Pseudoliparis swirei (Mariana hadal snailfish): 130201183
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Entry
130201183 CDS
T09868
Name
(RefSeq) microtubule-associated protein 1S-like
KO
K10429
microtubule-associated protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130201183
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130201183
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130201183
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130201183
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
130201183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Lactamase_B_6
Reovirus_L2_8th
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
130201183
NCBI-ProteinID:
XP_056281917
LinkDB
All DBs
Position
11:17707280..17719237
Genome browser
AA seq
1292 aa
AA seq
DB search
MASGRVPEREVREESRRAATANPPDFSIHRYSLLIITGRTAHLEHTGPISRDIERGIRSW
DIDLQSCNLDLYLQEFLSHHTASFKGAGQKCLRHSTRVLDTQVLISPSQEQARSEVCALL
SRDSAHKLLILAGQSEEGSGDLVFHQGLFSPQQLKRILTEQFIDQESSASSSKLSLTLSC
PNIGQWRKTLVGNEPFTLRINPPEVLPAMETLGEFTSLISGTLSPPSPFDLLPPPVTVGF
LKLSRPCCYVFPAGRGDCAFFAVNGFTVLVDGGSDSQACFWKLVRHLDRVDAILLTHIGT
ENLPGVNVFLERKVAELELSADIKDDSSKRLISPELGVVFFNAPCRLQVDEHPCLDGVLK
SAHQAALTLQLLKKLDIRPQPLFRPPGVPLEPLTLFQKMGVGQLDLYILSPGKNSQEYQT
LMQDWPDVASESKTLPVTTLASVSALLVWHPACPQEKVVRVLFPGVTPQEKLLLGLEKLK
GLAFLQKPTVTTGDMDRLGEGRKIKESQESGRPHGKESTPKHGKEAGLREEGKEVPGREK
GKVLNGVNSRDADKTRNKDAAGVKQKAASTEKNASKKGGRTDGKKEEKPGNNQENGRGEK
DILSFKPKNENKIKLKKEARNDFKTGVNKTRKPSGKDATNGKKVNVKTETKPQTESVLET
EPEGYPPGSTLFTPEDMTEDSLRPREETERGEAHVEKSDKAKESGKEKSFGGLSVVAEEA
AEIMGGESGDKGAQDETRTGEKADADLQKNARPEKVLGFPSPLNKAPKNECEAQLDLTPT
EYTLLDGALRNSPPSRSSPENRQEPASPDSRPNSAGHTPYCLSPGDVWCNRATLNRLQGQ
MGDVEPADVNQSDGSSKQSEKSNLESHTAPRERQLSFLSLGSFKEGPSDPFPSFTTTTTH
SMPAEVSSPQSTEVDESLSMSLEQGPTTCSQREGDDSVNNSHSNGGHFAGMSLPIKKPAR
SSAEIGRPPSSLTLNLEASARDVDLCLVSPCEFKHLKQPESGEPPRGAFHPHHHGTNNAN
IDASPSESCAPVLTEDCCPSTTADGCLDSDEEDESSSEPSNSPRGLQSGQALPPDPLPVP
FRDNPPPPPHPDASMPVPQAESDARGKKAKATGMRGKKTQTVVEVSQRSGSGKSRTGIQS
GVPKGGVSSARTPSSGTRPALAKSSPNPGAKCTSGEEVSVYVDLAYIPSGPSSPTVGVDF
FRCIRSSCYVVSGDSQEKEEIMRRTLDALLDAKTSWPDSMQVTLIPTFESVPMQEWYQQT
LDRQKELGIAVLGSNSTVAMQDETFPACKIEF
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggtagggtgccggagagggaggtccgagaggagtcgaggcgcgccgccacg
gcgaacccccctgacttcagcatccacagatactccctgctcatcatcacgggacggacc
gcgcacctcgagcacacgggacccatcagcagggacatcgaacgagggatccggtcatgg
gacatcgacttacaatcctgtaacctggacctgtacctccaggagtttctctcccaccac
acggcctccttcaagggtgcagggcagaagtgtctgcgccatagcaccagagtgttggac
actcaggtgctgatcagtccgtctcaggaacaggctcgttcagaggtgtgtgctctgctg
tccagggactcggcccacaagctgttgatcttggccggtcagagcgaggagggaagtgga
gacctcgtgtttcaccaaggcctcttctcaccgcagcaactgaaacgaatactaacggag
cagttcatagatcaagagagctccgcctcctcctccaaactcagcttgaccctcagctgt
cccaacatcggccagtggaggaagactctcgtggggaacgagcccttcacgctgcgcatc
aaccctcccgaggtgctgcccgccatggagaccctgggcgaattcacctccctcatctcc
ggcaccctctccccgccgtcccccttcgacctcctgcctcctcccgtcaccgtgggcttc
ctcaagctgtcccgcccctgctgctacgtgttccccgcgggccgcggcgactgcgccttc
ttcgccgttaacggcttcacggtgctggtggacggcggctccgactcccaggcctgcttc
tggaagctggtccgacacctcgaccgagtcgacgccatcttgctgacgcacatcgggacg
