Pseudoliparis swirei (Mariana hadal snailfish): 130201346
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Entry
130201346 CDS
T09868
Symbol
lcp1
Name
(RefSeq) plastin-2
KO
K17276
plastin-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130201346 (lcp1)
04147 Exosome [BR:
pswi04147
]
130201346 (lcp1)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130201346 (lcp1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of microglial cells
130201346 (lcp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
CAMSAP_CH
DUF5580
DUF7460
Motif
Other DBs
NCBI-GeneID:
130201346
NCBI-ProteinID:
XP_056282285
LinkDB
All DBs
Position
2:complement(17047362..17057684)
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AA seq
620 aa
AA seq
DB search
MTAPVPISPEEQEELREAFAKIDVDNNGFISKAELTELFRAANLPLPGYRVREIVQELTK
TSDQLTFDEFTQIVHGLKSTAVAKTFRKAINKKEGICNVAGTSEQSGTQHSYSEEEKVAF
VNWINKALAKDADCKHVLPMDPDGDNLFTAMGDGIVLCKMINLSVPDTIDERTINKKKLT
PFTIQENLNLALNSSSAIGCHVVNIGAEDLKEGRQHLVLGLLWQVIKIGLFADIELSRNE
ALIALLRDGESLEDLMKLSPEELLLRWANYHLEEAGCGKINNFSSDIKDSKAYYNLLNQV
APKGDEEGIPPIAIDMSGLRETEDMQRAECMLDQADRLGCRQFVMPTDVVRGNPKLNLAF
VANLFNKYPALKKPENQDIDWSSIEGETREERTFRNWMNSLGVNPRVNHLYIDIDDALVI
FQLYEKIKVPVDWDKVNKPPYSKLGSNMKKLENCNYAVELGKKEAKFSLVGIAGQDLNAG
NRTLTLALLWQLMRRYTLNILEDLGAGQKVTDDTIVTWVNDMLTQAGKHKISSFKDGSIG
SSMPVLDLIDAIQPGSIRYDLLKTEDLTEEEKLNNAKYAISMARKIGARVYALPEDLVEV
NPKMVMTVFACLMARGMKRA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccagtgccgatctctccggaggaacaggaggaacttagagaagcttttgcc
aagattgatgtggacaacaatggattcatcagcaaggccgagctcaccgagctgttcagg
gccgctaacctgccgctgccgggctacagggtcagagagatcgtccaggaactgaccaag
acgtccgaccagctcacctttgatgaattcactcagattgttcatgggctgaagagcacg
gcggtggcaaagaccttcaggaaggccatcaataaaaaggagggaatctgtaacgtggcc
ggaacctcagagcagtccggcactcagcactcatactcagaggaggagaaagtggcgttt
gtaaactggatcaataaagcgctggcgaaggatgccgactgtaaacatgttctgccgatg
gatcccgacggcgacaacctgttcaccgcgatgggagacgggatcgttctctgtaagatg
atcaacctgtcggtccccgacaccatcgatgagagaaccatcaacaagaagaagctcacg
cctttcaccatccaggagaacctgaacttggctctgaactcatcgtccgccatcggctgc
cacgtggtcaacatcggagctgaggacctgaaggagggcaggcagcacctggtcctgggt
ctgctgtggcaggtcatcaagatcgggctgttcgccgacatcgagctcagcaggaatgaa
gctctgatcgctctgctgcgtgatggagagagtctggaagatctgatgaaactttcccct
gaggagctgctgctgcgttgggccaactatcacctggaggaggctggctgcggcaagatc
aataacttcagctccgacatcaaggactccaaggcgtactacaacctcctgaaccaagtg
gcacccaaaggagacgaggagggaatcccccccatcgccatcgacatgtcaggactcagg
gagacagaggacatgcagcgggccgagtgcatgctggaccaggccgaccggctcggatgc
agacagttcgtcatgccaacggacgtcgtccgcggcaaccccaaattgaacttggccttt
gttgccaatctgttcaacaagtacccggcgctgaagaaaccagagaaccaggacatcgac
tggagctccatcgaaggtgaaaccagggaggagcgaaccttcaggaactggatgaactca
ctgggggtcaaccctcgtgtcaaccacctctacatagacatcgatgacgccctggtgatc
ttccagttgtacgagaagatcaaggtgccggtggactgggacaaagtcaacaagcctccc
tactctaagctgggcagcaacatgaagaagctggagaactgtaactacgcagtggagttg
gggaagaaggaggccaaattctctctggtgggaatcgcaggtcaggacttgaacgcaggg
aatcgaactctcaccctcgctctgctctggcagctcatgaggagatacaccctgaacatc
ctggaggacctgggcgccggtcagaaagtgacggatgacaccatcgtgacctgggtcaac
gacatgctcacgcaggctgggaaacacaaaatctccagctttaaggatggttctatcggc
agcagtatgccggttctggacttgatcgatgccatccagcccggatcgatcagatatgac
ctgctgaagacagaagacctaactgaagaggagaaactcaacaatgcaaagtacgccatc
tccatggccaggaaaatcggcgcccgggtgtacgcgctgcccgaggacctggtggaggtc
aatcctaagatggtgatgacggtgtttgcctgtctcatggcccgcggcatgaagagagcc
taa
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