Pseudoliparis swirei (Mariana hadal snailfish): 130201033
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Entry
130201033 CDS
T09868
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201033 (stxbp5b)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130201033 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130201033 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
130201033
NCBI-ProteinID:
XP_056281651
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All DBs
Position
11:19806665..19837642
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AA seq
1236 aa
AA seq
DB search
MVVFSQPFVPGVKMKKFNIRKVLDGLTAASSSSSSSATAQPGSSRENDVIQETLQSDHFQ
LCKTVRHGFPYQPSSMAFDPVQKILAVGTQTGALRLFGCAGVECYCQHESGAAVIQLQFL
INEGALVSALADDSIHLWNLRQKTPAILHSLKFSRERITYCHLPFQSKWLYVGTERGNIH
IVNVESFTLSGYVIMWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGYECGVVVLWDLKC
KKADCRYNYDEAIHSIAWHHEGKQFVCSHSDGSLTTWNIRIPAKSVQIITPHGKQPKDGK
KPEPCKPILKVEYKTTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTTVLEMDYPIVDF
LTLCETPYPNDFQEPYAVVILLEKDLVLIDLGQIGYPIFENPYPLTIHESPVTCCEYFVD
CPAELIPALYSVGSRQKRQSYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASA
LMLQVLYKLKTAKVFERARGKEEKANTEIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIV
YRFSKQEVTTVVVQLLEVRMQCELNGGDSPDPGGEQTPTLPPPGGASSSPQDSEPPAQPS
TGSGNNSSDGPKDNIPCLQVRSAPLKQSPGYQVELVIQLVWVSGEPPQPITSLAFNSSYG
LVVFGNSNGLAVVDYLQKALLLHMGTSELYSPAEPYQRQPRSPRKVRQPSGDIPTGKSCM
SRLSNMYSESVKKLLSSHFTTCDSNDGSNTTEDRCKSPTSGSTSPCNSDDERKQKFIEKV
KLKSRRFSKTVANDFAKMSRKINSSSEQKTDLAKERSKQWRSVTCKKQICCASDGKAAGT
ATTQKGAVCRTASTPNLHARDNSFTRSRSSSVTSIDRESREAISSFHFCESYPRKNDVAV
GPCVLVGTTQGTVLMVALSLPPGGDQRLQQPVGISPCGSMVTLKGGILTMALLDATGALL
PPAYEPWYDPNASDEEKEKSRRRRPASPPSSQDGPDPQFAVLCSEKQAKVVAMPSQTRIY
KHNITETSFVLRADVVQMGGAYCIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIART
FCFSNLGQALYLTSPTEIQRITYSQETCDNRQEMLSELFTPVETPEAPNRGFFKGLFGGG
AQSLDREDLFGETGAGKASRSLAQHIPGQGGMEGMKGAASGVVGDLARARIALDERGQKL
GELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttttctcgcaaccgtttgtacccggagtcaaaatgaagaagttcaacattagg
aaggtgctggacggcttgacagcggcttcttcttcctcctcttcctccgcgaccgcccag
ccgggctccagccgggagaacgacgtgatccaggagaccctccagtcggaccatttccag
ctttgcaagactgtgcgtcatggcttcccatatcaaccatcctccatggcttttgacccc
gtgcagaaaatcctggccgtcgggactcagaccggagcgctgaggctcttcggctgtgcg
ggtgtggagtgctactgtcagcatgagagcggcgccgccgtcatccagctgcagttcctg
atcaacgagggggcgctggtgagtgccttagccgatgacagcatccacctgtggaacctg
aggcagaagacccctgcgatcctgcattctctcaagttcagcagggagaggatcacatac
tgccacctgcccttccagagcaaatggctctacgtcggcaccgagagaggaaacatccac
attgtcaacgtggagtccttcaccctctcgggctacgtcatcatgtggaacaaagccatc
gaactatccacgaagacacacccgggtcctgtcgtgcacatcagtgacaaccccatggat
gaaggaaagctcctgattggatacgagtgtggggtcgtggtgttgtgggacttgaagtgc
aaaaaagctgactgccgctacaattatgatgaggcgatccactcgatagcctggcaccac
gagggcaaacagtttgtctgcagccactccgacggctctctgaccacctggaatatacga
atcccagccaagtctgtacagatcatcacacctcatggaaagcagcccaaggatggaaaa
