Pseudoliparis swirei (Mariana hadal snailfish): 130200766
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Entry
130200766 CDS
T09868
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130200766 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
130200766
NCBI-ProteinID:
XP_056281267
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Position
10:complement(6517079..6533578)
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AA seq
817 aa
AA seq
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MIWRLVVLLHVLLLGAESSNRGGRTVTFHRTQQDDSQDRARARTRRETRPFHGPPFTSCR
TPLTPVEHKVLDDNTHETGFNGDDGSYVILTWVGDGTGVVLVLSTFSAPIDSFIEGGSSR
LYRSTDYAKSFHDISHQINNTFIREEFGVSVGPGSSVILTADIPVVYNRGGIIFISTDAG
ATFKFIQLPFHLAQPITYHFLNPDYLVALSIDGGLWLSLDFGAKWTKVHDGVHSFSWGAG
INLFFSRSRTDAVEAEERGDLLLKRTTDLGKTFTTIHEDIFSFGYIGAFLFFSVMEDPRS
PRVMYFSSDQGETFSRALLPSASTEQFYSILDGDVDMLFMHVDNPGDTFFGTMYTSDDRG
ILFSKSLERHLFDGQRKSDFTNITSLRGVYLTNKLDEDGRIRSVISFNRGGTWRHLNKPE
NVECGEQVKNCNIHIHGEHSRNIRIVPMLALSEPTAIGLVIAHGTVGDSLSSSQHPDVFV
SSDGGYNWRGTLRGPHHYSILDSGGLIVAVEAQREGQVKTIKFSTDEGQCWKSYNFTEQP
FFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECHEEDYEEWLAHAT
GGGDLKRNGCLLGVKETYRRLKKPSVCRNGRGFVVSKKQSPCLCTRADYLCDYGYDRHAN
TSECVRQRSAANKTLELCLNGEEDELLTAGYRKVPSDRCEGGFSPQLAVQTVIRPCGVKP
SPGPPARSSSPVTHFDTPRERLVLILVCAGAGVIVLVVIVSAVFAVRRVVYRNRSPVYRF
SNLRIQDEDNGTTADLESATSSNGTACLQESDDDLIE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatctggagactcgtggtcctcctgcacgtccttcttctgggagctgaaagcagcaac
cgcggggggaggacggtgactttccaccggactcagcaggatgacagccaggaccgagcg
cgcgcacgcaccaggagggagacgaggccgtttcacggaccccccttcacctcctgccgg
acccccctcacccctgtcgagcacaaggttctggatgacaatacgcatgagaccggtttt
aacggcgatgacggctcctatgtcatcctcacatgggtgggcgacggcaccggggtcgtc
ctggtgctgtcaacatttagcgctccgatagattcgttcatcgaaggcggctcctcgcga
ctttatcgaagcacggattatgcgaaatccttccacgacatttcccatcagatcaacaac
accttcataagggaggagtttggagtcagcgttggaccagggagctctgtgattctgaca
gcagacattccggtggtgtataaccgaggcgggatcatcttcatctccacggacgccggc
gcgaccttcaagttcatccaactgcccttccacctggctcagccgatcacgtaccacttc
ctgaacccggactacctggtggcactcagcattgatggcggtctgtggctctctctggac
tttggcgccaagtggacaaaagttcatgatggagtgcattctttctcatggggggccggc
attaacttgttcttcagccgcagtcgaaccgatgcagttgaggccgaagagagaggggat
ctcctgctgaagaggacaacagatctggggaagaccttcaccacgatccacgaggacatc
ttcagttttggctacataggagcctttctcttcttctccgtgatggaggatccgagatcc
cctcgtgtcatgtatttctcgtcagaccaaggagaaaccttcagtcgagcgctgctcccc
tctgcctccactgagcagttctactccatcctggatggagatgtagatatgctcttcatg
catgtggacaacccaggagacactttctttggaaccatgtacacatcagatgaccgaggc
atcttgttctccaaatccctggagcgccacctgtttgacgggcagaggaagagcgatttc
accaacatcacgtccctgagaggagtctacctcacgaacaaactagacgaggatgggcgt
atcagatctgtcatttcctttaatagaggagggacatggagacacctgaacaaacctgag
aatgtggaatgtggggagcaagtcaaaaattgcaacattcatattcacggagagcacagt
cgcaacatccgcatcgttcccatgctggctctgtctgagccgacggctattggtctggtt
atcgctcacggcactgtgggcgactctctgtcatcgtcgcagcaccccgatgtgtttgtc
tcctcagacgggggttacaactggagggggacactgagaggtcctcaccactacagcata
ttggactctgggggtctcattgtggctgtggaggcccagcgtgaaggacaagtcaagact
atcaagttctccacagacgagggccaatgctggaagtcctacaacttcacggaacagccc
ttcttcttcgcaggcctggcgtccgagccggggaccaaggccatgaacgtcagcgtgtgg
ggcttccgtcccgaggaggacggccagcccatgtgggtggccgtcaccattgacttccag
agtctcattacgagagagtgtcacgaggaggactacgaggagtggttggctcatgcgact
ggcggaggagacctgaagagaaacggatgtctcctgggggtcaaggagacctaccggagg
ctaaagaaaccgtctgtgtgcagaaatggccgaggcttcgtggtgagcaagaagcaaagc
ccctgcctgtgcaccagagcagattacttatgcgactacggttacgatcgtcacgcgaac
acctcagagtgtgtgaggcaacgcagcgctgcaaataaaaccttggagctgtgtctgaac
ggagaggaggatgagctgctgacagcagggtaccgcaaggtcccgagtgatcggtgtgag
ggggggttcagtcctcagctcgcagtgcagacagtcatcagaccctgtggtgttaaaccc
agccccgggccacctgccaggtcctcgtctccagtcacacactttgacacaccgcgagag
aggctggtgttgatcctggtgtgtgcaggagcaggggtcatcgtcctggttgtgatcgtt
tccgccgtcttcgctgtcagaagggtggtttacaggaacaggtcgccagtgtatcgtttc
tccaacctccggattcaggatgaagacaacggcaccacggccgatcttgaaagcgccacc
agcagcaatggcacggcctgcctgcaggaatcagatgatgaccttatcgaatga
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