Pseudoliparis swirei (Mariana hadal snailfish): 130201071
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Entry
130201071 CDS
T09868
Symbol
vsnl1b
Name
(RefSeq) visinin-like protein 1b
KO
K19936
visinin-like protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201071 (vsnl1b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130201071 (vsnl1b)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130201071 (vsnl1b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
EF-hand domain-containing proteins
Calcium binding proteins
130201071 (vsnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
Dockerin_1
SPARC_Ca_bdg
Caleosin
WEF-hand
IL3
p25-alpha
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
130201071
NCBI-ProteinID:
XP_056281721
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All DBs
Position
11:19946732..19953789
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AA seq
191 aa
AA seq
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MGKQNSKLTPEVMEDLVKNTEFNEHELKQWYKGFLKDCPTGRLNLDEFQQLYIKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITKVE
MLEIIEAIYKMVGSVIMMKMNEDGMTPQQRVDKIFCKMDKNNDDQISLDEFKEAAKSDPS
IVLLLQCDMQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagaacagcaagctgactcccgaggtgatggaggatctggtgaagaacaca
gagtttaatgaacacgagctgaagcagtggtacaaaggcttcctgaaagactgccccacc
ggcaggctgaacctggatgagttccagcagctctatatcaagttcttcccttatggcgat
gcatcaaagtttgcacagcacgccttcagaaccttcgataaaaacggagacggcaccatc
gatttccgagagttcatctgcgccctgtccatcacatcccgcggcagctttgagcagaaa
ctcaactgggccttcaacatgtatgacctggacggggacggcaaaatcaccaaagtggag
atgctggagataatcgaggcgatctacaaaatggtgggctctgtgatcatgatgaagatg
aacgaggacggtatgacaccacagcagagggtggacaagatcttctgcaaaatggataag
aacaacgacgaccagatctcattggacgagttcaaagaggcggcgaagagcgacccgtcc
atcgtgctcctgctgcagtgtgacatgcagaagtga
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