Pseudoliparis swirei (Mariana hadal snailfish): 130200684
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Entry
130200684 CDS
T09868
Symbol
nav3
Name
(RefSeq) neuron navigator 3 isoform X1
KO
K23919
neuron navigator 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130200684 (nav3)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
130200684 (nav3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_NAV1
Ubiquitin_6
AAA
nSTAND3
NPHP3_N
AAA_14
AAA_25
AAA_16
AAA_22
ATG16
RNA_helicase
AAA_2
AAA_5
ResIII
PhoH
AAA_28
AAA_7
AAA_18
KTI12
CCDC39
Motif
Other DBs
NCBI-GeneID:
130200684
NCBI-ProteinID:
XP_056281124
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All DBs
Position
10:complement(18133981..18202274)
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AA seq
2012 aa
AA seq
DB search
MSHNVDACLSFLDARGVNVQGLSAEEIRTGNLKSILGLFFILSRYKQQQQQQQQYYQSLV
ELSQQAAGLKTQDMQSSLTARCASPAAPGGPGGPGSPQKKNTRLPGPSRASAAGSGAPRS
PGSSNLSRRSQSFSSIDRTQPPQYHEREAVRGPPVPDGLSGGGASGPAPASAIPSPATGK
SWRSKSMNLKHSATASAPPGSEGGSAGAAGPQRSMLEKFRLINPRSASRAEMSLREEDDM
SEYGEEDGGAETAETGRTSSSSNSSSSLPKGSAGAGRSKDKEDKSRSGRPSKEAPLAAAA
RKTSKMASLIPKGGKPAPGKKDGAAPSAFSGIPKVGLKAPPTPTSTPTSRPRSQSHAPLA
KGGPGGSFYSQRPAGGPEGRRTSMTSSNSTSALSGSAGMMGAGGGGGAGGGGAGGAGGAG
AGGGGGGGRGAGGAGGGGGALGGNGVVQLPQQQHHSHPNTATVAPFMYRTYSENDCSLVT
PGDPCLSPTKGELVYSKTAKQCLEEISGEDPETRRMRTVKNIADLRQNLEETMSSLRGTQ
ISHSTLETTFDTTVTTEVNGRSLPALATRSSPMAWRLGQSQTPRLQAGDAPSLPSSYAAP
RASTASAGTTTGRYSGHSDPSRYLTDGGLHLYERTAGRASDAPTAATASREASQRGSREV
QGDVDSWDDSSSVSSGLSDTLDNISTDDLNTPAAAGSPRKSKGAQSQKGSRSKHAEPEVS
SSWAGAEDLKKVEEELEASMEPGSSRWKASSSSSSSAQAQSQYEEAGQKAAALAQMSQTG
SWRRGMTAQVGITPPRTKGTSPAHKTPGKTDDAKASEKGKAPSKGPAAIQRSPSDAGKSS
GDEGKKPPSGIGRPATTASFGYKKIPGAGGTLITSSGATLASGSAPLGKAPKSSSAALGK
APKSSSAALGKAPKSSSAALGKGAGGVRKTSLDGSQPEDDGVLLGCSGSKLTLQYRSLPR
PAKSSNVSGKAAAAQAGAKRKDGKAGSDRCSPATANQTDKEKVAVSDQDAATAGLSTSAK
SSPTSSSTGQSGLRQPGSKYPDIASPTFRSMPLDRNTLPKKGLRYPPSSRQASQEEGNEW
LRSHSTGGLQDTGSQSPLSPPPCSNTGKHHYSSLVSPTSTGQYSLPPGGTGMSRSNSIPA
QDSFDLYGEGHPLGGSATSLEDRPRAISRSGSFRDSTDEVHGSSLSLVSSTSSLYSATEE
KAHSEGQTIQNSTQIRKLRRELDASQEKVATLTSQLSANAHLVAAFEKSLSHMTCRLQSL
TMTAEQKETELVELRETIEGLKTQNTDAQTAIQVALNGPDHLHKELRIRRQHSSESMSSI
NSAASHSSMGSLGKDAEDKKKKKKSWVADSIPAQLRSSLKHAFSKKKNKSQSAPDESEEM
SDSRPPSPRLQRQAGGAALHGSASTAELCECTEAEAETILLLKNELREKELKLTDIRLEA