aagcccgagccatgcaagcctatcctgaaggtggagtacaaaacaacaagggctggggac
ccgttcatggtcctgtctggaggtctgtcttacgacacggtggggaggagagcctgtctg
actgtgatgcacggaaagagcaccacggtcctggagatggactaccccatcgtcgatttt
ctaacgctgtgcgagactccgtatccaaacgactttcaggagccgtatgccgtggtgatc
ctcctcgagaaggatttagtgttaatagacctcggccagattgggtacccgatatttgag
aatccatatcctctgactatccacgagtcaccggtgacctgctgtgaatactttgtggac
tgccctgcggaactcattcctgcgctttactctgtgggcagccggcaaaagagacaaagc
tacagcaagaaggaatggcccattagtggaggaaactggggccaaggcactcagagttac
ccagagattattatcactggacatgctgacgggtcgatcaaattctgggacgcttctgca
ttaatgcttcaagtgctgtacaagctcaagactgccaaggtttttgagcgggctcgcggt
aaggaggagaaggccaacaccgagatagtcgaggaggaccccttcgccatccagaccttg
tcctggtgccctgagagcaggatgctgtgcgtggccggggtgtccgcccacgtcatcgtc
tatcgcttcagcaaacaggaagtcacgactgtagttgtgcagcttttggaggtgcggatg
cagtgcgagcttaacggcggggactcccctgatccaggaggggagcagacccccaccctg
ccccccccggggggagcttcctccagcccgcaggacagcgagcctcccgctcagccgtcc
acgggcagcggcaacaactcctccgacggacccaaggacaacataccatgcctgcaggtg
cgcagcgccccgctgaagcagtctccgggctaccaggtggagctggtgatccagctggtg
tgggtgagcggggagcctcctcagccaatcaccagcctggctttcaactcctcctacggc
ctcgtggtgtttggcaacagtaacggtctggctgtggtcgactacctccagaaagctctg
ctcctccacatgggcacgtcggagctgtacagcccggccgagccctaccagaggcagccg
cgctccccacgcaaagtgcgacagccgtctggagacattccaactggcaagtcttgcatg
tccagactttctaacatgtattctgagtctgtgaaaaaactcctttcatcacacttcaca
acctgtgactcaaacgacgggtccaacaccacagaggaccgctgcaaatccccgacttca
ggatctacctcaccttgcaattctgacgatgagagaaaacagaagttcatagagaaggtg
aagttaaaaagcagacgcttttccaagacggttgccaatgactttgccaagatgtcacgg
aaaattaactcgtctagcgagcaaaagactgacctggcaaaggagcggtccaaacaatgg
cgctctgtcacatgtaagaagcagatttgttgtgcgagcgacggcaaggcggcaggcaca
gcgacgacccagaagggggccgtctgtagaacggcgtcaacccccaacttgcatgcccgg
gataactcgttcactcgctcgcgtagttcaagtgtcaccagcatagaccgagagtctcga
gaggccatctcctcctttcacttctgcgagagttaccccaggaagaacgacgtcgcagtc
ggcccctgtgtgctggtcgggaccacccagggcacggtgctgatggtggccctcagcctg
ccgcccggcggggaccagaggctgcagcaaccagtcggcatctccccctgtggcagtatg
gtcacactcaaaggaggcattctgacgatggccctgctggacgccactggagctctgctg
ccccctgcctacgagccgtggtatgacccaaacgcctcggacgaggagaaggagaagagc
cggaggcgcaggccggcctcccctccctcgtctcaagacggtccggacccccagttcgcc
gtgctgtgttcggagaaacaggccaaggtggtggccatgccctcccaaacgcgcatctac
aaacacaacatcacggagacctccttcgtgctcagggcggacgttgtgcagatgggcgga
gcctactgcatcgcctgtttctgcgccaacgggcatatcatgactctgagtctgcccagt
ctgcggcctctgctggacgtgaactacctgccgctgacggacatgcggatagccagaacg
ttctgcttctccaacctgggtcaggccctgtacctcacctcccccacggagatccagagg
atcacctacagccaggagacctgcgacaatcggcaggagatgctcagtgagttatttacc
cccgtggagacgccagaggctcccaacagagggttcttcaaaggcctgtttgggggagga
gctcagtcactggacagggaggacctctttggagagacgggtgctggcaaggcctcccgc
agcctggcccagcacatcccgggccaagggggcatggagggcatgaagggcgccgcgtcc
ggggtggtgggggatctggcccgcgcgcggatagctctggacgagagggggcagaaactg
ggggagctggaggacagaacggccgccatgatggccagcgccgattcattttcaaaacac
gctcatgacatgatgctgaagtacaaagacaagaagtggtaccagctctga
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