Pseudoliparis swirei (Mariana hadal snailfish): 130201111
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Entry
130201111 CDS
T09868
Symbol
qkia
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130201111 (qkia)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130201111 (qkia)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_KRR1_2nd
KH_12
KH_PNO1_2nd
KH_FAR1_2nd
Enolase_N
Motif
Other DBs
NCBI-GeneID:
130201111
NCBI-ProteinID:
XP_056281797
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All DBs
Position
11:4298038..4362741
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AA seq
395 aa
AA seq
DB search
MMVGEVDVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
SVNGLVDRHPLELPEPVGPIVHLQEKLFVPVKEFPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQGRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNIKTSTLAFSLAAAAAAAQGQRLIASPTGQMM
APQGLRPPTSGGGQIMNLIRSPQMAAMMTNGAPTLVPPSPDGGLIYTTPYDYPYALAPTS
LLEYPIEHSGVLGKRAWGSMGPAGAMANFGQLGQEGGLFYPGAGVLDMAAMSHNQDMLKG
AMASKVRRHDTRVHPYQRIVTADRGQFSLLAPLCS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggagaggtcgacgtgaaggagcgaccgaggccgagtcccgactatttgatg
caattattaaacgagaagaagctcatgaccagcttgccaaatctctgcggcatcttcaca
cacctggagaggcttcttgacgaagagatcaacagagtgcgtaaagacatgtacagcgac
tcggtgaacggcctcgtggacagacaccccctggagctgcccgagcctgtcggacccatc
gtccacctgcaggaaaaactgtttgtgcctgtcaaagagttccccgattataactttgtg
gggagaatcctcggccctcgcggactcacggccaagcagctggaggccgagacgggatgc
aaaatcatggtgcgaggcaagagctccatgagggacaagaagaaggaggagcagaacaga
gggaagccaaactgggaacacttaaacgaagaccttcatgtcctgatcacagtggaagac
acgcagggcagagctgagatcaagatgaggagagcggtggaggaggtcaagaagcttctc
gtacctgctgccgagggagaagacaacttgaagaagatgcagctgatggagctggcgatc
ctcaacgggacgtacagagacaacaacatcaaaacatccacccttgcattctctcttgca
gcggcggcagcggccgctcagggccaacgtctcatagcgagccccacaggtcagatgatg
gctccccagggactccggcccccgacatcgggtgggggtcagatcatgaacctcatccgg
tcccctcagatggccgccatgatgaccaatggcgcccccaccctggtgcctccctcgccg
gatggcgggctcatctacacgaccccttacgactatccttatgccctggcccccacctcc
ctgctggagtaccccatcgagcacagtggggttcttggtaagagagcctggggaagcatg
ggtccggcgggtgcaatggccaactttggccagctcggacaggagggaggcttgttttac
cccggagccggggtgctggacatggctgccatgagccacaatcaggacatgttgaaaggt
gcaatggcttctaaagtgagacggcatgacacgcgggttcatccttaccaaaggattgtg
accgctgacagaggtcagtttagtctcctagctcctctctgctcttga
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