Pseudoliparis swirei (Mariana hadal snailfish): 130201253
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Entry
130201253 CDS
T09868
Symbol
rab3gap2
Name
(RefSeq) rab3 GTPase-activating protein non-catalytic subunit isoform X1
KO
K19937
Rab3 GTPase-activating protein non-catalytic subunit
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201253 (rab3gap2)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130201253 (rab3gap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAB3GAP2_C
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
130201253
NCBI-ProteinID:
XP_056282046
LinkDB
All DBs
Position
11:complement(7681711..7710282)
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AA seq
1399 aa
AA seq
DB search
MSCSLLEFCRLQELKTVRDYLFLSQKPEPAEEKSPTENELSWDSSDWEATWDGGENKEEG
ASPATTVEEETTGQNAPWLQDCVVSLSPCADLLVVAREQKAVFLSAKWRTDDSGREEMTL
AVSWTGTLSTDEGECVSSSICIPLASQKRSSTGRPDWTCVVVGFTSGYVRFYTENGVLLL
AQLLHEDPVLRLKCRTYEIPRHPGVPEQHEELSILYPAALVTIDGFSLFQSLRACRNQVA
RATAAGSDVIQPPPLAYKKWGLQDMDTIVDHSSVGVMTLCVFDQMKNASILGGFNASVKG
SPPAMSRYVTVGGGPYTGFFYAVEGSSQPLLSHVALAVASKLTSALFSAASGWLGWNKHK
NEEEAVQKQRPKVEPVTPLGIRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVTLLDLAR
GIAIRMWKGYRDAQLGWLQVPEERGDREFSPSASLPRRHALFLVIYAPRRGILEVWGMQQ
GPRVGAFTVGKHCRLLYAGYRLMGVNSVTSKGWQLHTQQVCLLDPTTGALRTVNIPFHLA
LSDKKSERAKDMHLIKRLTTLLRSRGVEPDILEREAKSVLLDIKHPAIKKQALESLLSNR
NAPVSCLTGVTAALHETLKQQDPEEVDEALLQFCSSQLKLIQLYTDIQELHAGAEREASS
DNQDSLEGIEDELSRVGPTLQRYAQLTARPSVSFAQDSPDSPLPAQAFLSQMECTDDGGL
RVTRGSDTEWNHLGSFMFWGCLCGTSSPHQVCDTLQQAGISPQQLLSLLMSVWLQREKEV
LQKPEEAVRNLHTLLIALSNMEGAVEESWDPQSVSPWWQQVRCTCIQSHNAAAALLAAFV
AHRAAKASTMSRADSKLQSEWEAVSLELEQWVVCVRQLEDVLVLQTLLLVPPPPGAAGGA
AAQCSIKTLLEGGTGGIADSVSKWVFRHNLAPERLKEILQKREDKEADDQPEQRAGGGGG
EKEKEEEEKESPEVSDRTAELLVAVCQRFPHSLSPDLLFAHCCWEYVVQWNKDPEEGRYF
WLAVEHLKLVSSPYIQLGISAMMWSTFIVKRFSATAFLAEKVGKAPKDRLCRRDVGMGDK
AVTSFLGCCVELLQILMEVTAVLVKNPSHLSFIDYNADSAVEDVAPPELPVEESWSGAEG
PASLAELALEQRGVHFPLVQHHCLLASLLHAAMTFSLKVKPLSLFDSKGKNAFFRDLTTI
QLMPSGDMDPGLVSMRQEFLLRVLTGWVQALADPPGSAPGSTSPPLPSSGGPKADWWPSL
CLELGSLLQVNPDILRRHIVCELYNQGLDLRAEEVMLEVEDKDVLGSQLLVLTGQRLSYS
LLHSQSQTQAAMELLARLPPTLCTWLKAMDPSELRCPLLPLPQTSRLVGRLIEILPENHA
QYSLALHLLEAVDALTTED
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagcctgctggagttctgtcggctccaggagctcaagacggtccgggactac
ctgttcctgagccagaaaccagagccagcggaggagaagagtccaacagaaaatgagttg
tcctgggactcttcggactgggaggcgacatgggatggtggggaaaacaaagaggaggga
gcctctcctgccacaacggtggaggaggagaccacagggcagaatgccccttggctgcag
gactgtgtcgtgtccctgtcgccctgcgccgacctgcttgtagtggcccgcgaacagaag
gccgtctttctctcagctaagtggcgtacagatgacagcggccgagaagagatgaccttg
gctgtgtcttggactggaacccttagcactgatgaaggagagtgtgtgagcagctccatc
tgtataccattagcaagccagaagaggagctccacggggcgccccgattggacgtgtgta
gttgtgggtttcacttccggctacgtccgattctacacagagaacggggttctgctgctg
gcccagctgctgcacgaggaccctgtgctgaggctcaagtgtcgcacgtacgagatcccc
cgtcaccccggagtccctgagcagcacgaagagctcagtatcctctaccccgccgctctg
gtcaccatcgacggcttcagcctctttcaatctctgcgtgcctgccggaaccaggtggcg
agagcgacagcagctggtagtgatgtgatccaacctccccccctggcctataagaagtgg
ggtctgcaggacatggacaccatcgtggaccacagtagtgttggcgtcatgacgctgtgc
gtattcgaccagatgaagaatgcgtctatcctgggggggtttaatgcgtcggtcaaaggc
agcccccccgccatgagccggtatgtcactgtgggtggggggccgtacaccggcttcttc
tacgctgtggagggaagctcccagccgctcctctcccacgtggccctcgccgtggccagt
