Pseudoliparis swirei (Mariana hadal snailfish): 130200714
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Entry
130200714 CDS
T09868
Symbol
sema3aa
Name
(RefSeq) semaphorin-3aa isoform X1
KO
K06840
semaphorin 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_2
V-set
Ig_3
I-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
130200714
NCBI-ProteinID:
XP_056281185
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Position
10:complement(7210211..7241377)
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AA seq
861 aa
AA seq
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MDYLFGIVMLLCGAVQPGRGVEPKHNVPRLKLSYKEMLESSNLVTFNGLANSSSYDAFLL
DEERGRLLVGAEDHIFSFDLVNINRDQKQIAWPATPSKRDECKWAGKDLAKECSNFIRVL
QPFNQTHLYICGTGAFHPICSFLEMGKRAEENIFRLASHFENGRGKSPYDPKMLSASLLI
DGELYSGTSADFMGRDFAIFRTLGDQHPIRTEQHDSRWLNDPKFIGVHLIPESDNTEDDK
IFLFFKENAMDGEHTGKATIARIGQLCKNDMGGHRSLVNKWTTFLKARLKCSVPGVNGID
THFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMYNMADIRRVFLGSYAHRDGP
NYQWVPFQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARGHPAMYNPVHPIGGRPIM
VRTDMDYQFSQLVVDRVEAEDGQYDVMFIGTDIGTVLKVVTIPRESWHDLEEVVLEEMTV
FREPTPITAMELSTKQQQLYLGSGLGVSQMSLHRCEVYGKACAECCLARDPYCAWDGSEC
SRYFPTAKRRTRRQDIRNGDPLSQCSDLQHHDDTDGAGGSVEDRGVYGVENSSMFLECSP
KSQRALTYWQLQKPGEDRKHEIKLDDRVLRTDQGLLIRSLTQSDSGTYHCQAVEHGFIQP
LLRLNLQVIPAQKLGDILPGLPSAGGGVGHSPKHRLWYRDFLSLLDHPDLNSVEEFCDRV
WKKERKQKRVKTPNGNSQGKPDSTGGSNPALRPRALAPNAQKQQGSPPQSRPGPQAGGPT
VEGSPRNQTLQKGQPNLGMLSVQAPKNKQSSQKGQGGQAGSQAAGGSRVSSQHTAKWRRM
QENKKGRNRRTHELQRPPRSV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggattacctgtttgggattgtaatgctgctgtgcggggcggtgcagccgggaagaggt
gttgagcccaagcacaacgtacccagactaaagctgtcatacaaggagatgttagagtcc
agtaacctcgtcacgttcaatggcttggccaacagctcgagctacgacgctttcctattg
gatgaggagcgagggagactactggtcggagccgaggaccacatcttctcatttgacctc
gtcaacatcaacagagaccaaaaacagattgcgtggcctgctaccccctcgaagcgggat
gaatgcaagtgggcagggaaagacctcgcgaaggagtgttctaacttcatccgggtcctc
caacctttcaaccagacccacctgtacatctgtggcacaggagccttccaccccatctgt
tcttttctggaaatgggcaagagggcagaggaaaacatcttccgactggcctcgcatttc
gagaacggccgcgggaaaagcccctatgaccccaaaatgctctcagcctcgcttctgatc
gatggagagctgtactctggcacatctgctgatttcatgggaagggactttgctattttc
cgtactctgggagatcaacatccaattagaaccgagcagcacgattcaagatggctcaac
gaccccaagttcatcggcgttcacttgatcccggaaagtgacaacaccgaagacgataag
atctttctgtttttcaaggagaacgccatggacggagagcacactggcaaggctaccatc
gccaggataggacaactgtgtaagaatgacatgggaggtcacaggagtctggtgaacaag
tggactaccttcctgaaggcccggctaaagtgttcagtgccaggggtcaacggcattgat
acacactttgatgagctgcaggatgtgtttctcatgagctccaaggatccaaagaaccca
gttatatacgcagtattcaccacatccagtaacatctttaaaggctcggcagtgtgcatg
tacaacatggccgacatcaggagggttttcctgggttcctacgcccacagagatggaccc
aactaccagtgggtgcctttccaggggagggtgccctacccccgccccggcacttgcccc
agcaagacatttgggggattcgactccaccaaggacctccctgatgatgtcatcaccttc
gccaggggtcacccagccatgtacaacccggtgcacccgataggcgggcgtcccatcatg
gtgcgaaccgacatggactaccagttctcccagctggtggtggacagggtggaggcagag
gacggacagtatgacgtcatgttcatcgggacagacattggcacagtactgaaggtggtg
acgatacccagagagagttggcatgacctggaagaggtggtgctcgaagaaatgaccgtc
tttagggagcccactcccattactgctatggagctgtctaccaagcagcaacagctgtac
cttggctctggcctgggcgtatcgcagatgtctttacatcgctgtgaggtgtatgggaaa
gcttgtgcagagtgctgcctggccagagacccttattgcgcctgggatggcagcgaatgc
tcgagatactttcctaccgccaagaggcgaaccagacgacaggacatcaggaacggagac
cctctctcccaatgctcagaccttcagcatcacgacgacacggacggcgccggaggcagc
gtggaggaccgcggtgtgtacggcgtggagaacagcagtatgttccttgagtgcagccca
aagtctcagagagcgctcacgtactggcagctacagaagcccggcgaggaccgcaagcac
gagatcaagctagatgacagggtgctccgtacagaccagggtctgctcatacgcagtctg
acccagtccgactcaggtacctaccactgccaggctgtggagcacggcttcatccagccc
ctactgcgcctcaacctccaggtcatccctgcacagaaactgggcgacatcctacccgga
cttcccagcgcaggaggcggggtcggtcactctcccaagcacaggctgtggtatcgcgat
ttcctgtctctcttggaccacccagacctcaacagcgtggaagagttttgcgatcgagtt
tggaagaaagaacgcaaacagaagagggtgaagacgcccaacggaaacagccagggcaag
cccgacagcaccggcggctcaaaccctgcattacggccgagagctttagctcccaacgcc
cagaagcagcaaggcagtccgccacagagcaggccagggccccaggctggagggccaaca
gtggaagggtcaccacgaaaccagactctccagaaaggtcaaccaaacctgggtatgttg
agtgtccaggcgcctaagaacaagcagagcagccagaaggggcagggcggccaggctggt
tctcaggctgcgggggggtcgagggtgagcagccagcacacagccaagtggagacggatg
caggaaaataagaagggacgcaacaggaggacccatgagcttcaaagacccccgcgaagc
gtttga
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