Pseudoliparis swirei (Mariana hadal snailfish): 130201027
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Entry
130201027 CDS
T09868
Symbol
hivep2b
Name
(RefSeq) transcription factor HIVEP2
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130201027 (hivep2b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130201027 (hivep2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_16
TFIIIA_zf-C2H2
zf-C2H2_2
zf-C2H2_ZN142
zf-H2C2_5
SF3a60_Prp9_C
Motif
Other DBs
NCBI-GeneID:
130201027
NCBI-ProteinID:
XP_056281637
LinkDB
All DBs
Position
11:20046685..20060804
Genome browser
AA seq
1756 aa
AA seq
DB search
MESLETTAGAESPTEGQDGRVGAHTKCTSEAAARTRGPSVELEGEGRRQRPREGQSRDAR
GFQEMSDSGKSLQLEDQQSRTQSAGRQDHEESSYPAKGFPIGRQRSAESPGPASRMKSAG
PPEVQQQCSHPGMDQLCDAACKVEQKAAQKPGKYVCDYCGRGCAKPSVLKKHIRSHTGER
PYPCVLCGFSFKTKSNLYKHRKSHAHLVKAGTATLSELGSYNADQGSFEGDGEFFSDGEQ
STDTDEDALSDPLLLLDSPAEGSDNTAIKVLNLIAQRKGVASISPQDGSSQPQEINAPAT
AGEAGRAIQSCAIKQRLALRLSEKRSSDSERNLSLPSQSSKGSTDSGYFSRSESAEHQTG
SPNTNAKSYQEIMFGKCYRPSPKQTADMLACSTDSDEYTGRRSERGVSRVFTQEKDFVEP
IKINTKSSAREEEKEAQLDGGPDGGTLTRSNSMPTSPAVCLAMPQALRGSHSFDERTNTG
GTRRLRRQAAFEHSAHDGHADADGHGKASEGGTSPAGSEMENHPSVASSVSHQRHAMELA
TRKRRKEKREEEDLPGQYEGRREQCEDMFDSNSDYDSKEAAVSLMALGKGYSSSMLTQMD
WCDMEVSVSPEMSARKTLGNVISVIQHTNSINRSHSEQSDSFKYHGQRQSSMPSSQAMEA
SESYELERSDCMLRQSFQMGPKLVRQPNIQVPEIRVTVEPDSPEKAPEVQAKEAEKHVEE
FQWPQRSETLAQFPPEKLPPKKKRLRLCDIEHSSGESSFESACTSLSRSPSQDSNLSYSS
AFSFDREESLKSVSPARQDEFGKPLELLAVPGSGHSLSVLNQRQQHEMRRSASEQAPCNL
RKEFPEARSISFDYGSLSPASKGRPVDVGLSAVKEIRRGNLVRQESLNMDTEVFPQHRSS
SSPPFMAVAALPRTLPIFSTGNTFPQLSHPSLSVPVRMQTHVPSHGSITYTSVSQIFDNQ
YDVVSSATSSSQSQISRLSGNLDSHDASAYTGPPSTHRLNVEAPDLSSAKLQTGIPLSLT
SRTISTTNASSGGANKRMLSPASSMELFMEVKQQKRVKEERMFGQIVEELSAVELGEEKG
LISEMLGDSRMSPFIAQKEDSDHGVESAMESSSASYSTISASEGKEVGAGKRVQMDTVAQ
LVASRELLISDTENSRLFPSLRTTTGVSWCYLNRTKPSCSHSNAPFSSVYTAWCVSSHNP
NPLELSTSSALALLRSKQRGDKVIYTVAAMCQPGAGKLVSSLILWRQTMEQRKPEPKEVD
IAYGKKVKDIGCRVRSAKEEWKEREASTIQTVPTRIKIFDGGYKSNEDYVYVRGRGRGKY
ICEECGIRCKKPSMLKKHIRTHTDVRPYVCRVCNFAFKTKGNLTKHMKSKAHMKKCLELG
VSVTMDDTEIQEHVDDSQQDSKTDPVNAAKHQFSDAEDSDGMDEDVDEIDEDDDEDDEYE
GDSTPKLRSRSTSPQPCGVTSLAVTATAALHVYSLTSLPGGRSGSDHRPAFDQREKSLDE
DSLTMLSPDHAGFLFDPYSSCLLSPGWESPIREPSPSRRRYPSPRRELSPRGRSSPRWDA
SPRRAGSPGFTPVRRPVSPGTELASIRGRQRVVLRAVSPRRGSHQHKGGGEKTRHLAQME
MAQHGAFEMEMDRRSSSAPGPPGSLPQNILSHLPLHSQQPARSLLPVLPVGGLQMSPHSP
PSSGTDVTFPSAPSPQSSEGRRCCSSREGSVHGPESGGEDAGRSLDPDAGDGAQEEIVQT
CLKAIASLKITTEDPH
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccttgaaactactgcgggggcggagagccccactgagggtcaggacggacgt
gtcggtgcgcacacaaaatgcacctcggaggcggcagcgcggacgaggggtccatcggtc
gaattggaaggcgaggggcggcgccagcgaccgcgagaaggtcagagccgagacgcgcgt
