Pseudoliparis swirei (Mariana hadal snailfish): 130200693
Help
Entry
130200693 CDS
T09868
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130200693 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130200693 (apex1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130200693 (apex1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130200693 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
130200693
NCBI-ProteinID:
XP_056281150
LinkDB
All DBs
Position
10:complement(18103286..18106444)
Genome browser
AA seq
310 aa
AA seq
DB search
MKRGKKAAEEVADGENDADSGSAKKAKKAKEPEAPVLYEDPPDKMTSKDGRAANMKITSW
NVDGLRAWVKKSGLDWVREEAPDVLCLQETKCGEKSLPADITSMPEYPHKYWAASGEKEG
YSGTAMLCKTEPLSVAYGIGKEEHDKEGRVITAEFPAFYLVTAYVPNSGRGLVRLDYRKT
WDVDFRAYLSELDMQKPVVLCGDLNVAHREIDLKNPKGNKKSAGFTPEEREGLGQLLEAG
FADSFRELYPERANAYTFWTYMMNSRAKNVGWRLDYFILSASLLPGLCDNKIRNKALGSD
HCPITLHLAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggcagcggaggaggtggcggacggggagaatgacgccgactcc
ggctcggcaaagaaagccaagaaggcgaaggagcccgaggccccggttttgtacgaggac
cctcctgacaagatgaccagcaaagacggacgcgccgccaacatgaagatcacctcgtgg
aacgtggacggcctgagggcctgggtgaagaagagcggcctggattgggtccgcgaggag
gcgccggatgttctgtgcctgcaggagacgaagtgtggagagaaatcgctgccggccgac
atcacctccatgccagagtaccctcacaagtactgggcggcgtccggcgagaaggagggt
tacagcggcacggccatgctgtgcaagacggagccgctcagcgtcgcctacggcatcggc
aaagaagagcacgacaaggagggccgcgtcatcaccgccgagttccccgccttctacctg
gtcaccgcctacgtgcccaactccggccgcggcctcgtgcgcctcgactaccgcaaaacc
tgggacgtggacttccgggcgtacctgagcgagctggacatgcagaagcccgtggtgctg
tgcggcgacctgaacgtggcgcaccgggagatcgacctgaagaaccccaagggcaacaag
aagagcgccggcttcaccccggaggagcgcgagggcctgggccagctgctggaggccggc
ttcgccgacagcttccgcgagctgtacccggagcgggccaacgcctacaccttctggacc
tacatgatgaactcccgcgccaagaacgtgggctggaggctggactacttcatcctgtcg
gccagcctgctgccgggcctgtgcgacaacaagatccgcaacaaggcgctgggcagcgac
cactgccccatcacgctgcacctcgccgtgtag
DBGET
integrated database retrieval system
