Pseudoliparis swirei (Mariana hadal snailfish): 130201270
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Entry
130201270 CDS
T09868
Symbol
ttll5
Name
(RefSeq) tubulin polyglutamylase TTLL5 isoform X1
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130201270 (ttll5)
04812 Cytoskeleton proteins [BR:
pswi04812
]
130201270 (ttll5)
Enzymes [BR:
pswi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
130201270 (ttll5)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
130201270 (ttll5)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
130201270 (ttll5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
130201270
NCBI-ProteinID:
XP_056282086
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Position
11:3506823..3562665
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AA seq
1298 aa
AA seq
DB search
MPAVVREKEDSESEDEDHACIAWSGLSKTIPILLFFPEAAVSKDGSICSTGERYHLAFKI
VRTESRLVRGLLTNHGFHEVHPNSNDFNLMWMGSHLKPYILRSLQDFQKVNHFPRSYELT
RKDRLYKNIQRMQQTHGFKHFHIVPLTFVLPSEYQEFCNCFAKDKGPWIVKPVASSRGRG
IYLVSNPNQILMDENTLVSRYINNPLLIDEFKFDVRLYVLVTSYDPVLIYMYEEGLARFA
TVKYDRTSKNIKNTFMHLTNYSVNKKSSDYVSCDDPEVEDYGNKWSMSAVLRYLKQEGKD
TTLLMRQVEDLIVKAVLSAELQIANACKMYVPHKTNCFELYGFDVLVDSNLKPWLLEVNL
SPSLACDAPLDLKIKASMIADMFSLVGFVCQDPLSRQPRSDRVTLDHSLKHPAAQRTQRQ
RSAPATNSDTEGSKDKLRSNQGQGESTLSLTADEIKVLRRIKEEYERRGGFIRIFPTAET
WELYGGYLESKTSLNFMLANRLFHERNVNGNVQPQVDASHGRHDVQYERKLPPLEARKRR
QRHPTHRSAAGKKKSGKEPKASPMESSSQEGEDCAQEEREEAKQALESVSHKALVTEQRK
QVALSGSEAAPHNARPRVHLLNILQQGWDLSKVQARMAFSSYLQRVQQRLLVESRANTIP
AWPDKDSDQMELVVRFLKRAASNLQQDIKVVLPSRQLPLQDRRRILSHQLGEFIHSYNKE
TEHVVKKNEKSMEEHCVNPSVFQEYIAAASENDLEEVLTFYTQKNKSAAVFLGTKLRSVK
RDGRELNALRDYGNCENSKTLPVAKEDSSASESSLSRGKVSCDPDIESQPSVHRTGQTQP
EVQASSFPVTLDCTHTQRCSTAPTSLPLHCPPPPPPLQPPSYAQSLAKSQFCHPETLSDP
PAYTPALVVTRPQSAAWTAVPTGSRTICSGTAARALRRIQSFTSTTSSSGAAHIDNQKLS
RPTSAGQAIRRSSSSKLKSNSTGTLKELNSLSAQAQSNQQAFISALQKLADKQVARHYAS
SSHINLLTQHLTNLNLANRMRSGESGTPTPEGRPAAATTQGPVKAVHSGTDRWSGTMPLK
HEEGLWDGQMQSAYSLVTGVNPQQSYQLQFAIQKLQQQRLQSRQFLDQSHCSHQLFFLFL
RLNFQTRQVLHSPSLPKTHPAALCPASISGPITATVKPVSVLLLSPQSHPAVPERGRPGK
QRQSASSSRRPRRARPVEACPAAGAWSTKPSVVKQVSSVIRSPITDDMKATGGVSRPSAG
LTGASACNCILTEVYSGKGQQQQTEDLRHQTGVLVTAL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgtggtccgcgagaaggaggactctgagtccgaagacgaagaccacgcctgc
attgcctggagcggcctcagcaagaccatcccgatcctcttgtttttccctgaagctgct
gtttcaaaagatgggagtatctgctctactggagagcgatatcatttggccttcaagatt
gtgcgcacagagagtcgcctggtacgaggactactcaccaatcatgggttccacgaggtt
cacccaaacagcaatgactttaacctcatgtggatgggatctcatctcaagccttacata
ctacgcagccttcaagacttccagaaggtcaaccactttccgaggtcgtatgaattgacg
cgcaaagaccgcctgtataaaaacatccagcgaatgcagcagactcatggcttcaaacac
ttccacatcgttcctctgacctttgtgcttccctctgagtaccaggagttctgcaattgc
tttgcgaaggacaagggcccctggatcgtaaaaccagtggcatcttcaagagggaggggc
atctacttggtcagcaatccaaatcagatattaatggacgagaacaccttggtgtctcgc
tatattaataacccactactcatagatgagttcaagttcgatgtgcggttgtacgtgttg
gtgacatcatacgatccggtcctcatctacatgtacgaggagggtctggctaggtttgcc
accgtcaagtacgaccggacttcaaagaacatcaagaacacattcatgcatctcaccaac
tacagcgtgaacaaaaagagcagcgattatgtcagttgcgatgaccctgaagttgaggat
tatgggaacaagtggagtatgagtgcagtgttgaggtatttgaagcaggaggggaaggac
