Pseudoliparis swirei (Mariana hadal snailfish): 130200887
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Entry
130200887 CDS
T09868
Symbol
caprin2
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
KO
K18744
caprin-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130200887 (caprin2)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130200887 (caprin2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
130200887
NCBI-ProteinID:
XP_056281435
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All DBs
Position
10:complement(7742442..7759043)
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AA seq
980 aa
AA seq
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MVQLSPSQSPSVAPPSECTEEGQERQENLLVADHHPTVCPPGLLALQLSLETSTVYYGYE
SYIEDGLICLKHKVRNLEKKKLKLKDYKKRLNWGEELNKDQKEAVEKYEEVLHNLAFAQE
LHKSLDVLTQDLLRAQKKAMRKEQVVKEETERRQLSTVLQMQHLLHCMQQEHVRKDLLAG
HNQAPHIAAQKLHGLNQLATLLGFKRDNGLSLEEQMAQAALAYLDLLEGKDEPVAGSTFK
LFKEELTRLLKYKYFSSVPRPPNKSQEELLRQNSTPSKLKPNEVSKVLGNGLYQSEAETA
PTQNWKADFQTREREPPDRWDMEFLDGPGSLQAAGPKPWKGAATFIPKVPVATKKQHIDD
NKKKETRAKSKQLAKSAVHMGMPVEVFSSKCALPKDPELRKRHLEDFMTKIHGSFSFMQD
SLLNGDLSLTNDHQGLKRLPSGSPLPLDHTDLRSPVAILPKLMHSTPLPIRLLECKTSLT
NEDRCLEILDLKLSSTNLPNIPLTESRKQTTLKNEDRCLEILDLKLSSTNLPNITLTESR
KQTSLTNEEQCLEICDLKVSSTNRPHITLTESRKQTSLTNEEQCLEICDLKLSSTNLPCI
PLTESRKQSPCNGMASCTATSPHGQTFSTPPSRRTLTSAHFPNIQPVFKVTASLPQNGAL
NYKPDSGIFDTPRYNFASTQTPPEFAPSEDEPQLMYQSDYTVGDGGPIFLSPGLSSRCHP
SESYYTRGSVRGMALXCKGLAQPFRSSCWHXGESYTPQTDLRDSVPLLYAARDSGYQHSY
RRGGGRHNSSAVWSDSSQVSTPDRETAFTIVDSGHGDSLSVSTVEVPLTPHGHHHTLLPM
QLYPLSQPLRVAFNASRTANYAPGNLDQPIVFDQLHSNLGEMYDPHIGRFTCPANGTYVF
LFHILKLAINVPLYINLMCNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWIRLHRG
AIYGSTWKYSTFSGFLLYQD
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccttcccagagtccaagtgtcgcccctccatccgaatgcacagaa
gaggggcaggaaagacaggagaacctgctggtggctgatcatcacccgacggtgtgccca
cccggtctccttgccctgcagctcagcctggagacctccactgtctactatggctatgaa
tcctatattgaagatgggctcatctgcctcaaacacaaagtccgcaatttggagaaaaag
aagctgaaacttaaagactacaagaagaggttgaactggggtgaggaacttaacaaggat
cagaaggaggctgttgaaaagtacgaggaggtgctgcataatctggcatttgcacaggag
ctccacaaaagcctggatgtcttgactcaggatttgctgagagcccagaagaaggcaatg
agaaaggagcaagtggtgaaggaggagactgagaggaggcaactgagtactgtgctgcag
atgcagcacctcctacactgcatgcagcaggagcacgttagaaaagacctgctggctgga
cacaaccaggcgccacacattgcagcccaaaagctgcatggccttaatcagcttgctacc
ctactggggttcaagagggataacggactgagtttagaggagcagatggcgcaagcggct
ctggcctatttggacctgctagaggggaaggatgagccagtggctggatccacatttaag
cttttcaaagaagagctcaccaggctgttgaagtacaagtacttcagttctgttccacgt
ccacccaacaagtctcaagaggagttactcaggcagaacagcaccccatctaagttgaaa
ccaaatgaagtttctaaggtgcttggtaatggactgtaccagagtgaagcagagactgct
cctacacagaactggaaggcagacttccaaacaagggagcgggagcctccggaccgctgg
gatatggagtttttagatggacctggctcactccaagctgcaggccccaaaccatggaaa
ggagctgccacttttatccccaaggtcccagttgccaccaagaaacaacatattgacgac
aataagaaaaaagaaactagggccaaaagcaagcaacttgccaaatcggctgttcacatg
ggtatgcctgtggaggtgttcagctctaaatgtgccttacccaaagaccccgaactgagg
aagcggcaccttgaggacttcatgacaaagatccatggctccttcagttttatgcaggac
tctcttctgaatggtgatctctcccttactaacgaccatcaaggactgaagagactgccg
tctgggtctccattgcctctggatcacacggatttgaggagccccgttgctatcctgccc
aaattaatgcattcaaccccactgcctatcaggcttctggagtgcaaaaccagtctgaca
aatgaggatcggtgtctggagatcttagacctgaagctttcctcaacaaacttacctaat
atcccattaactgagtcaaggaaacaaaccactttgaaaaatgaggatcggtgtctggag
atcttagacctgaagctttcctcaacaaacttacctaatatcacactaactgagtcaagg
aagcagaccagtctgacaaatgaggaacagtgtctggagatctgtgacctgaaggtttcc
tcaacaaaccgacctcatatcacactaactgagtcaaggaagcagaccagtctgacaaat
gaggaacagtgtctggagatctgtgacctgaagctttcctcaacaaacctaccttgtatc
ccattaactgagtcaaggaagcagtcgccttgtaatgggatggcatcttgcactgccacc
tcccctcatggacaaacgttctcaacaccccccagcaggcgaactctgacatctgcccat
tttcccaacatccagcctgtcttcaaggtgactgcctccttacctcagaatggggcattg
aactacaaaccagattctggcatttttgatacgcccaggtacaactttgccagtacccaa
acgccaccagagtttgctccctcagaagacgaaccacagctaatgtaccagtcagactat
acggtgggtgatggtggaccgatcttcctgtcccctgggctgtcaagtagatgtcatccc
agcgagtcgtactacaccagaggatctgtgagaggtatggcactgnnctgcaagggactg
gcacaaccctttcgctcttcttgttggcattgaggagaatcctacacccctcagacggat
ctcagagactctgtccctctcctctatgctgctagagactctggatatcaacacagctac
agacgcggaggagggaggcataactcgagtgcagtctggagtgactcttcacaggtgagc
acaccagaccgagagacagcttttacaattgtggactcgggtcatggggattccctgtct
gtctccactgtggaggtccctctgactccccatggccaccatcacaccctgcttcccatg
caactctacccgctctcccagccgcttcgagtggccttcaatgcctctcgcactgccaac
tacgcccctggaaacctggaccagcccatcgtgtttgaccagttgcacagcaaccttggg
gagatgtacgacccccacattggccgctttacctgtcccgccaatggaacctatgtcttc
ctcttccacatcctgaagctcgccatcaacgtgcccctctacattaacctcatgtgcaac
gaagaggtcatggtctctgcgtatgccaacgatggagccccagatcatgagacggctagc
aaccatgccatcctgcctctcttccaaggagaccaggtgtggatccggttgcatcgtggc
gccatctatggcagcacctggaagtatagtactttctctggctttttgctgtaccaggat
tga
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