Pseudoliparis swirei (Mariana hadal snailfish): 130200709
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Entry
130200709 CDS
T09868
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130200709 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130200709 (nup107)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130200709 (nup107)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130200709 (nup107)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130200709 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
130200709
NCBI-ProteinID:
XP_056281173
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Position
10:complement(2667878..2681502)
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AA seq
906 aa
AA seq
DB search
MDWGQSELLSPVVRDDEVTVAARRRRSKKVAFPSPGSPVLSTVTPARSMLRTTPASLFRQ
AVTPRVPDVSSILAPGGRTPRYTHTPRNALSSMNLDDSDWTNMYFSPVSGMENTSFFTDD
IANLSSALLKEDDPGEAAAASLFPEFLTSFLKHSSTAVFELLEDYQLLLQDKVDVLQSVV
LRAGQSSKTAGVRWLLQQENCSWRLITSLYRDRVQLALEDDIMTDMVVPSESEKVVVEQL
FQRDAIVRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHALKTRRKSSTAFSI
PLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQAWRAAT
LEGWKLYHDPNMTSVSVELQPVEGNPQRGIWKVCCWRMAEEEQLNRYERAIYAGLSGNLK
PLLAVCESWEDCVWAHFRVMVDSLVEKELMSSGMAHQEVETLPREYLEANWSMEKVFEEL
QASELKRVLEETKEHYHVIQKFVILGDLDGLLEEFSDWLTDSKPLPSHLLRFMTHMLLFY
RSLGLALKEEVSVDVLKAYVSLLIRDQQTDLVASYVSQLPAELATVQYAAFLETVVQPEL
RPRCLQLATDAGLDVAAVTKLVVETVREQDDTEFMHHSQTLEMGTTKEDLRKIDVIDWLL
FDPAHRAESLKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMREIYCQWSEVGQATPLPAE
DENAIREHLCIRAYLEAHEAFTEWFSHSSSAPQKPAPAPEAKFTERVANEMREKEYQAAL
SAWSGRLDVLTEDVKERIYNVLLFVNGGWMIDNRQDSEPDSERSHQMAALRSLCLPRLSF
LLLSVLQNSSRHQEALRLADIISCDQHRLHKVFSKESLRRFLQKLRESSLALLDRGLDPL
GYELQP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagagcgagctgctgtctccagtggtccgagacgacgaggtgacggtc
gccgcgcggaggaggcggagcaagaaggtggccttcccgtcgcccggcagccccgtcctg
tccacggtcacgccagcacgatccatgctgaggaccactccggcgtcactgttcagacag
gctgtgactcccagggttccagatgtttcctccattttggctccgggtggtcgaacacct
cgatacacacacacacccagaaacgccctgagcagcatgaatttggacgacagtgattgg
accaacatgtacttctcccccgtctcgggaatggagaacaccagcttcttcaccgacgac
atcgccaacctcagctccgccctgttgaaggaggacgacccgggcgaggccgcggctgcc
agtcttttcccagaattcctcacgtccttcctgaaacactcttccactgcagtgtttgag
ctgctggaggactaccagttactcctacaggacaaggtggacgtgctgcagtcggtggtg
ctccgagccggtcagagcagtaagacggccggcgtccgctggctgctgcagcaggagaac
tgctcctggagactcatcacctccctgtacagggaccgggtccagttggcgctggaagat
gacatcatgacagacatggtggttcccagtgagagtgagaaggtcgtggtggagcagctg
tttcagcgggatgccatcgtacgtcagagtcagctcgtcgttgattggctggagagcatc
gccaaggatcaaattggagatttctctgataatatagaatactacgccaagaacgtctgc
tgggagaacacccttcatgctctgaagacgaggagaaagagcagcaccgccttcagcatc
cccctggtcactgagctggacccagatgctcctctccggcagcagcgtcctctggccgac
ctcgacagagaggacgacgcccgactcctgaagaacctgttcaccctgatcagagccggg
atgaccgaagaggctcagaggctgtgtaagcgttgtggtcaggcctggagagcagcaact
ctggaaggctggaagctttaccacgaccccaacatgacctcagtgagtgtagagctgcag
cctgtcgaagggaaccctcagagggggatctggaaggtgtgctgctggaggatggccgag
gaggagcagctgaacagatacgagagagccatctacgccggtctcagtggaaacctcaaa
ccgctcctggccgtgtgtgagtcctgggaggactgtgtgtgggctcacttcagggtgatg
gtggactcgctggttgagaaggagctgatgtcgtcgggtatggcccaccaggaggtggag
acgctgccacgggaatacctggaggccaattggtcgatggagaaggtgtttgaggagctt
caggcctcggagttgaagagggtgttggaggagactaaagagcattaccacgtcatccag
aagtttgttatcctgggagacctggacggcctgttggaggagttttctgattggctgacg
gactctaagcccctcccctcccacctactgcgcttcatgactcacatgctgctgttctac
cgctctctgggtttggcgctgaaggaggaggtgagcgtggacgtcctgaaggcctacgtc
tccctcctgattcgcgaccagcagaccgatctcgtggcgagctacgtgagccagctgccc
gccgagctcgccaccgtccagtacgccgccttcctggagacggtcgtccagccggagctg
cgtccgcgctgcctgcagctcgccaccgacgccggtctggacgttgccgcggtaaccaag
ctggtggtggagactgtgagagagcaagatgacacagagttcatgcaccacagccagacg
ctggagatgggaaccacgaaggaggacctcagaaagatcgatgtcatcgattggctgctg
tttgaccccgcgcaccgagccgagtccctcaaacagtccaacgccatcatgaggaagttt
cttgctctgcagaaacacgacgccgccaaggccgtcttctccaaagtcccagaggactcg
atgagggagatctactgccagtggtcggaggtcggtcaggccacgcctctaccggccgag
gacgagaacgccatcagagaacacctgtgcatccgagcctacctggaagcccacgaggcc
ttcactgagtggttcagccacagtagctccgccccccagaagccagctcctgccccggag
gccaaattcaccgagagggtagccaatgagatgagagaaaaggagtaccaggccgctctg
tccgcctggtcgggccgcctggacgttttaacggaagacgtgaaggagaggatctacaac
gtgctgctgttcgtaaacggaggctggatgatcgacaacagacaggattcggagccggat
tccgagcgcagccaccagatggcggcgttgcgctctctgtgtctgccccgcctcagcttc
ctgctgctcagcgtgctgcagaactcctccagacaccaggaggcgctgcgcctcgccgac
atcatctcctgcgaccagcaccgcctccacaaggttttctcaaaggagtcgctgaggagg
tttctccagaagttgagggagtcgtcgctcgctctgttggaccgcggactcgatccactg
ggctacgagttacagccatga
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