accacattgctgatgagacaggtggaggacctcatcgtcaaagcagtgttgagtgccgag
ctgcagatagccaacgcctgcaagatgtacgtcccccacaagacaaactgcttcgaactg
tatgggtttgacgtgctcgttgactccaacctcaaaccctggttgttagaggtgaacctt
tccccctcgctggcctgtgatgcacccttggatctgaaaataaaggccagcatgattgca
gacatgttttcgctcgtgggctttgtgtgtcaggaccccctatcgagacaaccacgctct
gaccgagtcaccctggaccacagcctcaagcacccagcagcccaaagaacacagcgccag
aggtcagcacccgctactaactcggacacagaggggtcgaaagacaagctccgatctaac
cagggccaaggagaaagcactttgagcttgaccgctgacgagatcaaagtgctgaggagg
ataaaggaagagtacgagagacggggaggcttcattaggatcttccccaccgcagaaacc
tgggagctgtatggtggatatctggagtccaagacatcgttgaacttcatgttggcaaac
agacttttccatgaaaggaatgtgaacgggaatgtgcagccgcaggtggacgccagccac
ggacgtcacgatgtccagtacgagagaaagctgccgcctctggaggcacggaagaggaga
cagcgccacccgactcatcgctctgccgcagggaagaagaaatccgggaaggaacccaag
gcctccccgatggagagcagcagtcaggagggagaggactgcgctcaggaggaaagggag
gaggccaaacaagctctcgagtcagtctcacacaaggctttggtcacagagcaaagaaaa
caagtggctctgtccggctcagaggccgccccgcacaatgccaggcccagagtccacctg
ctcaacatccttcagcagggctgggacctcagtaaagtgcaggcccgcatggcgttttcc
tcatacctgcagcgagtccagcaaagactgctggtagaaagccgggcgaacaccatccca
gcctggccagacaaggacagcgaccaaatggagctggtggttcgcttcctcaagagagca
gccagtaaccttcaacaagacataaaggtggtcttgcccagtcgacagcttccactccaa
gaccgcagacgcatcctgtcccaccagctcggagagtttatccactcttacaacaaggaa
actgaacatgtggtgaaaaaaaacgagaagagcatggaggagcattgcgttaaccccagt
gtgtttcaggagtacatcgctgcagcaagtgaaaacgatctggaggaagttctgacattc
tacacgcagaaaaataaatcggccgccgttttcctcggaacaaaactcaggagtgttaag
agagacggtcgcgagctgaacgccttaagagattacggcaactgtgagaactccaaaact
ctccctgtggccaaagaggattccagtgcttccgagtcctcgctctccagaggtaaagtc
agctgtgacccagacatcgagagccagccctctgtccacagaaccggtcaaacccagcct
gaggtccaggcctccagctttcctgtgactttagactgcacccatacccagcgctgctcc
acagccccgacgtccctgcccctccactgtccgcccccgccgccgcctcttcagcccccg
tcctatgcacagtccttggctaaatctcaattttgccatcccgagactctctctgaccct
cctgcatacaccccggcgctcgtggtcacacggccccagagcgccgcgtggacagcggtt
cccaccggctctcgcacaatctgtagtggaacggccgcccgggcgcttaggaggattcag
tccttcacctcaacgacgtccagctctggagccgcgcacatcgataaccagaagctctct
cgacctacctctgcgggccaagcgatcaggaggagcagttccagtaagctgaagtccaac
tcaacggggactttaaaggagttaaattcgctgtcggcccaagcccagtccaaccagcaa
gccttcatctcagccctgcagaaactggctgacaagcaggttgctcgccactatgccagc
tccagtcacatcaacctgctgacacaacacttgaccaacctgaacctggccaacaggatg
cggagcggagagagcggcacaccgacccccgaagggcggccggccgctgccacgacccaa
gggccggtgaaggcggttcactccggaacagatcgatggagcggcactatgcccctgaag
catgaggagggtctttgggatggtcagatgcagagtgcctatagcttggtgacaggggtg
aacccccagcagagctaccagcttcagtttgctatacagaaactacaacagcaaagactt
cagtctcggcagtttctggaccaaagccattgcagtcaccagttgtttttcttgtttctt
aggctcaatttccagaccagacaagttctccactcgcccagcctcccaaaaactcatccg
gctgccctctgcccagcttccatatccggtccaatcacagccacagtcaaacctgtgtca
gtcctcctgctctcgccccaaagccacccagcagtgccagagaggggcagaccaggaaaa
cagcgacaaagcgcctcgtcaagcagacgtccgcggagagctcggccggtggaagcctgc
ccggcggccggcgcgtggtctacgaagccgtccgtggtcaaacaggtctcatctgtgatc
cggagcccgatcacagatgacatgaaagcgaccggcggcgtgtcccgcccctctgctggc
ctgacaggtgcctctgcatgtaactgcatcctcacagaggtgtattctgggaaaggacaa
cagcaacagacggaagatctgagacatcaaacgggggtcctcgtcaccgctctgtga
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integrated database retrieval system
