Pseudoliparis swirei (Mariana hadal snailfish): 130201007
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Entry
130201007 CDS
T09868
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03030
DNA replication
pswi03410
Base excision repair
pswi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130201007 (pole2)
03410 Base excision repair
130201007 (pole2)
03420 Nucleotide excision repair
130201007 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130201007 (pole2)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130201007 (pole2)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130201007 (pole2)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
130201007 (pole2)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
130201007 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
130201007
NCBI-ProteinID:
XP_056281582
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All DBs
Position
11:complement(23366455..23371838)
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AA seq
528 aa
AA seq
DB search
MDVARQIKTKMSAGFKMRGLILRPEASRHLVEVLESTNASELDDILERVLDAVEKQPLTS
SMVELSVVEIAVQDCTRSCDETIDNVFNIIGAFDVPRYIYSTERKKFVPLAMTSHSAPGL
CGLAKDKAELFRERYTILQQRVHRHQLFTPPAIGAAVDEGQNKFQLKTIEALLGSTSKLG
EVIVLGMVTQLKEGKFYLEDPSGTVQLEMSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTESSSATRAYYGNLNFFGGPSTTSVKASAKLKQLEEENEDAMFVIVSDVWLDNVE
VMEKLNTMFSGYASMPPTSFILCGNFSSAPYGKTQIKSLKDSLKALADAICAYPSIHSSC
RFVFVPGPEDPGPGNILPRPPLADHITEEFRQRVPFSVFTTNPCRIQYCSQEIVIIREDL
VNKMCRNCIRLPNNNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVII
FADKYDPFSIKNTDCLCVNPGSFPKSGFTFKVYYPSSRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgctcgccaaataaagacaaagatgtccgctggcttcaagatgcggggcctc
atcctgcgacctgaggccagcagacacctggtggaggtcctggagtcgaccaatgcctct
gaactggatgatattcttgagcgcgtgttggacgcagtggagaagcagccattgacctcc
agtatggtggagctgtccgtggtggagattgcagttcaggattgtactcgctcttgtgat
gaaaccatagataatgtgtttaacattattggagccttcgatgtgcccagatacatttac
agcacggagcggaagaaatttgtcccccttgccatgacgagccattcggcacccggtctg
tgtggtttggccaaagacaaagctgaactcttcagggagcgctacaccatcttacaacag
cgggtccatcggcaccagctcttcaccccacctgcaataggagctgctgttgacgagggc
caaaacaaatttcagctcaagacaattgaagcgctgcttggtagcacctctaaactggga
gaagtgattgtcctggggatggtcacccagctgaaagagggtaaattttacctggaggac
ccaagtggaacagtccagcttgaaatgtccaaagcacagtttcataatggcctgtacaca
gaatcctgctttgtgctggcagagggttggtacgaggactctgttttccacgttaatggc
ttcggctttcccccgacggagtcgtcatctgccacgagggcttactacggcaatctgaac
ttcttcggtggtccgtccaccacttcggtgaaagcatcagccaagctgaagcagctggag
gaggagaatgaagatgccatgttcgtaattgtctctgatgtttggctggacaacgttgaa
gtgatggagaagctcaacacaatgttctcaggctatgcttcgatgcctcctaccagtttc
attttgtgtggaaacttttcttctgctccgtatggaaaaacacagatcaaatcactcaaa
gactcactgaaggctcttgctgatgctatatgtgcgtaccccagcattcacagcagctgt
cgctttgtgtttgttcctggccctgaggacccgggtccaggcaacatcctgccacggccc
cctttggcagatcacatcacagaggagttcaggcagagggtgccattttcggtgtttact
actaacccatgcaggatccagtactgcagccaagagattgtcatcatcagggaagacctg
gtcaacaagatgtgcaggaactgcatccggttgcccaataacaatcttgacattccaaac
cattttgtgaagaccatcttatcccagggtcacttgactccactccctctgtatgtgagt
cctgtattctgggcgtacgactactccctgcgtgtctacccagtccctgatgtcatcatc
tttgcagacaaatacgacccattcagcattaaaaacacagactgcctctgtgtcaacccg
ggctcattccccaaaagtggcttcacatttaaggtgtattacccatccagcagaactgtt
gaagacagcaaacttcaaggactctaa
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