Pseudoliparis swirei (Mariana hadal snailfish): 130201239
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Entry
130201239 CDS
T09868
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130201239 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130201239 (srsf5a)
Spliceosome [BR:
pswi03041
]
Common components
Common spliceosomal components
SR proteins
130201239 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
130201239
NCBI-ProteinID:
XP_056282027
LinkDB
All DBs
Position
11:20491814..20497532
Genome browser
AA seq
314 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGGMGGRFSGGGGGGGGGGGGGSSSSGGGGYRPSRSSGS
RLDRYGPPVRTDHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRS
DLKNAISKLDGSELNGRKLKIFEDSRSKSRSRSRSYSRSKSRSRSRNRSRSRSRSLSRTP
EKKTSGGGRASGRSPSRSRSRSRSKSRSKSRSRSKSRSRSRSRSPAPAQNKQSRSRSRSR
SRSRSRSASADSKH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgcgtcttcattggccgcttgagcccgcatgccagggagagggacgtg
gagaagttcttcaagggctatggccggattagggaaatcaacttgaagaatggatttggc
tttgtggaatttgatgaccacagagatgcagatgatgccgtgtacgagttgaatggcaaa
gaattgtgcagtgaaagggtcactattgagcatgctcgctccagaagagggagaggtggt
ggccccggaggaatgggaggacgtttcagtggcggaggaggtggtgggggtggaggcggc
ggcggcggaagcagcagcagtggaggcggtggctatcgtccatctcgcagcagtggttcc
agactggacaggtatggcccacctgtgcggacagatcacagactcattgtggagaacctc
tcttcacgaatcagctggcaggacctgaaagacctgatgagaaaagcaggcgaagttacc
tttgtggacgcacacaggcctaacaaaaatgaaggagtggttgagtttgcatcccgcagt
gacctgaagaatgccatctccaagctcgacggttcagagttgaatggacgcaagcttaag
atctttgaggacagcagaagcaagagccgctctcgctcccgcagctactcccgctcaaag
agtcgttccaggagccgcaaccgctccaggagccgctccaggtccctgagtcgcaccccg
gagaagaagacgtccggagggggcagagcgtcgggcagatccccctccagatccaggtcc
aggtccaggtccaagtctcgctcaaagtcccggtccaggtccaagtcccgttccaggtct
cgctcccgctcacctgcccctgctcagaacaagcagtcccgttcacggtctcgctcccgg
tctcgttcacgctcccgctccgcctctgcagacagcaagcactga
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integrated database retrieval system
