Pseudoliparis swirei (Mariana hadal snailfish): 130200840
Help
Entry
130200840 CDS
T09868
Symbol
pphln1
Name
(RefSeq) periphilin-1 isoform X1
KO
K21872
periphilin-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130200840 (pphln1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130200840 (pphln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Periphilin_C
Motif
Other DBs
NCBI-GeneID:
130200840
NCBI-ProteinID:
XP_056281379
LinkDB
All DBs
Position
10:12335391..12360815
Genome browser
AA seq
437 aa
AA seq
DB search
MWRWEAKKPIPTAETEEIDLVDCFIFSITPIPEVLKSKMTYRRDRSIREVYDDRFLAERP
GPYPRAAGAPERRGPFGRPEEDYGRGGYEYEGGPRFFPNGGGQRNYHEEQRGYHGDNVHF
SAERRAVPPARREDYPYRGPREDPHPGRPLEFGARAPPPPPPPHNVRNQGVYPAARSLPE
SGEDTLVQAILNLDKGEDRDPFRRKVAPFPPPRERSPARREMACSPQSRSGSSVSSRGYS
PDRAKSLPVPSQQDKNVDGPEVVSEHHWGAHYSQQSGHETLDKIPGLSREGSPHSATSNK
EEHHPPEAETEEPPVVPVVEESQKSSPDNFQERRALAIAAKAQEIEKVYQQDCETFGMVV
KMLVAKDPNLEKQLQVPLRENLGEIRDRCLEDLKHFINELDEVVRQSEPSVCDSTTSSTA
LTGHKLSKTGVNHSSSY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtgggaagctaagaagccaatacccacggcggagacggaagaaattgatttg
gttgactgttttattttctctatcaccccgattccagaggtccttaaatccaaaatgacg
tacaggagagacaggagtatacgagaggtgtatgatgatcgctttttggcagaaagaccg
ggtccttacccacgggcagctggggcaccagagagaaggggcccctttggcaggccggaa
gaggactatggccgtggcgggtacgaatacgaaggaggtccacgcttttttccaaatgga
ggaggccaacgaaattatcatgaagagcagaggggctaccatggggacaacgttcacttc
tctgctgaacgcagagctgttccacctgcaaggagggaggactacccttacagagggccc
agggaggacccgcacccaggacggcctttggagtttggcgcgcgagcgccgccgccgcca
ccgcctcctcacaacgtgcgaaaccagggcgtctacccagcagcccgatcactcccggag
agcggggaagacacactagtgcaagccatcctcaacctggacaaaggggaggacagagac
cccttcaggagaaaggtggccccgttccctccacccagggagcgctcgcctgcgcgccgc
gagatggcctgttccccccagagtcgctccggctccagcgtcagcagcaggggctactcg
ccagaccgagccaagagcctgccggttccctcgcagcaggacaagaatgtggacggtcca
gaggtggtgtctgagcaccattggggggcgcactattcccaacagagtggacatgaaact
ttggacaaaattcccggcctgtcaagagaagggtccccacacagcgcgacctcgaacaag
gaggagcaccatcctccagaagcagaaacagaggagcccccggtggttccagtcgtcgag
gagagccaaaagtcgtctccggacaactttcaagagcgacgggccctcgccatcgcagcc
aaagctcaggagatagagaaggtgtaccagcaggactgcgagacattcggcatggtggta
aagatgttggtggccaaagaccccaacctggagaagcagctgcaggttcccctcagggag
aacctcggggagatccgcgatcgttgcctggaggacctgaaacacttcatcaacgagctg
gacgaggtggtccggcagtcggagccttccgtttgtgactcgaccacctcgtcaacagca
ctgacgggtcataaactctcaaagacgggagtcaatcacagctcgtcttactga
DBGET
integrated database retrieval system
