Pseudoliparis swirei (Mariana hadal snailfish): 130201032
Help
Entry
130201032 CDS
T09868
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130201032 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130201032 (stag1a)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130201032 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
130201032
NCBI-ProteinID:
XP_056281649
LinkDB
All DBs
Position
11:complement(19570039..19610159)
Genome browser
AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGPTDAVALSMSIGEIEDPEVKGKKKRGRPGKQTPAANKKPRKTP
AEKAVGVARGRGKANGVAQHNGDGGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYN
FCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIPGKRANDKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRVVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPLAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLTEEAVQGEEVLSDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMTLPMLLSKYQADSEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIEMDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEGLLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSVLWQLVKITEGAPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLVSGGRDGLQPLVFNPDMTLQNELLNFVLDHV
FIDQDDESQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIFDIVDMHAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKNGIEFAFKFQNPRGPEFPPLNLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLQTGGDEDHMSVTSGSSSKAGSVRSK
KARPPVHKKRIEEESSVEGSWMLRNDTLQTPGALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDFVHNPQMQMSWLGQQKMEEVNRKDRTGMNYIKARSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagcttcctgtcctacaggactcttccaatgagtctgggccgaccgac
gccgtggcgttaagcatgagcatcggggagatcgaagatcccgaggtgaaaggcaagaag
aagagagggaggcctggaaaacaaaccccggcggcgaataagaagccgaggaagacgccg
gcggagaaggccgtgggcgtcgcgagagggcgtgggaaggccaacggcgtggctcagcat
aacggcgacggcggagatcccgtcacgctgtttgaggtcgtcaaactgggcaagagtgcc
atgcagtctgtggtggacgagtggatcgagtcgtacaaacaggacagagacttggcgctg
ctggatctcatcaattttttcatccagtgctcggggtgcaaagggaccgtgaggatcgag
atgttcaggaacatgcagaacgcagagatcatccgcaagatgacggaagagtttgacgag
gacagcggggactaccccctcaccatgccggggcccctgtggaagaagttccgctacaac
ttctgcgagttcatcagcgtcctgatccgccagtgtcagtacagcatcatctacgacgag
tacatgatggacacggtgatctccctcctcaccgggctgtcggactcccaggtgcgagcc
ttcagacacacctccacgctggcagcgatgaagctgatgacggcgctggtgaacgtggcg
ctgaacctgagcatccaccaggataacacgcagcggcagtacgaagccgagaggaacaag
atccccggcaagcgcgccaacgacaagctggagctgctgctgcagaagaggaaggagctt
caagaaaaccaagatgaaatcgagaatatgatgaactccatcttcaagggaatcttcgtg
catcgctacagggacgccattgctgagatccgagccatctgcatcgaggagatcggcgtg
tggatgaagatgtacagcgacgcttttctcaatgacagctacctgaaatatgtcggatgg
acgctacacgatcggcaaggagaggtgcgcctcaagtgcctgaaggctctgcagaacttg
tacacaaaccgagagctgttccccaagttggagctgttcacgaaccgcttcaaggaccgc
gttgtgtcgatgacgctggataaggagtacgacgtggctgtggaggccatccggctggtc
acgctcattctgcagggcagtgaagacgccttatccaatgaggactgtgagaacgtgtac
cacctggtctactccgcccaccgaccggtggccgttgccgccggagagttcctgcacagg
aaacttttcagccgtcatgacccactggcagaagaggcgctggcgaagcgccgagggcgg
agcagccccaacgggaatctcatccgcatgctggtcctcttctttctggagagcgagctc
catgagcatgcggcctacctggtggactcgttgtgggaaagctctcaggagctgctgaag
gactgggagtgtatgacggaacttctgacggaggaggccgtgcagggcgaggaggtgttg
tcagatagacaggagagtgctctcatagagctgatggtgtgcaccatccggcaggcagca
gaggctcacccacctgttggcagaggcaccggcaaaagggtgctgacggcgaaggagagg
aagacccagatcgacgacaagaacaaactgacggagcacttcatcatgactctgcccatg
cttctgtccaagtaccaggcggattcggagaaggtggccaacttgctccagatccctcag
ttcttcgacctggacgtgtacagcgccgggcgcatggagaagcacctggacgccctgctg
aagcagatccggctggtggtggagaagcacatcgagatggacgtgctggaggcctgcagc
aagacctacagcatcctctgctccgaggagtacaccatcatgaaccgcgtggacattgcc
cgctcgcagctcatcgacgagatgacggaccgcttcgcgcactccgtcgaggggctgctt
caggaggcggaggaggccgatgacgacgacatctacaacgttttatccacgctcaaaaga
ctcaccgccttccacaatgcgcacgacttgacgcggtgggatttattcgggaactgctac
cggctgctgaaggcgggcatcgagcagggctccatgccggagcagatcgccgtccaggcc
ctgcagtgctcccactactcggtcctctggcagctggtcaagatcaccgagggggctccc
agcaaggatgacctggtggctctgaggagagtggtgaagtcgttcttggctgtctgccag
cagtgcctgtctaacgtcaacacgccagtcaaagaacaggccttcatgctcctctgcgac
ctgctgatgatcttcagccaccagctggtgtccggcggccgggacggcctccagccgctc
gtcttcaacccggacatgactctgcagaacgagctgctcaacttcgtcctggaccacgtc
ttcatcgaccaggacgacgagagccagagcatggagggagacgaggaagacgaggccaac
aagatcgaggctctccacaaaaggagaaacctgctcgcggctttctgcaaactcatcatc
ttcgacatcgtggacatgcatgctgcggccgacatcttcaaacactacatgaagtattat
aacgattacggcgacatcatcaaggagactctgagtaaaaccagacagacggacaagatc
ctctgtgccaagacgctcatcctcagtctgcagcagctgttcaacgagctgctgcaggac
cagggccccaacctggaccgcacgtcgtctcacgtcagcggcatcaaggagctggcccgc
cgcttcgccctcaccttcggcctggaccagatcaagaccagagaggccgtcgccacgctg
cacaagaatggaatcgagtttgcctttaagttccagaatcctcgaggaccagagtttcct
cccctcaacttagccttccttgaggttctgagtgaattctcttcaaaactaatccgtcaa
gacaaaaaaactgtccactcgtacctggagaagttcatgtcggagtctatgtcggagcgc
cgggaggacgtgtggctgccgctgatctcctacaggaacagcctgcagacgggcggagac
gaggaccacatgtcggtgacgtcgggctccagcagcaaggccggctcggtgcgcagcaag
aaggcccggccgccggtccacaagaagcgaatcgaggaagagagcagcgttgagggctcg
tggatgttgcgcaacgacaccctccagacaccgggagccctgcagacgcctcagctcacc
tcgacggtcctcagagagaaccggcccgcggaacacatgcccgacccggactcggaaccc
ggatcagagaacgactttgtgcacaatcctcagatgcagatgtcgtggctcgggcagcag
aagatggaggaggtgaacaggaaggaccggacaggcatgaactacatcaaggcgcgcagc
aaccagggcgtccggcagacggtgcgtgggttgatggaggatgacgcagagcccatcttt
gaggacgtgatgatgtcatcgcggggacagttggaggacatgaacgaggagtttgaagac
acgatggtgatcgacctgccgccgtcgaggaacagacgggaacgagcagagttgagaccg
gacttctttgactccgcagcgatgattgaggacgagtcggggttcagcatgcccatgttc
tga
DBGET
integrated database retrieval system