gaaaacctgcctggggtcaacgtctttctggagaggaaggtggccgagttggagttgagc
gccgacatcaaagatgactcctccaagaggctgatctccccggagctcggagtggtgttc
ttcaacgccccctgcaggctgcaggtggacgagcatccttgtctggacggtgtgctgaag
agcgcccaccaggcggccctgaccctgcagttgttaaagaagttagacatcagaccgcag
ccgttgtttcgcccgccaggggttccccttgaaccgctgaccctgttccagaagatggga
gtgggccagttggatctatacatcctcagccctggtaaaaacagccaggagtaccagacg
ctcatgcaagactggcctgacgtggcatccgaatccaaaactctccccgtcaccacactg
gcttcagtgtccgccctgctggtctggcacccggcgtgtccccaggagaaggtggtcagg
gtgttgtttcccggcgtcaccccacaggaaaagctgctgctggggctcgagaagctgaag
ggtctggccttcctccagaagcctacggtgaccaccggggacatggatagactcggggag
ggtagaaagatcaaggagagccaggagagcggcaggccacacgggaaggagtcgacaccc
aaacatgggaaagaggcgggactcagagaagaaggaaaggaggtgcctgggagggaaaag
gggaaagtgttaaatggagtcaattcaagagatgccgataaaaccagaaacaaggacgcg
gcgggcgtgaagcaaaaagcggcatcgacggagaagaacgcctcgaagaagggaggaagg
acagatgggaaaaaggaggagaagcctgggaataaccaggagaacggtcggggggagaag
gacattctctctttcaaaccgaagaacgaaaataagatcaagctcaaaaaggaggcgagg
aatgacttcaaaacaggggtgaataaaacaagaaaaccatcggggaaggatgcaaccaat
gggaagaaggtcaatgtaaagactgagacaaaaccccagacggagagtgttttggaaaca
gagcctgaagggtatccccctggctccacgttgtttacccctgaggacatgacagaggac
tctctcaggccccgggaggaaactgaaagaggtgaggcgcatgtggaaaaatctgataag
gcgaaggagtcaggaaaggaaaagagcttcggaggcctgagcgtggtagccgaagaagcc
gcagagataatgggaggagagagcggtgataaaggagcgcaagacgagactcggaccgga
gagaaagctgacgcggacctgcaaaaaaacgccaggccagaaaaggttttagggtttcca
tcccccctgaacaaggcaccgaagaacgagtgcgaggcccagctggacttgacaccgacc
gagtacactctcctggacggggcgttgaggaacagccccccgtcacgatcctctccggag
aaccgacaagagcccgcctccccggattcgcggcccaacagtgcgggccacaccccttac
tgcctctccccgggcgatgtgtggtgcaacagggccacgctcaaccggttgcagggccag
atgggcgacgtggagccggcggatgtcaaccagtcggatggatcatccaagcaaagtgag
aaaagcaatctagagagtcacacagcccccagagagaggcagctaagtttcctctcgttg
ggttcctttaaagagggaccttcagacccctttccctccttcaccaccaccacgacacac
tccatgccggcagaggtgagctcgcctcaatccacagaagtagacgaatcgctgtccatg
tccttggagcagggaccgaccacatgcagtcagagggagggcgacgacagcgttaacaac
tcccattccaacggcggccattttgccggtatgtccctaccgataaagaagcctgccaga
tcgtccgcagagatcgggcggcctccgagctcgctcacgctcaatttagaggcctcggct
cgcgatgtggatctgtgtctggtttccccctgcgagttcaagcatctcaaacagcccgaa
tccggcgagccccccagaggagccttccatccgcatcaccacggcaccaacaacgccaac
atagacgcatcgcccagcgagtcgtgcgcccccgtcttaacggaggactgctgcccgtcc
accaccgcggacggctgtctggactcggacgaggaggacgagtcgagcagcgagccgtcg
aattctccccgcggtctgcaatccggtcaggctctgcccccggaccccctcccggtcccg
ttcagggataacccgccgccgcccccgcatccggacgcgtccatgcccgttcctcaggcc
gagtccgacgcccgcgggaagaaagctaaagccaccggaatgcgggggaagaaaactcag
actgtggtcgaggtctcccagagatccggctcggggaaaagccggacggggatccaaagc
ggagtcccaaaggggggtgtctcgtctgctcgtacgccatcctccggcacccgcccagca
ctggcgaaatcctcccccaatccaggcgccaagtgtaccagcggcgaggaggtcagcgtg
tacgtggacctggcctacatcccctctggaccctcctctcccaccgtcggcgtggacttc
ttcaggtgcattcgctcctcctgttatgtcgtcagcggcgacagtcaagagaaggaggaa
ataatgaggcgcacgctggacgcacttctggacgccaagacgtcctggccagactccatg
caggtgacgttgatccccaccttcgagtcggtgccgatgcaggagtggtaccagcagacc
ctggaccggcagaaggagctgggcatcgccgtcctggggtccaacagcaccgtcgccatg
caggacgagacattccccgcatgcaagatagagttctga
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