Pseudoliparis swirei (Mariana hadal snailfish): 130200669
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Entry
130200669 CDS
T09868
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130200669 (prdm4)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130200669 (prdm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
NOA36
FAM176
zf-C2H2_jaz
DUF7479
zf-C2H2_16
C2CH-3rd_BIRD-IDD
CCD97-like_C
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
130200669
NCBI-ProteinID:
XP_056281101
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All DBs
Position
10:11016287..11022219
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AA seq
886 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPIPTSGMSVAIPSLGPSLGSLPSALSL
MLPMGPLSDRGVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSS
LNMDGTLLVSSNNPSGLDHYSGPGGPLEQGLVPMDSRQVSGQGDLHQTGAHELDSTGLAM
VSRVSSPMSPDRMGEELATMDRVGSDTQQQLGGGRRPQSHEGLTGVDSSAGVMPLHGPPV
LELPVVMEQDHMGGRVGNTVGGRAGGLGEQLHSNRELNSGVVSVVLTGSMASQGQLEPVL
LHSHSGMGLEAVHVSPISAEVSLGPENNLVLVNSTLQLEDSTSNKENMATAYTIWCTLCE
RSYTSDCPEHGPVTFIPDTPIQSRARLSLPRQLCLRISVADEPLGVFARDVIPPRTCFGP
IVGQHCSNVDLSDWPEKDTPQIWKMYHNNVLEFYIVTTDENECNWMMFVCKARTCEEPNL
VAYPANGKLFFCTTTEIHPDQQLLFYYSRDYCRLMGVPQVPDGQICRCGKECSSFSELKS
HFDSHNSSHSHNQPPHSHSPSQQDHSQQQQQQQQQQQQEQQPQQQQHTHREEKLTNGTLS
SSSSPWPCHTHAAGQTNSDNNSGRAGSHRNSNNVTSRAKGQGHAREKKFKCSMCSRAFLT
STKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYRCTVCEKLFTQKSHV
ASHMLIHTGAEKLKCDLCDRAFIRKHDLKQHMFSHTHERRIQCPKCNKHFLKTNHLKKHM
NSHEGRRDFVCEKCHKAFLTKYHLTRHLKICKGPKMERASRKEQELEEEEEEEEEEEEEE
EEEEEEEDDDDSQGREVERLVDSASNEDCGLDVGGYNSEKSPSPPH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctgagtcctgtgggcatggatcagctcagtgtgccctcggtgagt
gccagccacctgggtctgcccacctctccgacacacaaccccatccccacttcaggcatg
tcggtggccatccccagcctgggtccctccctgggctcccttccctctgccctctcgttg
atgctccccatgggtccgctgagtgacagaggagtgatgtgcggcctgccagagaggaac
tactctttgccgccgcctccatacccacaccttgagagcagctacttccgacacatattg
ccaggtatcctctcctatctggcagaccgtccaccacctcaatatatccatcccagcagc
cttaacatggatgggacccttttggtgtccagcaacaatccctcaggtcttgatcactac
agtggccccggaggcccactggagcagggcctggtgcccatggactccagacaggtgagt
ggccagggagacctccaccagactggtgctcatgagctggactctacaggattggccatg
gtgtcacgtgtcagtagtcccatgtccccggaccggatgggtgaggaactggccaccatg
gatagagtggggtctgacacccaacagcagctcggtggggggaggaggcctcagtcgcat
gaaggattaactggggtggactcatctgccggggtgatgcccctccatggaccccctgtt
cttgaactaccggtggtgatggagcaggatcatatggggggccgagtggggaacactgtg
gggggaagagcaggtggactcggggaacagctccactcaaatcgggagttgaactcaggc
gttgtcagtgtggtgctcactggctccatggccagccagggacaactggagccagtgttg
ctccatagccactctgggatgggactggaggcagtgcatgtgtcccccatctctgcagag
gtgtcgctggggccagaaaacaacctggtgctggtcaactccaccctgcagctcgaggat
tctacctccaacaaggagaacatggccactgcttacaccatctggtgcactctgtgtgag
cgctcgtatacctcagactgcccagagcatggcccagtcaccttcatccctgacacgcct
attcaaagccgggctcgcctctctctgccgcgtcaactgtgcctgcgcatctcggtagcg
gacgaaccgcttggagtttttgctcgggatgtcattcctccaaggacatgctttgggccg
attgtgggccagcactgtagcaacgtggacctctctgattggccagaaaaggacacgcca
caaatatggaagatgtaccacaacaatgtgctggaattctacattgtgacaactgatgag
aatgagtgcaattggatgatgtttgtctgcaaagcaagaacctgtgaggaaccgaacctg
gtggcgtaccctgccaacggtaaattgttcttctgtacaaccacagagatccacccggac
cagcagctgctcttctattacagcagagactactgcaggctgatgggtgttccgcaggtc
cccgacggccagatctgccgttgtggcaaagagtgctcttctttctctgagctcaagtct
cattttgatagccataacagtagccacagccataaccaacctccacacagccacagccca
tcgcagcaggaccactctcagcaacagcagcagcagcagcaacagcagcaacaagagcaa
caaccacagcaacagcaacacactcaccgggaagagaagctgactaatgggaccttgagc
tcctcttcttccccatggccctgccacacccacgctgcaggacaaacaaacagtgataac
aacagcggcagggccggcagccatagaaactctaataatgttacctccagagcaaaaggt
cagggtcatgcccgggagaagaaattcaaatgcagcatgtgttcccgggcttttctcaca
tccacaaagctcaacgtgcacttcatggggcacgtggggatgaaaccgcacaagtgtgaa
tactgcagtaaggccttcagcgatcccagcaacctcaggatgcacctcaagattcacaca
ggtcagaagaactacagatgcacagtttgcgagaagttgtttacccagaaatcccatgtg
gcgtcgcatatgctcatccatactggcgcagagaagctcaagtgtgacctgtgtgaccga
gcgttcatcaggaaacatgacctgaaacaacacatgttctctcacacacatgagcgccgc
atacagtgccctaagtgtaacaaacacttcctcaagaccaaccacctgaagaagcacatg
aactctcacgagggccgaagagactttgtctgtgagaaatgccacaaagctttcctcacc
aaataccacctcacccgccacctcaagatatgcaaagggcccaagatggaaagagcatca
cgtaaggagcaggaattggaagaggaggaggaggaggaggaagaggaggaggaggaggaa
gaagaagaagaggaagaggaggacgatgatgatagtcagggaagagaagtagagagactt
gtagactcggcaagcaacgaagactgtggtttagatgttggaggatataactctgaaaag
tccccgtccccccctcattga
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