KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130200961
Entry
130200961         CDS       T09868                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130200961 (larp1b)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130200961 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La ACC_central
Other DBs
NCBI-GeneID: 130200961
NCBI-ProteinID: XP_056281485
LinkDB
Position
11:complement(15585239..15611713)
AA seq 1023 aa
MSTRVGSCLTAEEEREGPREPQQQQQPTDGPGSSGVERRARRSSGGSSPPEEGDEPRDAD
GSKVEAAADRVVEAPPPKVNPWTKRTTGRLPVNNNNNVHNNPQGPPEKHLQNTLKVVRAN
KPRMRKSSKSGDFSDITNWPTPGELAKEQQQNVLNNNGKKPASLRRDKEKTTAREAKETK
EGSKENQEAQPDPLGEAPRDGGMSKGGQDAKSLKKRSSEGNKRKWVSLPMEDTTRDDEED
DHETPSRGPDATGTPGDTPHPASPNQALRNQRAPDGSRSWRRESRDFVDDSVRSDGVRGG
TRGRGKGRGRGRGRGRGRDENPQSSDARGPTEFGSNMVYYYEGGSKGQMYSVDEKLLKEY
IKRQIEYYFSLHNLERDFFLRRKMDARGFLPVSLIASFHRVQALTTDVGLILEALKSSKE
VELVEDKVRCISDPEHWPIPGGVGYPGMGPSVVGSSVVGSPGVGSPRTDFSQLINCPEFV
PRRALGSDSASSPVRKTPPESDEEPRDSAESGESLATKYAPPSDPEAWIQVEKRHRQPPG
KERGDASPDAGQRPPRPAAPDQEDLDFLFDEEMEQMAPRKNKFTDWSDDGDSDYELDDQD
VNKILIVTQTPPHARKHPAGDRTGNHESRAKLTTDIAKAINDGLFYYEQDLWKEEETTES
AKEGESFKKLNVISRDAFDTLTPKRSKDPQQEELPPAGGEADLYRPLPATVPESPDTHRT
PRNPHTPGRQDATKTPRFYPVMKESSSVDEQTLRKKKTRHSSNPPQEAHIGWVMDSREHR
SRSTSFSSSVSPSEGGAYDCTPRSLPKFWHPSHELLRDNGFTQQGYHKYLWRCLNERKRL
GVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQRALEDAKDNYRYGLECLFRYYSYGLEK
RFRADLFKDFQEETLGDFERGQLYGLEKFWAFLKYSRMKRQPIEPQLQLHLAQFQNLEDF
RVVPPMGEEGGRRRRHSSSAGDEGQRRRHPSNTASKPTQATPTDGTAARGKKVEPAKKES
DNK
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgtccacgcgggtcggctcgtgtctgacagccgaggaggagcgcgaggggcctcgggaa
ccgcagcagcagcagcagccgacggacgggcccggttcctccggagtggagaggagggcg
aggcggagcagcggcggctcgagccccccggaggagggcgacgagccgcgcgacgccgac
ggatcgaaggtcgaggcggcggcggaccgcgtcgtggaggcgccgccacccaaagtcaac
ccgtggaccaagaggacgacgggccggctgccggtcaacaacaacaacaacgtccacaac
aacccgcagggccccccggagaaacatctacagaacactctgaaagtcgttcgtgccaac
aaacccaggatgaggaaatccagcaagtccggtgacttcagtgacatcacaaactggccc
acacctggtgagctggccaaagagcagcaacaaaatgtcctgaacaacaacgggaagaag
ccggcctccttgcgcagagacaaggagaagacgaccgcgagggaagcgaaggagacgaag
gaggggagcaaggagaaccaggaggcgcagcccgacccgctgggggaggcgcccagagac
gggggcatgtccaaggggggacaggacgccaagagcctgaagaagaggagcagcgagggg
aacaaacgtaagtgggtttctctgccgatggaggacaccacccgggacgatgaggaggac
gaccacgagacgcccagccggggtccggacgccacgggaacccccggagacacgccccat