LSSAHHLDQIREAMNRMQNEIEALKAENDRLKSSGNATPTATPTATPPKSARPPSETSST
SSSSSRQSLGRSLNNLNITDSIMADILLDDGYEGNLRKEGRTVRIVVAIGNGPYGTKGTQ
GQAYLIGSIGVSGKTKWDVLDGVIRRLLKEYLFRVDPLTSLGLSSDSIVSYRIGEVLRSH
ASQVPELLPCGYLVGDNNVIKVNLKGVKENSIDSLVFDTLIPKPIIQRYLNLLMEHRRII
LSGPSGTGKSFMAAKLAEYILSQMGQPVTEHNVASFNVDHNSSKDLRQYLSSLAEQCGSE
DADSEPPTVVILDNLHHVGSLGDIFNGFLNCKYHRCPYVIGTMNQGVSSSPNLELHHNFR
WVLCTNHTEPVKGFLGRFLRRKLIETEIHKNMRSNDLIKVIDWIPKTWQHLNGFLEAHSS
SDVTIGPRLLLSCPMDVEGSRVWFTDLWNYSLVPYLLEAVREGLQLYGKRVAWEDPSKWV
KDTFPWSAAALQPDGQALLQLRPEDVGYDGYSASKEGAASKQVSQSDTEGDPLMNMLLRL
QEAANYSSTQSCDSDSTSHHDDQLDSSLESAL
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaacgtggacgcctgcctcagcttcctggacgccagaggagtgaatgtgcag
gggctgtcggcagaagagatccggaccggcaacctgaagagcatcctgggcctcttcttc
atcctgtcgcgctacaagcagcagcagcagcagcagcagcagtactaccagtccctggtg
gagctcagccagcaggccgccggcctcaagacgcaggacatgcagtccagcctcacagcg
cggtgtgccagtcctgcggcccccgggggccccggaggccccgggtccccacagaagaag
aacacgaggctgccgggcccctccagagcctctgctgcgggcagcggggcccccaggagc
cccggctcctccaacctcagccgccgcagccagagcttcagcagcatcgaccggacccag
ccgccgcagtaccacgagcgagaagcggtgcgcggccccccggtaccggacgggctgagc
gggggcggagccagtgggccggcgccggcctccgccatcccctcgcccgccaccggcaag
tcgtggcgcagcaagtccatgaacctgaagcacagcgccacggcgtcggcgccgccgggc
tccgaaggcgggtcggccggcgccgccgggccccagaggtccatgctggagaagttccgc
ctgatcaacccgaggtcggcgtcgcgggccgagatgtctctgcgggaggaggacgacatg
tcggagtacggcgaggaggacggcggcgccgagaccgccgagaccggcagaacctcctct
tcctccaactcctcctcttcgctgccaaaggggtcggccggcgccggaaggtccaaagac
aaggaggacaagagccggtccggtcgaccctccaaagaggcgccgctcgccgccgccgcc
aggaagacctccaagatggcgagcctcatccccaaggggggcaagccggcgcccgggaag
aaggacggcgccgccccctcggccttcagcggcatccccaaggtgggcctcaaagctccg
cccacgccgacctccacgccgacctccaggccgcgcagccagagccacgcccccctcgcc
aagggggggccgggcgggagcttctacagccaacggcccgccgggggcccggagggccgg
aggaccagcatgacctcctccaacagcacctccgccctgtcggggtccgctgggatgatg
ggagcaggaggaggaggaggagcaggaggaggaggagcaggaggagcaggaggagcagga
gcaggaggaggaggaggaggaggaagaggagcaggaggagcaggaggaggaggaggagct
ctgggagggaacggagtggttcagctcccccagcagcagcaccacagccaccccaacacg
gccaccgtggcccccttcatgtacaggacctactcagagaatgactgctccctggtgacc
cctggtgacccctgcctcagccccaccaagggggagctggtctacagcaagaccgccaag
cagtgcctggaggagatctcaggtgaggaccctgagacccgacgcatgaggacggtgaag
aacatcgccgacctgcggcagaatctggaagaaaccatgtcaagtctccgggggacacag
