Pseudoliparis swirei (Mariana hadal snailfish): 130200665
Help
Entry
130200665 CDS
T09868
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130200665 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130200665 (mybpc1)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130200665 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_MYOM1
THB
FN3_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
130200665
NCBI-ProteinID:
XP_056281096
LinkDB
All DBs
Position
10:complement(4438403..4470203)
Genome browser
AA seq
1279 aa
AA seq
DB search
MQEPTKKDETPNGQPAESVAPDSNGALPLPEITLEISPPPEAVAEGKEPVETDGKKPEAT
EPEPLQAVVAQESSPTENGSNQPQPGGVGVKEQAGSGNSTVKDEGPCSPPQTDDDDAAAT
TPSPTTQAEDANSPKKLLIELPNDSVPAMGRKDSVWSLGEGQGLEELDKPIESPPQSTLM
IESPQSAVISVGGDITFVAKVEAKDLLRKPTVKWFKGKWMDLASKTGKHLQLKETFDRLT
KMHTFEMHMIKAKDNYAGNYRCEVTYKDKFDSCSFNLEVKEAEQSSQNIDIRSAFKRSEG
QEDAGELDFSGLLKHREPKQQDDTPEVDVWEILKKARPDQYEKIAFMYGITDLRGLLKRM
KKIPREEKKSEAFAKKLESAYQADKGGRIRMVVDLADPTVELKWYKNGQEIRPSPKYIFE
HKGTQRIMVINNCSLNDDAAYSVAAGDEKCCTELFVKELPVKIVKDIEAVKTTVNERIEL
ECEVSEEGAQVKWMKNGVEVPTGVRSRYRVKCEGLKHFLVINDASREDTGSYSIMATGGT
SEAHVQVDLKPLKVFQDLQDQKVLLGQPIKLQCEISPGNVPGRWYRNGQLIQPNDRINIV
HRNRVHRLEIAAGTLHDAGDYTFVPDGYSRSLSAKLNIIDPPRVHLESLNFPENTVTIVA
GNKLRLEIPISGEPAPRVVWMKGERVILESGHRVHTETSADQTSLMIDVTERDDTGNYKI
VLQNEAGEATASIKIKVVDIPDPPEAPLVPVVGGDWCSMTWEPPKYEGGSPILGYFIERK
KKQSSRWMRLNFDLTKETAFEPKKMIEGVSYEVRIFAVNAIGVSKPSEPSIPFTPLAVTS
EPTMLVVDDVTDITVTVKWRPPETIGAAGLDGYLVEYCVEGTDIWVASNKELTDKTKYTI
TGLTPGVRMLVRVKAINAAGASTPRTIQHHVLVKEVIEPPKIRVPRHLKQTYTRRVGEAV
NLVVPFLGKPRPKVTWVKEGNAIDPTHVSIRNTDCDSIIFIRKAERSHSGKYEMAVQVEN
HVDTAIIDIQVVDLPGPPQCVTIEDVWGGNVALVWTPPKDNGNAPITGYTIQKADRKTME
WYTCIEHYHRSCITITELVVGNEYFFRIFAENMCGPSDTATQTKKSALIVKESMQLKTHD
YSDHDFMEAPKFTQPLINTSAIAGYNATLNCSVRANPRAKVIWMKNKMAILDDPRYRMFS
NQGVCTLEIRKPSPYDGGTYTCKAVNDLGEAQVDCKLEVKGGFTFYELMQRGVPLHLIDK
YINEKIVDQEEVKKMETLQ
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcccacaaagaaagatgagacgccaaatggccagccagcagaaagtgttgcc
ccagacagtaacggtgccctgcccctacctgagataaccctggagatttctccaccccca
gaagcggtagcagaggggaaagagccagtagagactgatgggaagaagccagaggccaca
gagcctgagccgttacaggctgtggtggctcaggagtcgagccccacagagaatggctcg
aaccaaccacagcctggtggggttggggtaaaagagcaagcagggtccggtaactctact
gtaaaagacgagggcccttgctcccccccacaaactgatgatgatgatgctgcagcaact
accccatccccaacaacccaagcagaggatgccaattcaccaaagaaactcttaatcgag
ttgcctaatgatagcgtgccagccatggggagaaaagactcagtgtggtctctgggagag
ggccagggactagaagaactggacaagcccattgagagcccaccacagtccaccctgatg
atagagagtccccagagtgctgtgatctctgtgggtggagacatcacctttgtcgccaag
gtggaggccaaagatctcctccgcaaacccacagtcaagtggtttaaaggaaaatggatg
gatctggccagcaagacaggaaagcacttacagctgaaagaaaccttcgaccgattgacc
aagatgcacacatttgagatgcacatgatcaaggccaaagacaactatgccggaaactac
aggtgtgaagtcacctacaaggacaagtttgacagctgctcctttaacttggaggttaaa
gaagctgaacagagctcacagaatattgatattcgatcagctttcaaaagaagtgaagga
caagaggacgcaggggagcttgactttagtggtctcctaaaacatagggagcccaaacag
caggacgacacccccgaggtggacgtgtgggagatcctgaagaaagcccggccggatcag
