Pseudoliparis swirei (Mariana hadal snailfish): 130201223
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Entry
130201223 CDS
T09868
Symbol
ccdc88c
Name
(RefSeq) protein Daple isoform X1
KO
K25811
protein Daple
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130201223 (ccdc88c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HOOK_N
Nup54
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
130201223
NCBI-ProteinID:
XP_056281995
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Position
11:complement(6909918..6957736)
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AA seq
1971 aa
AA seq
DB search
MDVTLSELLATFMESPLVVWVRTLGPLGSCDDAGSEERVNMFMELVDGVFLHKIMTHIDP
SPTNQRLNKNVNNDLSLRLYNLTILTRHIRTYYQETLQQLIVMPLPNILCIAKDPISAKS
MEQLKILLLLILGCAVQCERKEEMIEKIKLLDIETQAAIVSHIQEVTHNQLNVLDLSWLE
DELQLAQDELEPLSRNMAASLQQLIDQRDKASEVIVDLTQERDYLSSQQPQEWCRNLGMS
SPDCGQSSGGVGVMKGGSAVTGLTKEEKQHLSVELADTKAKLRRYRQELEEKTEQLMDSK
HEVERLDQELQRQKQENQSLSCEARSVRVYRDEVDSLRERAARVDRLETELTRCKEKLND
VHFYKTRMEELREDNLTLMETKVLLEEQLSTSRGRCDKLHTLEKDNLLLRAKTHDLEMDR
DNERRRLEELVEENMLLEIGQKQSMNESAHLGWELEQLSKNHDNTNTDTRKSLVDELNEC
VSSRVLKLEKENRELQASIEGLKEENHLLQEQQLHTQERNRENQGLSKKVDCLQGLLDQE
RLTNQDMESLGEEILKEKQILGRDMHTLRAEKDRQISQLESEKQHLSDAVASLQERAQSN
DEATVREVETENRLLHQSITDTSSRLASLETQLKLASEDADRLRERAGRCDEYEREAARL
ERSRDSLNREVASLRACSERSEALEKQMSSLEQEVHRLKREAEEAQREQQRLVRHEAENS
LLSKENLDLRCSLENLRSSSARLATLQEEHKEAQRETQDVQRKLEEAREEAQGERKRAER
LELIVAALNQEKHRLGEEVQRSREEREDEESERQDTQAREEELRREVEEMKEERRRREEV
EKERRKLQLDLEQSEKGRKHLEKESWKIRTLLEAKETELEENATRLATVKKEGAILGKEV
DRLKEVSVKAKESERENKELQKRATIDKRTLATLREELVSEKLSVQQQSVELERLNQELE
KIGLNREKLLQQEHTQEDSRYRLLESRLEETVQQTLKVREEKISRLERKLEESNTLNTTL
RAKLTTVSMCAQTSFKEVSGLYFKMCNNVFCFFQGEENHNYQQCSGGDRSQGSATAELLR
IKDHLIDVEKNSASLQMESSLLKGQLKQLENQNTYLNNQMLGLQRHTTTLQEQNSSLHTQ
TAKLQVENSTLSSQSASLMAQNAVLQGQVTALESEVETWQRQREEAWRARESVLSDHERL
LSVHERQAHEYEQLISQHAALKGKQRTLEGEHRTLHSKCCTLLQQKEKWEEQERHGRKEK
EELNQEIQKSRLQEQENLQLKTEVDRLRERQTQQSEQCEGLQQRMNDLKSSLSSAQREES
RWMAQYDTLMEQHQGLDLTMTKLDNHCELLSRLKGNLEEENHHLLSQINLLSQQNHTLLE
RSMESKELCHQEQKLYIDKLNALRRQKEKLEEKIMDQYKFYDPTPKKRSQWSGAKALAKL
IKPRKESSRERGADRDKEGGKERERAKSAPDIPLPSPPPLLPPETPPPLPHRTASDTLDS
GRAHSNHNNHTSSTSLGPQSPALTPIGRGLMDRGRGVYRSSTPGGSSESVNGEDGLGQAQ
TQRALSSTPSHPSPALGLTSCSRPGHGLGRRPRGLLFDEDTRHNSSDSMFGQHGNTGGRP
GSADFSHNTSSSNSPVNGRDSLVHQARSASLSSDDVMGLSQSQQTLSRSSTLPYDQAPQR
AQPQRGGGVRSKTRPGSPGSEMVTLEEFLQESNKKSPPMVSTGSKEDLMMDYFTSSPAPA
ARDQATPTSYVTPTVQSSNQRPGQSVKPSPRQPVGQSPASGQPVAQSSSQSLSRAFSLAS
ADLLHSNGPDSFRGAEGQSDVVVRRQGGGASGRERPLSARLADPTNQHGDGSFLNPPIHH
SSSLNLQTDRHTERERERGKTAVSQNGPTSSSSYHHRGEVAMVTPVRAVPATQPDKASEH
REVLREGQSDYASHLTKESESCDAVERPKSTPASPDPNNDPQTVWYEYGCV
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgactctgtccgagttgctggccaccttcatggagtcgccgctggtggtgtgg
gtgaggacgctgggtcctctgggctcgtgcgatgatgcgggctccgaggagcgcgtcaac
atgttcatggagctggtggatggcgtctttctgcacaagatcatgacacacatcgacccc
agcccaaccaatcagaggctgaacaaaaacgtgaacaatgacttgtctcttcgcctatac