atcagccacagtactctagaaaccaccttcgacaccacggtgaccaccgaggtaaatggg
cggagcctaccagccctcgccacacgctcctcccccatggcctggcgcctgggccaatcg
caaaccccgcgcctccaggcgggcgacgccccctcgctgcccagcagctacgccgcgccc
agggcgagcaccgcgagcgccggcaccaccaccgggcgctacagcgggcactcggacccc
tccaggtacctcaccgacggcggcctccacctgtacgagcggaccgccggccgagcctcc
gacgcccccaccgccgccaccgcctcccgagaagcgtcccagagaggcagcagagaggtg
cagggcgacgtcgacagctgggacgacagcagctcggtgagcagcggcctgagcgacacg
ctggacaacatcagcaccgacgacctcaacacgcccgccgccgccggctcgccgcgcaag
agcaagggagcgcagtcccagaagggaagcaggtccaagcatgcagagcccgaggtgagc
agcagctgggccggagccgaggacctgaagaaggtggaggaggagctggaggcgagcatg
gagcccggctcctcccgctggaaggcctcctcgtcctcctcctcttccgctcaagcccag
agtcagtacgaggaggcggggcagaaggccgccgcactggcccagatgtcccagacgggc
tcgtggaggcggggcatgacggcccaggtcggcatcacgccacccaggaccaagggaacc
tccccggcccacaagaccccaggcaaaaccgatgacgccaaagcctcggagaagggcaag
gccccttccaagggtccggccgccatccagcgctcgccctccgatgccgggaagagtagc
ggagacgaaggtaagaagcctccctccggcatcgggcgcccagccaccacggcgtctttt
ggatacaagaagatcccgggggccggcggtaccctcatcacctccagcggggccacgctg
gccagcggctccgcccccctgggcaaggcacccaaatcctcctccgccgccctgggcaag
gcgcccaaatcctcctccgccgccctgggcaaggcgcccaaatcctcctccgccgccctg
ggcaaaggcgcgggcggcgtgcgcaagaccagcttggacggctcgcagcccgaggacgac
ggcgtcctgctcggctgcagcggctccaaactgaccctgcagtaccggtctctgcccaga
ccggccaaatcctccaacgtgagcggcaaggcggcggcggcgcaagcgggcgccaagcgc
aaggacgggaaagcgggctccgaccgctgcagccccgccaccgccaaccagacggacaag
gagaaggtggcggtgtcggaccaggacgccgccacggcgggactgtccacctcggccaag
tccagccccacctccagttcaacgggccaatcgggactcaggcagcccggatccaagtac
ccggacatcgcctcccctacgttccgcagcatgcctcttgacagaaacacgcttcccaaa
aagggactgaggtaccctccgtcctcccgccaggcgtcccaggaggaggggaatgagtgg
ctgcggtcccattccaccggcgggctgcaggacaccggcagccagtcgccactgtcgcct
ccgccctgcagcaacacggggaaacaccactactccagcctggtgagccccaccagcacc
ggccagtacagcctgccgccgggcggcaccggcatgagccgctccaacagcatcccggcc
caggactccttcgacctgtacggggagggccatccactagggggcagcgccacctccctg
gaggaccggccgagggccatcagccgctccggctccttcagggacagcaccgacgaagtc
cacggctcttctctgtctctggtgtccagcacgtcttcgttgtactcagcgacggaggag
aaagctcattcagagggccaaaccatccagaactccacgcaaatcagaaagctccgccgg
gagctggacgcgtcgcaggagaaggtggcgaccctgacgtcccagctgtctgccaacgct
cacctggtggcggccttcgagaagagcctgagtcacatgacctgccgcctgcagagcctc
accatgacggccgaacaaaaggaaacggagttggttgagttgagggaaaccatcgagggg
