttagggacattctacagcggggcccaggagcagtgtgtccag
tgcccccccgggacctaccaggacacggtgggccagctgtcctgtgagccgtgtcccagc
accgaaggacagggcgtcgccggtgccaggaacgtgtctcagtgtggaggtcagtgctca
gagggtcacttctcctccgatggcttccggccgtgccagctctgtcagctgggctcctac
cagccggaaccgggccgcatcctctgcttcctctgcggcggaggtctcatgaccaagtac
gaaggctctgtgtccttcagggactgcgaggtcaaagtgcactgcgctcctggtcattac
tacaactccaccacccaccgctgcatccgctgcacaggaggaacctaccagtcggacttt
ggccagaactactgcatcacctgcccggggaacaccaccacggacttcgacggagccacc
aacgtctcccactgcaaaaatcagatgtgtggaggcgagctgggagaatacatgggctat
atcgagtctcccaactaccccggagactacccctccaacgtggactgtgtctggaccatc
aacccgcctcacaagaggaggattctcatcgtggtgccagagatcttcctccccatcgag
gacgagtgtggagacgtgctcgtcatgaggaagagcgccctccccacctccatcaccacc
tatgagacgtgtcagacctacgagcggcccatcgccttcacctctcgctcccgcaagctc
tggatccagttcaaatctaacgagggcaacagcggcaaaggcttccaagtcccctacgtc
acctacgacgaggactaccagcagctgatagaggacatcgtgcgggacggcaggctctac
gcctcagagaaccaccaggagatcctgaaggacaagaagctgatcaaggccctgtttgac
gtgctggcccacccccagaactacttcaggtacacggctcaggagtccaaagagatgttc
ccgcgctccttcatcaagctgctgcgctccaaagtcaccaggttcctcaggccctacaaa
tag
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integrated database retrieval system
