Pseudoliparis swirei (Mariana hadal snailfish): 130201084
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Entry
130201084 CDS
T09868
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201084 (atl1)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130201084 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
130201084 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
130201084
NCBI-ProteinID:
XP_056281746
LinkDB
All DBs
Position
11:complement(20339674..20350932)
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AA seq
480 aa
AA seq
DB search
MDFMLRYMYKHASEDWLGDADEPLTGFSWRGGSERETTGIQVWSEVFLVDKPDGRKVAVL
LMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNISQNVQEDDLQHLQLFTEYGRLAMEE
TFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLEKRLKISENQHEELQNVRKHIHSCFTN
ISCFLMPHPGLKVATNPNFDGRIIEIDGEFINNLKVLVPWLLSPRNIDVKEINGSKITCR
GLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAAARDLYNKKMEEVCGGDRPFLA
PSELQARHGAIREEALQVFRVVKKMGGEEFSRRYLQQLEGEVDEVFVQYIKHNDSKNIFH
AARTPATLFVVIFVMYVAAGITGFVGVDVIASLCNMILGLALITLCTWAYIRYSGEYREL
GAVIDQVAGALWDQGSTNEALYKLYNVAANHRHLYHHAFPGGPRASGEVPEEEEEEQKRD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacttcatgctgcgctacatgtacaaacacgcatctgaagactggctcggagacgca
gacgaacctctgaccggcttctcctggagggggggctccgagagggagaccaccgggatc
caggtctggagcgaggtcttcctggtggacaagccggacggaagaaaggtggccgtgttg
ctcatggacacacagggcacgttcgacagccagtccacgctgagggattcggccaccgtg
ttcgcactgagcaccatgatcagctccatgcaggtttacaacatctctcagaatgtgcaa
gaggacgaccttcagcacctgcagctcttcaccgagtacggcagactagcgatggaggag
acgttcctcaaaccgttccagtccatgattttcctcgtccgagactggagcttcccgtac
gagtttccctacgggcaagaaggaggcatgaagttcctcgagaagaggctgaagatctcc
gagaaccagcacgaggagctgcagaacgtgcgtaaacacatccactcgtgcttcaccaac
atctcctgcttcctgatgcctcaccccggcctcaaagtggccaccaaccccaactttgat
ggacggatcatagagatcgacggcgagttcataaacaacctgaaggttctggtgccgtgg
ctcctcagtcctcgcaacatcgacgtgaaggagatcaacggcagcaaaatcacctgcaga
ggcctggtggagtacttcaaggcgtacatcaaaatttaccaaggcgaggagcttccacat
ccaaagtccatgcttcaggccacagcagaggcgaacaatttggccgcagtagcagccgca
agggatctgtacaacaagaagatggaagaggtgtgcggcggggaccggcccttcctggct
cccagcgagctgcaggcccgacacggcgccatcagggaggaggccctgcaggtgttccgg
gtggtgaagaagatgggcggcgaggagttcagccgccgctacctgcagcagctggagggc
gaagtcgacgaggtgttcgtccagtacatcaagcacaacgattccaagaacattttccac
gcggcccggacgccggccaccctgttcgtggtcatctttgtgatgtacgtggcggcgggc
atcacgggctttgtgggcgtggacgtcatagccagcctgtgtaacatgatcctgggcctg
gcgctgatcacgctctgcacctgggcctacatccgatactccggggagtaccgggaactc
ggcgccgtcatcgaccaggtggccggtgcattgtgggaccaggggagcacaaatgaggct
ctctacaagctgtacaacgtagcggccaatcacaggcacctgtatcaccacgccttcccc
ggcgggccgcgggcctcgggggaggtgccggaggaggaggaggaggagcagaagagggac
tga
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