aacctgaccattctcaccagacacatcaggacgtactaccaggagaccttacagcagcta
atagtcatgccccttcctaacattctctgcatcgccaaggatcctatatcagctaagagc
atggagcagctgaaaatacttttgttgctgatactaggctgtgctgtccagtgtgagcgt
aaggaggagatgatagagaagatcaagctgctggacattgagacccaagctgccatcgtc
tctcacatccaggaggtgacccacaaccagctgaacgtcctggacctgtcctggctggag
gacgagttgcagctggcacaggatgagctggagcctctgtcccgcaacatggcggcatcg
ctgcagcaactgatcgaccagagagacaaagccagtgaggtgattgtggatctgacccag
gagagggactacttgtccagtcaacagccccaagaatggtgcaggaacctgggcatgagc
agcccagactgtgggcagagttctggaggagtgggagtaatgaaggggggctcggctgtg
accgggctgaccaaagaggagaagcagcatctgtccgtggagctcgccgacaccaaagcc
aagctccgcagatacagacaagaactggaggagaagacagagcagctgatggattcaaaa
catgaagtggagcgactggatcaggagttacaaagacagaaacaagagaaccagtcgctg
tcttgtgaggctcgttcggtccgagtgtaccgggacgaggtggactcactgagggaaaga
gcggcgcgggtcgaccgactggagactgaactgaccaggtgtaaagagaagctcaacgat
gttcacttctacaagaccagaatggaggagcttcgcgaggacaacctgaccctcatggag
acaaaggtgctattggaggagcagctttccacctccagggggcgctgtgataaactgcac
acgctggagaaagacaacctcttacttcgggcaaaaacacacgacctggaaatggacagg
gacaatgaacgtcggcggttggaggagctggtggaggagaacatgctgctggaaatcgga
cagaaacagagtatgaacgagtcggctcacctgggctgggagctggagcagctgagcaag
aaccatgacaacactaacacagacactcgtaagtcgctggtcgatgagctgaacgagtgt
gtttccagtcgggtgttgaagctggagaaggagaaccgggagcttcaggcctccatagag
ggactgaaagaggagaaccacctcctgcaagagcagcagcttcacacccaggaacgaaac
agggagaaccaaggcctcagcaagaaggtggactgtctccagggtttattggaccaggag
agactgaccaatcaggacatggagtccctgggagaggaaatattgaaggaaaaacagatt
ctgggcagagatatgcatactctgagggcagaaaaagacagacagatctcacagttggag
agcgagaagcagcacctctctgacgccgtggcgtcccttcaggagcgcgctcagtcaaac
gacgaggcgaccgtccgggaggtggaaacggaaaaccgcctactgcatcagagcatcact
gacaccagctcccgattggccagcttagaaacccaactcaaactagccagtgaggatgca
gataggctgagggagagggcggggcggtgtgatgagtatgagcgtgaagcggcgaggctg
gagaggagcagggactccctgaacagagaggtggcctctctgcgtgcatgcagcgagcgg
tccgaggctctagagaagcagatgtcctccctggagcaggaggtgcacaggctgaagagg
gaggcagaggaggcccagcgggagcagcagcgactggtgaggcacgaggcagagaacagc
ctgctgtcaaaggagaacctggacctgcgctgctccctggaaaacctgcgctcctcatcc
gcccgcctggccaccctccaggaggagcataaagaggcacaaagagagacgcaggatgtg
cagaggaagctggaggaggcccgagaggaggcccaaggagaaaggaagagggcggagagg
cttgagctgattgtggcagccctgaaccaggagaagcatcgcttgggggaggaagtacag
aggagcagagaggagagggaagacgaggagagcgagaggcaggacacccaggcccgagaa
gaggagctgagaagggaagtagaagagatgaaggaggagcggagaaggagggaggaagtt
gaaaaggagaggaggaagctccaactggacttggagcagtcagagaagggcagaaagcac
ctggagaaggagagctggaagatccgaacgctgctggaggcgaaagaaacagagctggag
gagaatgccacacgattggctactgtgaagaaggagggcgcaattctgggtaaggaagta
gataggctgaaggaggtgtcagtcaaagccaaggagtcggagagggagaacaaggagctg
cagaaacgggcaactattgacaagaggactctggccactctgagagaggagttggtgtcg
gagaagctgagcgttcagcagcagagtgttgagttggagagactcaatcaagaactggaa
aagatcggcctgaacagagaaaagctgctacagcaagagcacacacaggaggacagcagg
tacaggctgctagagtctcggcttgaggaaactgtccaacagacgttaaaagtgagagag
gagaaaatctcccgtctagaaaggaaactggaagagagcaacacgctcaacactacgcta
cgtgctaagctaaccactgtaagcatgtgcgcacaaacttctttcaaagaagtttccggc