ctgaagacccagaacaccgacgcgcagaccgccatccaggtggcgctcaacggcccggac
cacctgcacaaagagctgcggatccgccggcagcactcgtcagagagcatgtccagcatc
aacagcgcggccagccactccagcatgggcagcctgggcaaggacgccgaggacaagaag
aagaagaagaagagctgggtggccgactccatcccggctcagctgcgcagctccctgaaa
cacgccttcagcaagaagaagaataaatcccagtcggcgccggacgagtcagaggagatg
agcgactcgcggccgccgtcgccccgtctgcagcggcaggccggcggcgccgcgctgcac
ggctcggcctccaccgccgagctctgtgaatgcaccgaggccgaggccgagaccatcctc
ctgctcaagaacgagctgagggagaaggagctcaagctgacggacatccgcctggaggcg
ctaagctccgcccaccacctggaccagatccgagaggccatgaaccgcatgcagaacgag
atcgaggcgctgaaggcggagaacgaccgcctgaagtccagcggcaacgccacgcccaca
gccacgcccacagccacgccccccaagagcgcccggccgccctccgagacctccagcacg
tcctcgtcctcctcccgccagtccttggggcggtcgctcaacaacctgaacatcacggac
agcatcatggcagatattctgctggacgacggctacgagggcaacctgcgcaaagagggc
cgcactgtgcggatcgtggtcgccatcggcaacgggccgtacggcaccaagggtactcag
ggccaggcgtacctgatcgggtccatcggcgtgagcggtaaaaccaagtgggacgtcctg
gacggggtcatccgccgcctgctcaaggagtacctgttccgggtggaccctctgaccagc
ctggggctcagctccgacagcatcgtctcctacaggataggagaggtactgcgctcccac
gcctcccaagtgcctgagctgctgccctgcggctacctggtgggagacaacaacgtcatc
aaggtcaacctcaagggtgtgaaggagaacagcatcgacagcctggtgtttgacacgctg
atcccaaagcccatcatccagcggtacctcaacctgctgatggagcatcggcgcatcatc
ctctccggacccagcggcaccggcaaatccttcatggccgccaagctggccgagtacatc
ctctcccagatggggcagccggtgacggagcacaacgtggccagcttcaacgtggaccac
aactccagcaaggacctgcgtcagtacctgtccagcctggcggagcagtgcggctccgag
gacgcggactccgagccgcccaccgtggtgatcctggacaacctgcaccacgtcggctcc
ctcggagacatcttcaacggcttcctcaactgcaagtaccaccgatgcccgtatgtcatc
ggcaccatgaaccagggggtctcctcttctcccaacctggagctgcaccacaacttcagg
tgggtgctgtgcaccaaccacacggagcccgtcaaaggcttcctgggccgcttcctgcgg
cggaagctgatcgagacggagatccataagaacatgcgcagcaacgacctcatcaaggtc
atcgactggatccccaagacctggcagcacctcaacggcttcctggaggcacacagctcc
tccgacgtcaccataggcccccggctcctcctgtcctgccccatggacgtagaaggctct
cgggtctggttcaccgacctgtggaactactctctggtgccctacctgctggaggccgtc
agggaggggctgcagctctacggcaagcgagtggcgtgggaggacccgtccaagtgggtg
aaggacacgttcccgtggagcgccgccgccctgcagccggacggccaggcgctgctgcag
ctgaggccggaggacgtgggctacgacggctacagcgcctccaaggagggggccgcctcc
aagcaggtgtcccagagcgacaccgagggagaccccctgatgaacatgctgctgcggctg
caggaggcggctaactactccagcacgcagagctgcgacagcgacagcaccagtcaccat
gacgaccagctggactcctcgctggagtcggcgctatga
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