Pseudoliparis swirei (Mariana hadal snailfish): 130200622
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Entry
130200622 CDS
T09868
Symbol
klhl42
Name
(RefSeq) kelch-like protein 42
KO
K27973
kelch-like protein 42
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130200622 (klhl42)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130200622 (klhl42)
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Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
Kelch_3
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_2
BTB
Kelch_5
Kelch_4
NANM
BTB_KLHL33
Phage_TAC_1
SO2946-like_C
Motif
Other DBs
NCBI-GeneID:
130200622
NCBI-ProteinID:
XP_056281033
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All DBs
Position
10:3606901..3611208
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AA seq
468 aa
AA seq
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MSSEQIIAIVMDDKIYEVNKKKLIEKSDYFRALYSSGMRETTEDSVRLRGLSVPGLELVL
EFINTSKVQVVNETLEDLIETASFLQVTSILKLLTSEIRLDNCVELCGLSEVYGTHDLRH
ACLKYMSCYYHPMLRRPEFSSLPSAVREQVREMRMKGTATLVAIGDFTCLSLDMPDQDEP
WSMLRYGEVEQRWKPLANNLPPDMINVRGYGSAVLDNYLFVVGGYRMTSQEISAVHCYNP
CRNEWNQVAPLNQKRSNFKLLAAQGKMYAVGGQSLGTVECYSPEKDWWTCVSSMPDPLAE
FSACECRGMIYVMGGYTARDRNTSVLRYCPASDTWAVFRTCSAHIRKQQMLSVEDTIYLV
GGYTHELQLGRRRPSQTEDVLTVQSYNVSTGQWVQLKENTSKSGLNLTCTLHNDGVYIMS
RDVSLPTSLEHRVFLKYNIFSDAWEAFRRFPALGQNMLLCSLYLPSVL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgagcagatcattgccattgtcatggatgacaagatctacgaggtgaataaa
aagaagctgatcgagaagagcgactacttccgcgcgctgtacagctccgggatgagggag
accacggaggactcggtgcggctgcgggggctcagcgtccccggcctggagctggtcctg
gagttcatcaacacctccaaggtccaggtggtcaacgagaccctggaggacctgatcgag
accgcctccttcctccaggtcacctccatcctcaagctgctcacctcggagatccgcctg
gacaactgcgtggagctgtgcggcctctcggaggtctacgggacgcacgacctgcgccac
gcgtgcctcaaatacatgagctgctactatcaccccatgctgaggcggccggagttcagc
agcctcccctccgcggtgcgagagcaagtccgggagatgcgcatgaaaggcaccgccacc
ctggtggccatcggggacttcacgtgcctctccctggacatgccggaccaggacgaaccc
tggtccatgctgaggtacggggaggtggagcagcgatggaaaccgctcgcgaacaacttg
cccccggatatgatcaacgtcagaggatacggatcagctgtgctcgacaactacctgttc
gtagtgggcggctaccggatgaccagccaggagatctctgcggtgcactgctacaacccg
tgcaggaacgagtggaaccaggtggcccccctcaaccagaagaggtccaacttcaagctg
ctggccgcgcagggcaagatgtacgcggtgggggggcagagcctgggcacggtggagtgc
tacagccccgagaaggactggtggacctgcgtgtcctccatgcccgacccgctggccgag
ttctccgcctgcgagtgccgggggatgatctacgtcatgggggggtacactgcaagagac
cggaacacgagcgtcctgcggtactgccccgcctccgacacctgggcggtgttccgcacc
tgctcggcgcacatccgcaagcagcagatgctgtcggtggaggacaccatctacctggtg
ggcggctacacccacgagctgcagctgggccggcggcgtcccagccagacggaggacgtg
ctgacggtgcagtcctacaacgtgtccacgggccagtgggtgcagctgaaggagaacacg
tccaagtcgggcctgaacctgacgtgcacgctgcacaacgacggcgtgtacatcatgagc
cgcgacgtcagcctgcccaccagcctggagcaccgcgtcttcctcaagtacaacatcttc
tccgacgcctgggaggccttccggcgcttcccggccctgggccagaacatgctgctgtgt
tctctctacctgcccagcgtgctgtga
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