cccgcctcgcccaatcaggcgctccgtaaccagagggcgcctgatggcagcaggagttgg
aggagagagtctcgggactttgtggacgacagcgtgcggagcgacggcgtccgcggggga
acccgaggccgagggaaaggtcgtggccgcgggcgaggtcgtgggcgaggccgcgacgag
aacccccagagctccgacgcccgcggccccacagaattcggcagcaacatggtttactac
tacgagggcggcagcaagggccagatgtactcggtggacgagaagcttctgaaggagtac
atcaagcgccagattgagtactacttcagcctccacaacctggagcgggacttcttcctg
cggaggaagatggacgctcggggcttcctgcccgtgtcgctcatcgccagcttccaccgc
gtccaggcgctcaccacggacgtgggcctcatcctggaggccctgaagagcagcaaggag
gtggagctggtggaggacaaggtccgctgtatcagcgacccggagcactggcccatcccc
ggaggcgtggggtaccccggcatggggccctccgtcgtggggtcctccgtcgtggggtcc
cccggtgttggttccccccggaccgacttctcccagctcatcaactgccccgagttcgtc
ccccggcgggccctcggctcggactctgcttcatcgcccgtgaggaagactccccccgag
tccgatgaagagccccgggactcagctgaatccggggagtccctcgcgaccaaatatgcc
cccccatccgaccccgaggcctggatccaggtggagaaacgccaccggcagccccccgga
aaggagcgcggcgatgcgtctccagacgccggccagcggcctcctcggccggccgcgccc
gaccaggaggacctggacttcctgttcgacgaagagatggagcagatggcgcccaggaag
aacaagttcaccgattggtcggacgacggagactctgactacgagctggatgaccaggac
gtcaacaagatcctcatcgtcacgcagacgccgcctcacgcccgtaaacaccccgcgggg
gaccggacggggaaccacgagtccagagccaagctcaccaccgacatcgccaaggccatc
aacgacgggctgttctactacgagcaggacctgtggaaggaggaggagacgaccgagagc
gccaaggagggcgagagcttcaagaagctgaacgtcatcagtcgggacgcatttgacact
ctgacccccaaacggtccaaagaccctcaacaggaagagctgccgccggcgggcggcgag
gccgacttgtaccgcccgttgccggctacggtcccagagtcgcccgacactcaccggacc
cccaggaacccccacacccccggacgccaggacgccaccaagacgccgagattctacccc
gtcatgaaggagagcagctccgtggacgaacagaccctgagaaagaagaagacccgccac
agttctaacccccctcaggaggcccacatcggctgggtgatggactcccgtgagcaccgg
tcccgctccacctccttcagctccagcgtgtctccatcagagggcggagcttacgactgc
acgccgcgctcgctgcccaagttctggcacccgtcacacgagctgctgagagacaacggg
ttcacccagcaggggtaccacaagtacctgtggcgctgcctcaacgagaggaagcggctg
ggcgtgggtcagtctcaggagatgaacacgctcttcaggttctggtcgttcttcctgaga
gacaacttcaaccgcaagatgtacgaggagttcaagcagcgagcgctggaggacgccaag
gacaactacaggtacggactggaatgcctctttcggtactacagttacgggctggagaag
cggttcagggcggatctgttcaaggacttccaggaggagacgctcggggacttcgagaga
ggtcagctgtacggcctggagaagttctgggccttcctgaagtactccaggatgaagagg
cagcccattgagccccagctgcagttgcacctcgcccagttccagaacctggaggacttc
agggtggtgcccccgatgggcgaggagggcggccggaggaggcgccactcgtcctcggcc
ggggacgaggggcagcgccgccgacacccctccaacaccgcctcgaagcccacgcaggct
acgcccacagacggcaccgccgcccgagggaagaaggtcgagcccgctaagaaggaaagt
gataataaatga

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