ggtttccaagagatgtctgactcggggaaatcactgcaattagaagatcagcagtcccga
actcagtccgccggccgtcaagaccacgaggagtcttcgtatccagcgaaggggtttccc
atcggcagacagagatctgcagagtcccctggacccgcgtctcgcatgaagtccgccggc
ccacccgaagtccaacagcagtgttcccatccggggatggatcagctgtgtgacgccgcg
tgtaaagtggagcagaaagcggcgcaaaagcccgggaagtatgtttgcgattactgcgga
agggggtgcgccaaacccagcgtgctcaagaaacacattcgctcgcacaccggcgagcgg
ccctatccgtgcgtcctgtgcggcttctccttcaagacgaagagcaatctgtacaaacac
cggaagtcccacgctcacttggtcaaagcgggaacggcgacgctctccgaactcggttct
tacaacgccgaccaggggtcttttgaaggggacggagagtttttctccgacggcgagcaa
agcacggacacggacgaggacgcgctcagcgacccgctgctgctgctggactctccggcg
gaggggtcggataacaccgccataaaagtactgaatctcatcgctcagagaaagggagtc
gcgtcgatctcgcctcaggacggctcatcccagccccaagaaatcaatgcgcccgccacc
gccggcgaggccggccgcgcaattcaatcgtgcgccatcaaacagaggctcgcacttcgg
ctgtccgagaagcgaagcagcgactcggaacgcaatctgtccctcccgagtcagtccagc
aagggcagcacggactccggctacttctcgcgctccgagagcgccgagcaccagaccggc
tctccgaacaccaacgcaaagtcctatcaagaaattatgttcggcaagtgttacaggccg
agcccgaaacagacggcggacatgttggcttgcagcacagactcggacgagtacacgggg
agacgctccgagaggggagtctcccgcgtgttcacccaggaaaaagacttcgtcgagccc
atcaaaataaacacaaagtcgtcggcgagggaggaggagaaagaagcgcagttagacggc
ggccccgatggggggaccctgacgaggagcaactcgatgccgacgtccccggcggtgtgt
ctggctatgcctcaggccctcagaggcagccactcgttcgacgagaggacgaacaccggc
ggcacgaggaggctcaggcggcaagctgctttcgaacactcggcgcacgacggccacgcg
gacgccgacggccacggaaaggcgagcgagggcggcacctcgcccgcgggatccgagatg
gaaaaccacccctccgtggcctccagcgtgagccatcagagacacgcgatggaactggca
acgcggaagcgtcggaaagagaagcgggaagaggaggatttgccaggtcaatacgaaggc
cgtcgcgaacagtgcgaggacatgtttgactcgaatagcgactacgattcaaaagaagct
gccgtgagcctcatggcattaggaaaagggtattcttcaagtatgctcacgcagatggac
tggtgtgacatggaggtgtcggtgagccctgaaatgtccgcgaggaaaactttagggaat
gtcatttctgtgatccagcacacaaactcgataaacaggtctcactccgaacagtccgac
tccttcaagtaccatgggcagagacagagcagcatgccttcgtcacaagcgatggaggcg
agtgaatcttatgagttggaaaggagcgactgcatgctgaggcaatcatttcaaatgggc
cccaaacttgtgcgtcagcccaacatacaagtcccagaaatccgtgtcacggtagagccc
gacagtccggaaaaggccccggaggtgcaggcgaaggaggcagagaagcacgtggaggag
ttccagtggcctcagaggagtgaaacgttagcacagttccctccagaaaagctccctccg
aagaagaaacggctacgcctgtgcgacatcgagcactcctccggcgaatccagtttcgag
tctgcctgcacgagtctctcccgcagcccgagccaggacagcaacctatcttacagctcc
gccttctccttcgacagggaggagagtttgaagtcggtctctccggccaggcaggacgaa
tttggcaaaccgctggagctcttagcggtgccagggagtggccactccctctccgtgctc
aaccagcggcaacaacacgaaatgagacgctccgcctcggagcaggcgccgtgcaacttg
cgcaaagagttcccggaggcgcgcagcatatcgttcgactacggcagcctttctccggcg
agcaaaggtcgaccggtggacgtcggcctctcggctgtgaaggagatccggcgggggaac
ttggtgcggcaggagtcgttgaatatggacactgaggtgttcccgcagcatcgcagcagc
tcctcccctccattcatggcagttgccgctctgccgcggactttgccgatattctccacg