aaactcacctcggccctgttcagcgctgccagcgggtggctcggttggaacaagcacaag
aatgaagaggaggcggttcagaagcagaggcccaaggtggagcccgtcacgcctttgggg
atcagatttggtctcccagactcccgtcgtcacggcgagtccatctgcctgtccccctgc
aacacgctggcgggagtgacggacgactttgggcgagtcacgctgctggacttggcccgg
ggcattgccatccgcatgtggaaaggttaccgcgatgctcagctgggttggctgcaggtt
ccggaggagcgcggcgatcgggagttctcgccctctgcctcccttcccagacgccacgct
ctgttcctggtcatctacgccccccgcagggggatcctggaggtatgggggatgcagcag
ggccctcgagtcggagccttcactgtcggcaaacactgcaggctgctgtacgccggctac
cgcctgatgggggtgaacagcgtgaccagtaagggctggcagctgcacacccagcaggtg
tgtctgctggaccccaccacaggagccctgaggaccgtgaacatccccttccacctggcc
ctcagtgacaagaaaagcgagcgcgccaaggacatgcacctgataaagaggctaacgact
ctcctgaggagcagaggggtggagcccgacattttggagcgcgaagccaaaagtgtgctg
ctggatatcaaacatcccgccatcaagaagcaggctttggagtctctgctgtcaaacagg
aacgctcccgtctcctgtcttaccggcgtcacggccgccctacatgagactctgaagcag
caagacccggaggaggtggatgaagcattactgcagttctgctcctcgcagctgaaattg
attcagctctacaccgacatccaggagctgcacgccggggccgagcgagaggcctcgtcc
gacaaccaggactccctcgagggcatagaggatgagttgtcccgcgtcggccccaccctg
cagcgctacgcccagctcaccgccaggccgagcgtctccttcgcccaggactcgcccgac
tcgcccctgccggcacaagcctttctctcccagatggagtgcaccgacgacggcggcttg
agggtcacccgcggctctgacaccgaatggaatcatctggggagctttatgttctggggg
tgtctgtgtggaacgagctctccccatcaagtctgtgacaccctgcagcaggccggcatc
agtccacagcagctcctgtctctgttgatgagtgtgtggctgcaaagagagaaggaggtg
ctccagaagccagaagaggccgttagaaatctgcacacgctgctcatcgccctcagcaac
atggaaggggctgtcgaggagtcgtgggacccccagtctgtctccccctggtggcagcaa
gtccgctgcacgtgcatccagtctcacaacgccgccgccgctctgctggccgccttcgtc
gctcaccgcgctgccaaggcgagcaccatgagccgggccgacagcaagttgcagtcggag
tgggaggcggtgtcgctggagctggagcagtgggtggtgtgcgtccgccagctggaggac
gtgctggtgctgcagaccctgctgctggtgcctcctcctccgggggcagcagggggcgcc
gcagcacagtgctccatcaaaactctgctggagggaggcacaggtggcatcgccgacagt
gtctccaagtgggtgttcagacacaacctggcccccgagcgactgaaggagattctccaa
aagagagaagacaaagaggcagatgaccaaccggagcagagggcgggaggaggaggagga
gaaaaggagaaggaggaggaggagaaggagagcccagaagtctcagacaggacagcagag
ctgctggtggccgtgtgccagcggttcccccactcgctctcaccagacctgctcttcgcc
cactgctgctgggaatatgtcgtgcagtggaacaaggaccctgaggagggccggtacttc
tggttggctgttgaacatttgaagctcgtctccagtccgtacatccaactaggcatttct
gcgatgatgtggagcacgttcatcgtcaagcgtttctcagctacagccttcctagcggag
aaggtggggaaagctcccaaagaccgactttgtcgacgggacgtcgggatgggagacaaa
gccgtgacgtcgttcctgggctgctgcgtggagctgctgcagattctcatggaggtgact
gcagtgttggttaaaaatccgagccatttgtcttttattgattacaatgcggactctgcg
gtggaagacgtggcccccccggagttgcccgtggaggagtcgtggtccggcgccgagggc
cccgcctccctggccgaactggccctggagcagcggggcgtccacttcccgctggtgcag
caccactgcctgttggcctccctgctgcacgccgccatgaccttcagtctgaaggtcaaa
ccactcagcctgttcgacagcaagggtaagaacgctttcttcagagatctgacgaccatc
cagttgatgcccagtggagacatggaccccgggctggtctccatgcggcaggagttcctc
ctgcgggtgctgaccggctgggttcaggctttagccgatcctcccggctcggccccgggc
tccacgtccccccctctgccttcttccggtggccccaaagccgactggtggccctcgctg
tgcctggagctcggctccctgctgcaggtcaaccccgacatcctgaggcggcacatcgtc
tgcgagctctacaaccagggcctggacctgcgggccgaggaggtgatgctggaggtggag
gataaggacgtgctgggctcccagctgctggtgctgacgggccagaggctgagctactcg
ttgctccacagccagagccagacgcaggcggccatggagctgctggcccgcctgcccccc
accctgtgcacgtggctcaaggccatggaccccagtgagctgcgctgccccctgctgccc
ctcccccagaccagcaggctcgtcggccggctcatcgaaatcctgccggagaaccacgcc
cagtatagcctggccctgcacctcctggaggctgtggatgccctcaccacggaggactga
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