Pseudoliparis swirei (Mariana hadal snailfish): 130201040
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Entry
130201040 CDS
T09868
Symbol
fbxo30a
Name
(RefSeq) F-box only protein 30a
KO
K10307
F-box protein 30
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130201040 (fbxo30a)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130201040 (fbxo30a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
130201040
NCBI-ProteinID:
XP_056281670
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Position
11:complement(19737777..19743764)
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AA seq
713 aa
AA seq
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MEGLHSHCLKCINRRCMVRPETGVCCNLTCCPLVCGAVFHSCKLEEHRLLCRYERLPCLN
RGFGCPFTIARIRMAKHLATCPASIVCCTMEWNRWPVSYSDRKSYENLSKDVDEVEQLDM
ALALQDQRMLLESLKVTTTVSKNGDEEAHERDKRATASSLPEAATVEMEEEPYGGSCRAS
AETGRSLAAALDILSNGTDIDVIVGNPNGEKTGKSGALGDGRRGYVAEGVKNVDMRESDS
DSECELGAVGGAGRGADREDEVEEEESIAAEEPVDSDLFWPEAPRGYAPVVALEPPAPQP
APVSRPMPFVLSKHVTNNFLQQLPTELRFRCLERKLQNVEVLRGISMFTFNGRRALLSDP
YWFRAKMEDKSVDTSDLEVADDPMGLNGIDLITAALLFCLGDSPGGRGISDSRFVDGYHI
DFGTQTFSFPSAILATNTTVGDIASASACDHASPQLSNPSPFHTLRLDLVLECVARYQTK
QRSMFTFVCGQLFRRDEFSSHFKNVHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSVQ
GFRVIHDRHLGSFGVRPGLPAQPGEHPPRKPRRFGPRRDLFSGLPFEVLQHVATFLDGFS
LCQLSRASHAMRDVCASLLQMRGMVVLLWEKTRRADGSSSWQITNKVWRFSTAFGTVNEW
KFANIASMADHLKKCQFNTITRREEAIPLPCMCFTRELTKEGRCLRSVLKPVA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagggcctgcactcccactgcctgaaatgcatcaacaggagatgcatggtgagaccg
gagacgggcgtctgctgcaacctcacctgctgccccctcgtctgcggcgccgttttccac
tcgtgcaaactggaggagcaccgcctgctgtgtcgatacgagcggctgccgtgcctcaac
agaggcttcggctgcccgttcaccatcgccaggatcaggatggccaaacacctcgccacg
tgcccggccagcatcgtgtgttgcaccatggagtggaaccgctggcccgtgagctactcc
gaccgcaagtcctacgagaacttgagcaaagacgtcgacgaggtggagcagctcgacatg
gccttggcgctgcaggaccagaggatgctgttggagtccctgaaggtcacgaccaccgtg
tcgaagaacggagacgaggaagcccacgaaagggacaaaagggccacggcgtccagtctg
ccggaggcggcgacggtggaaatggaagaggagccgtacggcgggtcgtgtcgagcctcg
gcggagacgggccgaagtttagcggcggccttggacatcctcagcaacggcacggatatc
gacgtgatcgtcgggaatccgaacggcgaaaagaccggtaagagcggagcgctcggagac
ggtcgtcgcggttacgtcgcggagggcgtgaagaacgtcgatatgcgggagagcgactcc
gattcggagtgcgagctcggcgcggtgggcggagcgggccgcggcgccgacagggaagac
gaggtcgaagaggaggaaagcatcgccgcggaggagccggtcgactccgacctcttctgg
cccgaggcgcctcggggctacgcgccggttgtcgccctggaacctccggcgccacaaccg
gcgccggtttcacgcccgatgccgttcgtgctgtcgaaacacgtgacgaataacttcctg
cagcagctgcccactgagctccggttcaggtgtttggagcgtaaactccagaatgtagaa
gtgctcagaggaatcagcatgttcacgttcaacgggcgccgggctctgctgtccgacccg
tactggtttcgggcgaagatggaggacaagtcggtggacacgtcggacctggaagtggcg
gacgacccgatgggcctcaacggcatcgatctcatcaccgcggcgttgctcttctgcctc
ggcgactctccgggcggccgaggcatctccgacagccgcttcgtggacggctaccacatc
gacttcgggacgcagacgttctccttcccgtcggccatcctcgcgaccaacacgacggtg
ggcgacatcgcgtcggcctcggcctgcgaccacgccagcccgcagctctccaacccgagc
cccttccacacgctcaggctggacctggtgctcgagtgcgtcgcccggtaccagacgaag
cagcgctccatgttcacgttcgtgtgcggccagctgttccggcgcgacgagttctcgtcc
catttcaaaaacgtccacggggacatccacgccgggctcaacggctggatggagcagcgc
tgccccttggcctactacggctgcacctactcccaacggcggttctgcccgtccgtccag
ggcttcagggtcatccacgacaggcacctcggctcgttcggggtccggccgggtctgccc
gcgcaacccggggaacatcccccgaggaaaccccgccgcttcggaccccgccgcgatctg
ttcagcggtctgccgttcgaggtgctgcagcacgtggcgaccttcctggacggcttcagc
ctgtgccaactgtccagagcgtcccacgccatgagggacgtgtgcgccagtctgctccag
atgcgcggcatggtcgtcctcctctgggagaagacgcggcgtgccgacgggtcgtcctcg
tggcagatcaccaacaaggtgtggcgattcagcaccgccttcggtaccgtgaacgagtgg
aagttcgccaacatcgccagcatggccgaccacctcaagaagtgccagttcaacacgatc
actcgccgggaggaggcgatccctctgccctgcatgtgcttcaccagagagctcacgaag
gagggcaggtgtttacgctccgtcctcaaaccggtggcataa
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