Pseudoliparis swirei (Mariana hadal snailfish): 130200857
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Entry
130200857 CDS
T09868
Symbol
lrp6
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04150
mTOR signaling pathway
pswi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130200857 (lrp6)
04150 mTOR signaling pathway
130200857 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130200857 (lrp6)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130200857 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
130200857
NCBI-ProteinID:
XP_056281410
LinkDB
All DBs
Position
10:complement(699158..736380)
Genome browser
AA seq
1488 aa
AA seq
DB search
MGVALRSLLLCSLWLLVRGVPLLLYANRRDLRLVDAAAAAANATVVVGGLEDAAAVDYVX
YAQGLIYWSDVSEEAIKRTVFNQSGAGAVQTVVPGLASPDGLACDWLGSKLYWTDSETNR
IEVAELDGSLRKVLFWQELDQPRAIALDPERGFWIVITVVPCPCSHDNGGCSHLCLLAPV
EPSYRCACPTGVQLLGDGKTCRDGATQMLLLARRTDLRRISLDTPDFTDAVLPLDDVRHA
IAIDYDPVDGLVYWTDDDVKAVRRSRLDGSESQFVVTSQVNHPDGIAVDWIARNLYWTDT
GTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERAELDGLQRV
VLVNTSLGWPNGLALDYEDRRLYWGDAKTDRIEVMALDGSGRRVLLEDKLPHIFGFTLLG
DFIYWTDWQRRSIERVHKATAAREVLVDQLPDLMGLKAAYVHQTFGTNPCAESNGGCSHL
CLYRPQGVQCGCPVGLELVADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPLTGVK
EASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWA
DTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAMDGTG
RLTLVADVGRANGLTIDYAERRLYWTDLDTTLIESANMLGQDREVIADDLPHPFGLTQYQ
DYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAATNGHCSH
LCLAVPITGFVCGCPAHFSLNPDNKTCSAPTSFLLFSQKTAINRMVMDEQQSPDIILPIH
SLRSVRALDYDPLDRQLYWIDSKQNLIRRAQEDGNQSTTVVSSSLGGPSQGLQLYDLSID
IYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLERSPK
IERAALDGTEREVLFFSGLGKPVALAIDNQLGKLFWADSDLRRIESSDLSGANRIVMADS
NILQPVGLTVFGDHLYWIDKQQQMIERIHKTSREGAQDQGRMSIELGGIHAVHELDMREY
SKHPCTWDNGGCSHICLVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCSSGEVD
CIPEAWRCDGYAECDDGSDEAACPLCSGAEFQCDSRQCVSAALRCDGAADCQDRSDEGRC
EVRCPPDQFSCSSGQCIGKHKKCDHNTDCTDNSDEIGCYPTEEPPPPSSHAVGSVVGVVL
ALLLVGAVYFVCRRVLCPRLKDDGETAATDFAAHGPAPLPLGYVPQPGSLPGMSRGKSVI
GSLSIVGGSGGPPYDRAHVTGASSSSSSSTKGTYFPPVLNPPPSPATVRSQYTMEFGYSS
NSPSTQRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGLRAPPTSGAARGYGSDPQYDSE
PFPPPPTPRSQYLSAEENCESCPPSPFTERSYAHHLYPPPPSPCTDSS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgcgctgcggagcctgttgttgtgctcgctgtggctcctcgttcgaggcgtg
cccctgctgctctacgctaaccggcgtgacctccgcctcgtggacgcggcggcggcggcg
gccaacgccacggtggtggtgggcgggctggaggacgcggcggccgtggactacgtgtag
tacgcccagggcctcatctactggagcgacgtgagcgaggaggccatcaagcgcaccgtg
ttcaaccaatcgggggccggcgccgtgcagaccgtggtgcccggcctggcctcccccgac
gggctggcctgcgactggctgggcagcaaactgtactggaccgactcggagaccaaccgc
atcgaggtggccgagctggacgggtccctgaggaaggttctgttctggcaggagctggac
cagccgagggccatcgccctggacccggaacgagggttctggatagttattacagtggtg
ccgtgtccctgctcccatgacaacggtggctgctcccacctgtgcctgctggcccccgtg
gagccgtcctatcggtgcgcctgtcccaccggagtccagctgctgggggacggcaagacc
tgcagagacggtgcgactcagatgctgctgctggcccggcgcaccgacctgcgccgcatc
tctctggacacgccggacttcacggacgccgtgctgccgctggacgacgtgcggcacgcc
atcgccatcgactacgacccggtggacgggctggtgtactggacggacgacgacgtgaag
gccgtgcggcgctcgcggctcgacggcagcgagtcgcagttcgtggtcacgtcgcaggtc
aaccaccccgacggcatcgccgtggactggatcgcccggaacctgtactggaccgacacc
ggcacggaccgcatcgaggtgacccggctcaacgggaccatgaggaagatcctgatctca
gaggacctggacgagcccagagccatcgtgctggaccccgtggccggctacatgtactgg
acggattggggcgaggtccctaagatcgagcgggccgagctggacgggctgcagcgcgtg
gttctggtcaacacgtctctgggctggcccaacggcctggccctggactacgaggaccgc
