Pseudoliparis swirei (Mariana hadal snailfish): 130200878
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Entry
130200878 CDS
T09868
Symbol
ckap4
Name
(RefSeq) cytoskeleton-associated protein 4
KO
K13999
cytoskeleton-associated protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130200878 (ckap4)
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Motif
Pfam:
Baculo_PEP_C
CENP-F_leu_zip
Cluap1
CCDC22_CC
Prominin
AIP3
Filament
Fez1
CLZ
DUF3584
ATG17_like
AF0941-like
BLOC1_2
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
130200878
NCBI-ProteinID:
XP_056281427
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Position
10:4323931..4327257
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AA seq
579 aa
AA seq
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GPALETFPIHDFTTPAALSFLSLSLSNTHTHTHAHTHTPVAELPLKMKNRNKNISSEKSP
SAAAPPDDAPKKSPKSAAGNASSGGGGGPGPLQGSSSGSGSCLGLVATAVFYVALLGAAG
FAALHVQRVVEELRETGAGHAESARRSVELSGQMESVVQQVESLSSVVDGLESSLGITRV
ELEAAVGRMKRGEVETRKVEEALQKLQNNLLRELSEGMNEVKEARERDFSSLEKTVEERL
AEVSQSIAANVAEFTEAQGEARSQMAELAARLGDAEDPALIKEELSAIVGAVAEITASQR
ASDASADSIREQVVTVRSELQTRNQEVASLSQEVESVRSVVQESIGHLRQSLSATEADVQ
ALKDESAALGSGVERAADAARSAEKQAREEAAQVQRRSEDLEGRVKTSEEAGDSLSASVA
DIGAKVESLFAKSDAHESALAAQGQNVEKVKSGVEQDVEALKSGLEELQSNMATLASAQT
KLSSKDSSMGQRAAALEERLAALEVSSGGSVKPEQLQGLRSAVAGLEAEAAKLEGHDRAI
SALQKTLQETTETLAGLSEGGVGTVESAVLEDAPTNMKT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ggtccggcactggagacgttccccatccacgacttcaccacaccagcagctctctccttt
ctctctctctctctctctaacacacacacacacacacacgcacacacacacactcctgtt
gccgagctcccattgaagatgaaaaaccgaaacaagaacatctccagcgagaagagccca
tccgccgccgctcctcccgacgacgcgccgaagaaaagccccaagagcgcggcgggcaac
gcgtcgagcggcggcggcggcggccccgggcccctgcaggggtcgagctccgggtccggg
agctgcctgggcctggtggccaccgcggtgttttacgtggcgctgttaggcgccgctgga
ttcgctgctctccacgtccagcgggtcgtggaggagctcagggagacgggcgccgggcac
gcggagagcgcgcgtcgcagcgtggagctgagcggccaaatggagagcgtcgttcaacag
gtggagtctctgagcagcgtggtcgacgggctggagtcgtcactgggcatcacgcgggtg
gagctggaggcggcggtcggccgcatgaagaggggcgaggtggagacgaggaaggtggag
gaggccctccagaagctccagaacaacctcctgagggagctgtcggagggcatgaacgag
gtgaaggaggcccgagagagggacttctcctccctggagaagaccgtggaggagcggctg
gccgaggtgagtcagtccatcgcggccaacgtggcggagttcaccgaagcccagggcgaa
gcgcggagccagatggccgagctcgccgcccgcctgggcgacgcggaagaccccgcgctc
atcaaggaggagctgtcggccatcgtcggcgccgtggcggagatcacggcgtcccaacgg
gcctccgacgcctcggccgactccatcagggaacaggtggtcaccgtgaggtccgagctc
cagactcgtaaccaggaagtggcctcgctgtctcaggaagtggaatcggtgaggtccgtg
gtgcaggagtccatcgggcatctcaggcagtcgctgtccgccaccgaggccgacgtccag
gccctgaaggacgagagcgcggcgctggggagcggcgtggagcgggccgccgacgccgcc
cgcagcgcggagaagcaggcgcgggaagaggccgcgcaggtccagaggaggtcggaggac
ctggagggccgggtcaaaacgtcggaggaggccggagactcgctgtcggcgtccgtggcg
gacatcggcgccaaagtggagtcgctgttcgccaagagcgacgcccacgagagcgctctg
gccgcccaggggcagaacgtggagaaggtcaaatccggcgtggagcaggacgtggaggcg
ctgaaaagcggcttggaggagctccagtccaacatggccaccctggccagcgcccagacc
aagctgtcgtcgaaggactccagcatgggtcagcgggcggcggcgctggaggagaggctc
gccgccctggaggtcagcagcggcggcagcgtgaagccggagcagctgcagggtctgagg
agcgcggtggccgggttggaggccgaggcggccaagctggagggccacgaccgggccatt
tcggcccttcagaaaaccctgcaggagaccacggagacgctggccggcttatccgaaggc
ggagtcgggacggtggagtcggcggtccttgaggatgcaccaacaaacatgaaaacatga
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