tacgagaagatcgccttcatgtacggcatcacggacctgaggggtctgctgaagaggatg
aagaagatccccagagaggagaagaagagcgaagcttttgcaaagaaactggagtcggcc
tatcaggcggataaaggggggcggatccgcatggtggtggatctggccgaccccacggtg
gagctgaagtggtacaagaacgggcaggagatcaggccatcgcccaagtatatttttgag
cataagggcacacagaggattatggttatcaacaactgctccttgaatgatgacgcggcg
tattctgtagctgcaggagacgagaaatgctgcacagagctgtttgtcaaagagctgccg
gtgaagatagtgaaagacatcgaggctgtgaagaccacggtgaacgagaggatcgagctg
gagtgcgaggtgtcagaggaaggcgctcaagtcaaatggatgaagaacggcgtcgaggtg
ccgacgggagtgcgctccagataccgagtgaagtgcgaaggattaaaacacttcctggtg
atcaatgacgcctccagggaggacaccgggtcgtactccatcatggctaccggcggcacg
tctgaggctcacgtgcaggtcgacctgaagcccctgaaagtgttccaggacctgcaggat
cagaaggtgctgctgggtcagcccatcaagctgcagtgtgagatctcccccggcaacgtc
cccggccgctggtaccggaacggacagctgatccagcccaacgaccgcatcaacatcgtg
cacaggaacagggttcatcgtctggaaattgcggccggcaccctccacgatgcaggagac
tacacgtttgtcccggacggatattcacggagcctctcggccaagctcaacatcattgat
ccgccgagggtgcacttggaaagcttgaacttcccagagaacacggtgacaatcgtggcg
ggaaataaacttcgcttggagatccccatcagcggagaaccagcacccagggtggtgtgg
atgaagggtgaaagggtgattctcgagtcgggccatcgcgtccacactgaaacgagcgcc
gaccagacgagcctgatgatcgacgtcacggagcgggacgacacaggcaactacaagatt
gtcctgcagaacgaggcgggtgaagccacggccagcatcaaaatcaaggtggtggacatc
cctgaccctccagaggctcctttggtccccgtggtgggcggggattggtgctccatgacg
tgggaaccgccaaaatatgaagggggctcaccgatactaggatacttcatcgagaggaag
aagaaacagagctccagatggatgaggctcaacttcgacctcaccaaagaaacagccttc
gaacccaagaagatgatcgaaggcgtgtcgtacgaggtgcgcatctttgcggtcaacgcc
atcggtgtgtccaagcccagcgaaccatccatacccttcactcccctcgctgtgaccagt
gagcccaccatgctggtggtggacgacgtcaccgacatcacggtgaccgtgaagtggcgt
cctcccgaaaccatcggggccgccggtctggacgggtacttagtggagtactgcgtagaa
ggaactgacatttgggtcgcttccaacaaagagctgacagataagaccaagtacaccatc
accgggttgactccgggggttcggatgctagttcgagtcaaagccatcaacgctgccgga
gccagcactccacgcaccatccagcaccacgtcctggtcaaagaggtcatcgaaccacca
aagatccgcgtcccccgacacttgaagcagacgtacacccgtagagttggagaagcggtc
aacctcgtcgtgccatttctgggcaaaccaaggccaaaggtcacctgggtgaaagagggc
aacgccatcgacccgacccacgtcagcatccgcaacacagactgcgacagcatcatcttc
atccgcaaggccgaacgcagccactccggaaagtacgagatggcggtgcaggtggagaac
cacgtggacacggccatcattgacatccaggtcgtagacctgcccgggcctcctcagtgt
gtgaccattgaagatgtttggggagggaacgtggctctggtgtggactcctcccaaagac
aacggcaacgccccgataacaggctacaccatccagaaggccgacaggaagacgatggag
tggtacacgtgcatcgagcactaccaccgcagctgcatcaccatcacggagctggtggtg
gggaacgagtacttcttcaggatcttcgccgagaacatgtgcggcccgagcgacaccgcc
acccaaaccaagaaaagcgcgctcatcgtcaaagaaagcatgcagctgaaaacgcacgat
tacagcgaccacgacttcatggaggcgccgaagttcacgcagccgctgatcaacacgtcc
gccatcgccggctacaacgccactctcaactgcagcgtccgggccaacccgagggccaaa
gtgatctggatgaagaataagatggctatcctcgacgacccgcgctaccgcatgtttagc
aaccagggagtatgtactctagagatcaggaagcccagcccctacgacggcggtacgtac
acctgcaaggccgtcaacgacctgggagaggcccaagtggactgcaagctggaggtcaaa
ggaggcttcaccttctacgaactcatgcaacgcggagtgcccctgcacctgatcgacaag
tacatcaacgagaagattgtcgatcaagaagaagtaaagaaaatggaaacattgcaatga
DBGET
integrated database retrieval system
