Pseudoliparis swirei (Mariana hadal snailfish): 130200614
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Entry
130200614 CDS
T09868
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130200614 (usp6nl)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130200614 (usp6nl)
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Ortholog
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GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
130200614
NCBI-ProteinID:
XP_056281021
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All DBs
Position
10:2440922..2482539
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AA seq
875 aa
AA seq
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MTSPVPSPAPPGPLPAPHPWTPTMTSDQDAAVRLDQERADIVAKYDKGKEATVEPWEDTN
YHLYKVVDRFGFVHKNDLPSSDPVEEKHKHLEMDRTMKWLKMMKSWDKYKNSDKLLRRVY
KGIPLQLRGEVWCLLLDIPKVKEEKKDFYENLKARACGVSPDIRQIDLDVNRTYRDHIMF
MTRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGPKH
AMHGFFIPGFPKLMRFQEHHDRILRKTMPKLKHHLDGQEVLTSLYTMKWFFQCFLDRTPF
TLTLRIWDIYILEGERVLPTMSYTVLKLHKKHLMKLSMEELVEFLQVTLAKNFFLEDDFV
VDQLQASMTELRRMKLELPAPGKEEEFPKKPLGQLPPELAVGNHTANGQSHVEPAEPPRN
LSPEPERQRGSRPPSRSRRNSLEKSMRHHKAEKREMRSRGSGEIPDEQRKRSTTPPSAAT
PTPQITGDRGRHHGHAAANQNSNAASSSRREITPRWFKPSDTKLEAVKAAAREVSGGPSP
APSSPEDSAPPRRRPASKGSSPDANRGSNASQYDNVPELPEPEFEILELDKPLSRMRTPR
SETPVGVPSLHQGNSSLAGSAASIASGPRGAKHPLPPAFAHHSPGGVHASYPGSQSQYST
PPQQLSPGRTPTEVPVSHTAYPGLDLRGEERLYVPSSRFPPSSSVAYGERAYATAQRPNR
DSPEKALMNNSYASYRRPPPPSSNRNARPPPLHLETHGSSTPIYLQQLNSSAQLYGFEGR
QRGEAVPHNLPEGVGLPWASEAAPPLRSPDGVPCSPSFQQAQMSPVQEFSFPPNPDGGDD
ELHYRTQFQKQQLPQLFGGPHYRQEAFAMQESMLL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacctgtcccaagccccgccccacctgggcctctacctgccccccacccctgg
actcccaccatgacgtctgatcaggacgcggcggtgagactcgaccaggagcgagccgac
atcgtcgccaagtatgacaaggggaaggaggccaccgtggagccgtgggaggacaccaac
taccacctctacaaggtcgtggaccgcttcggcttcgttcataagaatgacctcccgtcc
tctgacccggtggaggagaagcataaacacttggagatggaccggacgatgaaatggctg
aagatgatgaagagttgggacaaatacaagaacagtgacaagctgctccggagggtctac
aagggaatccccctgcagctccggggggaggtctggtgtctgctgctcgacatccccaaa
gtgaaggaggagaagaaagacttctacgagaacctgaaggccagggcttgcggcgtctcc
ccggacatccgtcagatcgacctggacgtgaaccggacctacagagaccacatcatgttc
atgacccgctacgacgtcaagcagcaggctctcttccatgtcctcacagcctactccatg
tacaacacggaggtgggctactgccagggcatgagtcagatcacggctctgctgctcatc
tacatgaacgaggaggacgccttctgggctctggtcaagctgctgtcagggcccaagcac
gccatgcacgggtttttcatccccggcttcccgaagctgatgcgcttccaggagcaccac
gaccgcatcctcaggaagacgatgcccaagctgaagcaccacctggatggccaggaggtg
ttgaccagcctctacaccatgaagtggttcttccagtgcttcctggacagaactcccttc
accctcaccctcaggatctgggacatctacatcttggagggggagcgcgtgctgcccacc
atgtcctacaccgtcctcaagctgcacaagaagcacctgatgaagctgtccatggaggag
ctggtggagttcctgcaggtgactctggccaaaaacttcttcttagaggacgactttgtg
gtggatcagctgcaggcgtccatgactgagctcaggaggatgaagctggagctgcccgcc
ccaggtaaagaggaggagtttccaaagaagcctctggggcagcttccccccgagctggcg
gtggggaaccacacggccaacggtcaaagccacgtggagccggcggagcctccgaggaac
ctgagtcccgaaccggagcgccagcgggggagtcgcccgcccagccgatcgcgccggaac
tcgctggagaaatcgatgcggcaccacaaggccgagaagagggagatgcgctccagggga
tccggggagatccccgacgagcagaggaagcggtccacgacaccgccgtcggccgccacc
ccgacaccgcagatcacaggggacagagggaggcatcacggccacgccgccgccaaccag
aactccaacgcggcctccagctctcgcagggagatcaccccccggtggttcaaaccctcc
gacacgaagctggaggcggtcaaggcggcggcgcgggaggtgagcggagggccgtcgccg
gccccttccagcccagaagacagcgcgccgccccggcgccggccggcctccaagggctcc
tcgcccgacgccaaccgcggctccaacgcctcgcagtacgacaacgtacccgagctgccg
gagccggagttcgagatcctggagctcgacaaacctctctccagaatgaggacccctcgc
agcgagacgcccgtcggcgtgccgtccctccatcaggggaactccagcctggccgggagc
gccgcctccatcgcgtcagggcccaggggcgccaaacaccctcttcctcctgcgtttgcc
caccacagtccagggggggtccatgcaagctaccctggcagccagagccagtacagcacc
cccccacagcagctctccccgggaagaactcccaccgaagtccccgtctcacacacagca
tacccgggtctggacctcaggggggaggaaagactctacgttccgtcctctcggttcccc
ccatcctccagtgtggcgtacggggagcgagcgtacgccaccgcccagcgcccaaacaga
gactccccggagaaggcgctcatgaacaactcctacgccagctaccgccggccgccgccg
ccgagctccaaccggaacgccaggcctcccccgctgcatctggagacccacgggagctcc
acgccgatctacctgcagcagctcaactccagcgcgcagctgtacgggtttgaggggcgt
cagcggggcgaggcggtcccgcacaacctgccggaaggcgtcgggctcccgtgggcgtcg
gaggcggcgccgcccctccgatccccggacggggtgccgtgctcgcccagcttccagcag
gcccagatgtcgcccgtccaggagttctcgttcccgccgaaccccgacggcggcgacgac
gagctccactaccggactcagttccagaagcaacagctcccccagctgttcggaggacca
cactacaggcaggaggcgttcgccatgcaggagtccatgctgctgtga
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