Pseudoliparis swirei (Mariana hadal snailfish): 130201237
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Entry
130201237 CDS
T09868
Symbol
pacs2
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2 isoform X1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201237 (pacs2)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
130201237 (pacs2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
130201237
NCBI-ProteinID:
XP_056282023
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Position
11:20499535..20556357
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AA seq
890 aa
AA seq
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MAERSGRLSFPGSGALNRPVPMNLFATWEIDGSSPNCIPRLCSLTLKKLVVMRELDKELI
SVVIAVKIQGSKRILRSHEIVLPPSGSVETDLALTFSLQYPHFLKREGNKLQIMLQRRKR
YKNRTILGYKTLAVGTIDMAEVMQHPTDGGQVLPLCSNQKELLGKVAEIWIFSLSSQPID
HEDAALQGGQKIKCSDNYSEEEYESFSSEQEASDDAVQVQDLEDDEYDVRKLKKQRRSIV
RTASITRQQNFKQRVVALLKRFRVSDEVLDSEQDPAEPTPEVEEEDLDLDSVEFENPSDS
GPELDDDDSVLSTPKPKLKPYFEGLSISSSQTEIGSIHSSRSHREPPSPIDLEKTKCVGA
KFPDDGVCDNVSFEQPEAVTPTTELEMDNMDTFLERLPPIGKMTKTESLIISSNRQEPKL
AGRRGRSTSLKERQPSRPQNERANSLDNERSLDTRCHLQIPRKTVYDQLNHILVSDNHLP
DSIILINTSDWQGQYLSDMLQNHHLPVVCTCTTADIQAAFNTIVSRIQRFCNCNSQTPIP
IKIAVAGAQHYLSVVLRLFVEHLSHKTPDWLGYIRFLIIPLGAHPVSKYLGTIDYRYNSL
FQDAAWRELFHKPEAPVIAQQNPDVVSRVTQYMVGANGAHQLPIAEAMLTYKQKRKKSFH
FDFAVSPDEDSCQKFIPFIGMVKVGLVEQTSATSGDSDDASPLLSSLLSSTPPQVSPALK
EASPTPPSSPSVTTSFCAYSSVGQVELMGLQVDYWVAPTERKKDMEKRDTSSKNTLKCNF
RSLQVSRLPLGGAEPSTQPIMSMTVVTKEKNKKVMFLPKKSKDKEVESKSQVIEGISRLI
CTAKHQQTMLRVLIDGVEWNDVKFFQLAAQWSSHVKHFPIGIFGHTKGPY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagaagcggccggttgagcttccccgggagcggagcgctcaacagaccggtg
cccatgaatctgttcgccacatgggagatagacggatcctccccgaactgcatcccgaga
ttgtgcagtctgactctgaagaagctggttgttatgagggaacttgataaagagctgatc
tctgtggtcatagcagttaaaatccagggctccaaacggatcttgaggtcccatgagatc
gtgctgccccccagtgggtctgtggagaccgatctggctctcaccttttcgctgcagtat
cctcacttcctaaaacgagaaggaaacaagctgcagatcatgctgcaaaggcggaagaga
tacaaaaaccggactatcttgggctacaagactctggcagtgggaaccatcgatatggcc
gaggtgatgcaacacccgacggacggcggccaggttctgcctctctgcagcaaccagaaa
gagctgctgggcaaagtggccgagatctggatcttttctctgtccagccagccgatcgac
cacgaggacgccgccctgcagggaggacagaagatcaaatgctccgataactactcggag
gaggagtatgagagcttctcctcggagcaggaggccagcgacgacgccgtgcaggttcag
gatctggaggatgacgagtacgatgtgagaaagctaaagaagcagaggaggtccattgtg
aggaccgcctccatcacccgacagcagaacttcaagcagcgcgtggtggctcttctcaag
cgcttcagggtttcagatgaggtgctggactcggagcaggaccctgcagagccgacccct
gaggtggaggaggaggacctggacctggacagcgtggagttcgagaacccgagcgacagc
ggcccggagctggacgacgacgacagcgtcctcagcacgccgaaacccaaactcaagcca
tatttcgagggtctctccatctccagctctcaaacggagatcggcagcatccacagcagc
cggagccaccgggagcctccgagcccgatcgacctggagaaaaccaagtgtgtcggggcc
aagtttccagatgacggtgtgtgtgataacgtctcctttgagcagcccgaggcggtgact
cccaccaccgagctggagatggacaacatggacacatttctagagcgactgccaccgatt
ggcaaaatgaccaagacagagtccctcatcatttcatccaaccggcaggaaccgaagttg
gcaggaagacgaggccggagcacatctctgaaggagcggcagcccagcaggccgcagaac
gagagggccaacagcctggacaacgagaggtccctggacacgcgctgccacctacagatt
ccgagaaagacggtgtatgaccaactcaaccacatcctggtgtctgataaccacctcccc
gacagcatcatcctcatcaacacgtcagactggcagggccagtatctctcagacatgctg
caaaaccaccacctcccagtggtctgcacctgcaccacagccgacatacaagctgcgttc
aacactatcgtctcccgcatacagagattttgcaactgtaactcccagacgcccattccc
ataaagatcgcagtggctggagcgcagcactacctcagtgttgttctgaggctgtttgtg
gaacacctttcccataagacccctgactggctcggctacatcaggttcctcatcatccct
ctaggtgcacatccagtctccaaatatctcggcactattgactatcgatacaacagtttg
ttccaagatgctgcttggagggagctgtttcacaagccggaggctccggttattgcccag
cagaacccagacgtggtgtcgagggtcactcagtacatggtgggagccaacggcgctcac
cagctccccatcgcagaggccatgctcacttacaaacagaagaggaaaaagagctttcat
tttgattttgcagtaagcccggatgaggactcgtgtcagaaattcatccccttcatcggg
atggtgaaagttggcctcgtggagcaaacatccgcaacgtcaggagactctgacgacgca
tcacctctgctctcctcgctgctctcctccacccctccacaagtatcaccggctctcaaa
gaggcgtcgcccaccccgccctcctctccatccgtcaccaccagcttctgtgcttacagt
tctgtaggtcaggtggagctgatggggcttcaggtggactactgggtggctcccacagag
agaaagaaagacatggagaagcgggacacctcctccaaaaacactctgaagtgcaatttc
cgctcgctgcaggtcagccggctgccactggggggcgcagagccgagcacccagcccatc
atgtccatgactgtggtgaccaaggagaagaataagaaggtcatgttcctgccaaaaaag
agcaaagacaaggaggtggagtcgaagagtcaagtgatcgagggcatcagccggctcatc
tgcactgccaagcaccagcagaccatgctgagagtactgattgacggcgtcgaatggaac
gacgtcaagtttttccagctggcggctcagtggtcatcacacgtgaaacatttccccatc
ggaatctttgggcacaccaaaggcccgtactag
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