gggaataccttcccccagctgtcgcatccaagcctttcagtccccgttcggatgcagacc
cacgtgccgtcccacggcagtatcacatacacatcagtatcgcagatcttcgacaatcag
tacgacgtcgtgagctccgctacgtcctcctctcagagtcagatttcccgtttgtcggga
aatctcgattctcacgacgcgtcggcgtacaccggaccgccttcgacgcacaggctcaac
gtcgaagcccccgatttgtcatcggcgaagctccagacgggcatccccctctccctgacc
tccagaaccatctcgaccacgaacgcctccagcggcggcgccaacaagcggatgctgtcc
cccgccagcagcatggagctcttcatggaggtcaagcagcaaaaacgggtgaaagaggaa
aggatgttcgggcagatcgtggaggagctgagtgccgtggagttgggcgaagagaagggc
ctcatttccgagatgctgggtgactcgcgtatgagtccgtttatcgcacagaaagaggac
agtgaccacggcgttgagtcggccatggaaagcagctccgcttcctactccacgatatca
gccagcgaagggaaagaagttggcgcggggaaacgggtgcagatggacacggtggcgcag
ctggtcgccagtcgagaactcctgatctcagacacggagaattcaagactgtttccaagc
ctacgcacgacgacgggggtgagctggtgttatctcaaccgcaccaagccgagctgctct
cacagcaacgcccctttctcctccgtgtacaccgcctggtgtgtgagctcccacaacccc
aaccctctggagctgagcaccagcagcgctctggctctgctgcggtccaaacagaggggc
gacaaggtcatatacaccgtggcggccatgtgtcagcccggcgcggggaaactggtgtca
tccctcatcctgtggaggcagaccatggaacagaggaaaccggagcccaaagaggtggac
atcgcctacgggaagaaggtgaaagacatcggctgcagagtgagaagcgccaaggaggag
tggaaggagagggaggcgtccacaatccaaacagtgccaacgcgcattaagatcttcgat
ggagggtacaagtccaatgaagactacgtgtatgtcagaggtcgaggccgggggaaatac
atttgtgaggagtgtggcattcgctgtaagaagccgagcatgctgaaaaaacacatcagg
acccacacggacgtgaggccgtacgtctgcagggtctgcaactttgcttttaaaacgaaa
ggaaacctgacgaaacatatgaagtcaaaggcacacatgaagaaatgtcttgagctcggg
gtgtcggtgacgatggatgacacggagatacaggaacacgtggacgacagccaacaagat
tccaagacggatccggtcaacgcagccaaacaccagttctccgacgccgaggactctgac
ggaatggacgaagacgtcgacgaaatcgacgaagacgacgacgaggacgacgaatacgag
ggcgactccactcccaagttgcgttccagaagcacgagcccccagccgtgcggcgtgacc
tccctggcggtcacggccaccgccgctctccacgtctactccctcacctctctgcccggc
gggcggagcggctcggatcatcgacccgccttcgaccagcgggagaagtccctggacgaa
gactctctgaccatgctgtctccggaccacgccggcttcctcttcgacccgtactcgtcg
tgcctgctctctcccggttgggagtctcccatcagggagccctccccttcgcgccggcgt
tacccgtccccgcggcgagagctctccccgcgaggccgctcctctcccaggtgggacgcc
tccccgcggagagccggctcgcccggcttcacgcccgttcggcgacccgtgtctcccggg
acggagctggcctcgatcagaggccggcagagagtcgtgctgagggcggtgtctccgcgg
agaggctcgcaccagcacaaaggcggcggcgagaaaacccgacacctggcgcagatggag
atggctcaacacggagcctttgaaatggagatggatcggaggagcagctcggctcccggc
ccgcccggctcgctcccccagaacatcctcagccacctccctcttcactcccagcagccg
gcccgcagtttgctccccgtccttccggtcggagggctccagatgtcgccgcactctccg
ccttcctccggcaccgatgtcacctttccctcggcgccgagcccccagagcagcgagggc
cggcgctgctgcagcagcagggagggatcggtccatgggcccgagtccgggggggaggac
gccgggagaagcctcgaccccgacgccggggacggcgcgcaggaggagatcgtccagacc
tgcttgaaagccatcgcctcattgaagatcaccacagaggaccctcactga
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