ttgtattttaaaatgtgtaacaatgtgttttgttttttccagggggaagaaaaccataac
tatcagcagtgctcgggaggtgaccggagtcaagggtcagccactgccgaactgctccga
atcaaagatcatctcattgatgtcgagaagaatagtgcctccctgcagatggagagcagt
ctgctgaaaggccagctcaaacagctggagaaccagaacacatatcttaacaaccagatg
ttggggctgcagcgacacaccaccaccctgcaggagcagaattctagcttacatacacag
actgcaaaactccaggtggagaactccacgctctcctcccagagtgcatctctcatggct
cagaatgccgtgctgcagggccaagtcaccgccttggagtcggaggtggagacgtggcag
aggcagcgcgaggaggcgtggcgagccagagagagcgtgctcagcgaccacgagcgcctg
ctgagcgttcacgagaggcaagcgcatgagtacgagcagctcatcagtcagcacgctgcg
ctgaagggcaagcagaggacgctggagggcgagcaccggacgctgcacagcaagtgttgc
actttgctgcagcagaaggagaaatgggaggagcaggagaggcacggtcggaaagagaag
gaggaactgaaccaggagatccaaaagagtcgtcttcaagagcaagagaatctacagctc
aaaacagaagtggacagattaagagagagacaaacgcagcagtcagagcaatgtgaaggg
ctgcagcagcgcatgaatgacctcaagagctcactaagctccgcccagcgggaagagagt
cgatggatggcgcaatacgatacgctaatggagcaacaccagggcctggatctaaccatg
accaaactagacaaccactgtgagttgttgagccgactgaaagggaacctggaagaggag
aaccaccacctcctgagtcagatcaacctgctgagtcagcagaaccacactctacttgag
aggagcatggagagcaaagagctgtgtcaccaggagcagaaactatacattgataagctg
aacgctctccgtcgccagaaagagaaactagaggagaagatcatggaccagtacaagttc
tacgaccccacaccgaagaagaggagtcagtggtccggagccaaagcgttagccaaactg
atcaaaccccggaaggagagcagcagggagagaggggccgaccgagacaaggagggcggc
aaagagagagagagagcaaagagcgccccagacatcccactgccttccccgccccccctc
ctccctcctgaaaccccgccccctctaccccatcgcacagcgagtgacacgctggacagc
ggccgtgcccacagtaaccataacaaccacaccagcagcacaagcctgggaccccagagt
cctgcgctcacgcccatcggccgaggtttgatggacaggggccgcggtgtttaccgtagc
agtactccaggaggcagcagtgagagtgtcaatggagaggatggacttggacaagctcag
acccagagagctctgagctcaactcccagccatccgtcccccgcattaggcctcactagc
tgctccagaccgggacatggtctcggccgcaggcccagaggtctattatttgatgaagac
acccgccacaactcctctgactccatgtttggtcaacatggcaacacgggaggtcgtccg
gggtcggcagacttcagccacaacacctccagctccaactcgcctgtcaacggcagagac
tcattggttcatcaggctcgctcagccagcctctctagtgacgatgtcatgggtctgagc
caatcacaacagaccttgtcacgtagctccactcttccatacgaccaagcgccccagaga
gcccaaccgcagcgcggaggcggggttaggtctaagacccgccctgggtctcctggaagt
gagatggtgacactggaagagtttctacaagagagcaacaaaaagtcccctcctatggtg
tcaacgggaagtaaggaggacttgatgatggactatttcaccagtagtccggctcccgct
gccagagatcaggcgactcccaccagctacgtcacgcccactgtgcagtcgtccaaccag
aggccgggccagagtgtcaaaccctcgccccgccaacctgtaggccaatcccctgcctcg
ggccagcctgtcgcccagagtagcagccaatcactgagcagggctttcagcctggcctcc
gctgatttgctgcactccaacggaccagacagtttccgtggagctgaaggccaatcggat
gtggttgttcggagacaagggggaggggctagtgggagagaacgtccactctctgctcgg
ctggccgacccgaccaatcagcacggagacggcagcttcctgaatccgccgattcaccat
tcgtcctctcttaacctgcaaacagacagacacacggagagagaaagagagcgagggaag
accgccgtctctcagaacggccccacctcgtcctcctcctaccaccaccgcggagaggtc
gccatggtaacccccgtaagggccgtgcctgccacgcaacccgacaaggcctcagagcac
agggaggttttaagggagggccagtcggactacgcctcccacttaacgaaagaaagtgag
agctgtgacgccgtggaacgcccgaagagcacgcctgcttcccctgaccccaacaatgac
cctcagactgtgtggtatgagtacggctgtgtctaa
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