Pseudoliparis swirei (Mariana hadal snailfish): 130201243
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Entry
130201243 CDS
T09868
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130201243 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130201243 (pou2f1b)
03021 Transcription machinery [BR:
pswi03021
]
130201243 (pou2f1b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130201243 (pou2f1b)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
130201243 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
130201243
NCBI-ProteinID:
XP_056282037
LinkDB
All DBs
Position
2:complement(8898215..8921053)
Genome browser
AA seq
693 aa
AA seq
DB search
MADGGAASQDESSGPDAKVNNQSETTKCAMESGDGNTGIQINGFDFQRQTMPAITNAHAQ
ALLQQSKSEDSSALPTSVQQSVLPQTQLMLSGGQIAGLTLTPAQQQMLLQQAQAQLLAAA
VQHSASQQNSTTGASISASAAAPMSQLPMSQPIQIASQLQPQNLSLPQFVLLQPGHPIAT
LQQPTQFIISQPTQAQQGLLQAQGLLNLPQSQANLLPTQQSITLTTQPATPTRTTAATPI
QSLAHSQTTPKRLDTPTLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAESLTSDQSLSSPSALGSPGMGIEGI
NRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEK
RINPPSSCISGIGSTPIKTIFTPSSPLVASTASLVSSPTINTSTTLTVNPVMPLTSVSNL
SFTGTNTASVISAATPIFTTASSPSLSPSPTTILSNNSESKMQTIFNQIPTNILGSGQLM
VSASGLSAALQGAQLPGSFAAMAAAAGLNSGLMASSQFTQGGALLSLTGGLGGVLSPALM
NNNTLATIQGVYQSLASSGITSLDGSNLLFANTSAGTPIFLTPQNLSLLTGSPLSLVSAG
PGGLQIIADAHHQATTAAVPVQTSTITTASKAQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggaaagtggtgacgggaacaccggaatccaa
atcaatgggtttgactttcagaggcagacgatgccggcaatcactaacgcacacgcacaa
gccctcctccaacagtctaagtcggaagactcgagcgctcttccgacctccgtccagcag
agcgtattgcctcaaacccagctaatgttgtccgggggacagattgcaggattgaccctg
accccggcgcagcagcagatgttgctccagcaggcccaagctcagctgctggctgcagcc
gtgcagcattcagccagccagcagaacagcaccaccggggccagcatctcggcctccgca
gccgcacccatgagccagctgcccatgtcacagcccatccagatcgcctctcagctacag
ccgcagaatctaagcctgcctcagtttgttctgctgcagcccggccacccgatcgccact
ctacagcagcccactcagttcatcatctcacagccaacgcaggcccaacagggcctattg
caagcccagggtcttctgaatctacctcaaagccaagctaacctcctgccgactcaacaa
agcatcaccctcacaactcagcctgcgactccaacccgcacaacagcagccacacctatt
cagtccctggcccacagtcaaactacacccaaacggctagacacccccaccttggaggag
cccagcgatctagaggaactggaacagttcgccaagaccttcaaacagaggcgcatcaaa
ctgggcttcacacagggggacgttggcctggccatggggaagctgtatggaaacgacttc
agccaaacgaccatctctcgctttgaggccttgaatctgagctttaagaacatgtgcaaa
ctgaagccattgctggagaagtggctcaacgatgcagtttgtgcagagagcctgacgtct
gaccagtccctgtccagccccagtgccctgggctcccccggcatgggcatagaggggatc
aaccgcagacggaagaagaggaccagtattgagaccaacatccgagtggccttagaaaag
agttttctggagcagaaccaaaaacctacctctgaagagatcaccatgatcgctgaccag
ctcaacatggagaaggaggtgattcgggtctggttctgcaatcgccggcagaaagagaag
aggattaacccccccagcagctgcatcagcggaataggcagcacccccattaaaaccatc
tttacccccagtagccctttggtggccagcacagcaagccttgtgagcagtccgacgatt
aacacatccaccactctgactgtaaacccagtgatgcctctcaccagcgtctccaatttg
tctttcacaggcacaaacactgcatccgtcatctccgctgcgacgccgatttttaccacg
gccagctctccgtctttaagtccctcgccgacgaccattctgtccaataactcggagagc
aagatgcaaaccatcttcaaccagatcccgacaaacatcctgggatcggggcagctgatg
gtgtcggcgtcggggctgtcggcggcgctgcagggtgcacagttacccggcagctttgcc
gctatggctgctgctgccgggctcaattcgggactgatggcgtcctcccagttcactcag
gggggggccctgctcagtctgaccggcggcctcggcggcgtgctgagtcctgccctcatg
aacaacaacaccttggcgaccatccaaggcgtgtatcaatcgctggcttcgagtggcatc
acttctctggatggcagcaacctgctgttcgccaacacttctgccggcacgccgatcttc
ctgaccccccagaacctgtcgctgctcaccggctcgcccctcagcctggtgtcggccggg
ccgggggggctgcagatcattgctgacgctcatcatcaagccaccacggcggccgtgcct
gttcaaacctcgaccattaccactgcctccaaggctcagtga
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