cggctgtactggggggacgccaagacggaccggatcgaggtgatggccctggacgggtct
ggccgccgtgtcctgctggaggacaagctgccgcacatcttcggcttcacgctgctgggc
gacttcatctactggacggactggcagcggcgcagcatcgagcgcgtgcacaaggccacg
gctgcgagggaggtcctcgtggaccagctgcccgacctcatgggcctgaaggccgcctac
gtgcaccagaccttcggtaccaacccgtgtgccgagagcaacggcggctgcagccacctg
tgcctgtaccggcctcagggggtccagtgcggctgccccgtgggcctggagctggtggcc
gacatgcggacctgcatcgtgcccgaggccttcctgctgttctcgcgccacaccgacatc
cgccgcatctccctggagaccaacaacaacaacgtggccatcccgctcaccggcgtcaag
gaggcctcggcgctcgacttcgacgtcaccgacaaccggatctactggaccgacatcacg
ctgaagaccatcagccgcgccttcatgaacggcagcgccctggagcacgtggtggagttc
ggtctggactacccggaggggatggcggtggactggctggggaagaacctgtactgggcc
gacaccggcaccaaccgcatcgaggtggccaagctggacggacagcaccggcaggtcctg
gtctggaaggacctggacagccctcgagcgctggccctggacccggctgaagggtacatg
tactggaccgagtggggcgggaagcccaagatcgaccgcgcggcgatggacgggacgggc
cgcctcacgctggtggccgacgtgggccgagccaacgggctcaccatcgactacgcggag
cggcgcctctactggacggacctggacacgacgctcatcgagtccgccaacatgctgggt
caggaccgcgaggtgatagcagacgacctgccccaccccttcggcctgacccagtaccag
gactacatctactggaccgactggagccagcgcagcatcgagcgggccaacaagaccagc
ggccagaaccggaccgtgattcagggacacctggactacgtgatggacatcctggtgttc
cactcgtcccgccagggtggctggaacgcctgcgccgccaccaacggccactgctcacac
ctctgcctggctgtgccaatcacaggcttcgtctgcggatgccccgcccacttctccctc
aaccccgacaacaagacctgcagcgcccccacctccttcctgctgttcagccagaagacg
gccatcaaccgcatggtgatggacgagcagcagagccccgacatcatcctgcccatccac
agcctgaggagcgtccgggcgctggactacgacccgctggaccgccagctgtactggatc
gactccaagcagaacctgatccgccgtgcccaggaggacgggaaccagagtaccacggtg
gtctccagctccctgggggggcccagccagggcctgcagctgtacgacctgagcatcgac
atctacagccgcttcatctactggaccagcgaggtcaccaacgtcatcaacgtcacgcgc
accgacggcagccgggtgggggtggtgctgaggggggagcacgacaagccccgcgccatc
gtggtcaacccggagagagggtacatgtacttcaccaacctgctggagcgctccccaaag
atcgagcgcgcggcgctggacgggacggagcgcgaggttctgttcttcagcggcctgggg
aagcccgtggcgctggccatcgacaaccagctggggaagctgttctgggcggactcggac
ctgcggcgcatcgagagcagcgacctgtcgggagccaatcgcatcgtgatggccgactcc
aacatcctgcagccggtgggcctgacggtgttcggggaccacctgtactggatcgacaag
cagcagcagatgatcgagaggatccacaagaccagcagggagggagcacaggatcagggc
cgcatgagcatagagctggggggcatccacgcggtgcacgagctggacatgagggagtac
agtaaacacccgtgtacctgggataacggcggctgctcccacatctgcctcgtgaagggc
gacgggacgacccgctgctcgtgtcccgtccacctggtgctgctgcaggacgagctctcc
tgtggagagccccccacctgctccccggagcagttctcgtgctcctccggcgaggtggac
tgcatccccgaggcgtggcgctgcgacggctacgccgagtgcgacgacggcagcgacgag
gcggcctgcccgctgtgctcgggggcggagtttcaatgtgacagccggcagtgtgtgagc
gccgcgctgcgctgcgacggggcggcggactgccaggaccggtccgacgagggccgctgt
gaggtccgctgccctccagaccagttctcctgctctagcggtcagtgcatcgggaagcac
aagaagtgtgaccacaacacggactgcacagacaactctgacgagatcggctgctacccg
acggaggagcccccgcccccctcctcccacgccgtgggctcagttgtgggcgtggttctg
gcgctgctgctggtgggcgccgtgtacttcgtgtgccggcgcgtcctctgccctcggctg
aaggacgacggcgagacggcggccaccgacttcgcggcccacgggccggcgccgctgccg
ctgggctacgtgccgcagcccggctcgctgccgggcatgtccagggggaagtccgtgatt
ggctccctcagcatcgtgggcgggagcggcgggccgccgtacgaccgcgcccacgtcacg
ggggcgtcgtccagcagctcgtccagcaccaaggggacgtacttccccccggtgctgaac
cctcctccctctccagcgacggttcgctctcagtacacgatggagttcggttactcctcc
aacagcccctcaacacagaggtcctacagctaccgtccctacacttaccgacactttgcc
ccgcccaccacgccctgcagcaccgacgtgtgcgacagcgactacacgccgggcctccgg
gctccgcccacatccggcgccgcccgaggatacggcagcgacccgcagtacgactcggag
ccgttcccgccgccgcccacgccgcgcagccagtacctgtcggcggaggagaactgtgag
agctgcccgccgtcgcccttcacggagcgcagctacgcccaccacctgtacccgccgccg
ccatcgccctgcaccgactcctcctga
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integrated database retrieval system
