Pseudoliparis swirei (Mariana hadal snailfish): 130201361
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Entry
130201361 CDS
T09868
Name
(RefSeq) F-box only protein 33
KO
K10310
F-box protein 33
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130201361
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130201361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
DUF1435
Motif
Other DBs
NCBI-GeneID:
130201361
NCBI-ProteinID:
XP_056282306
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Position
11:11419784..11436586
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AA seq
487 aa
AA seq
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MALCGGVGAMALPSELIVHIFSFLSDRDKLRASTVCSRWRECLFYPALWTELKLRIGGGS
SSEETPKLEFVMRKFGSFVSELQLELAPVEGYLSPLNSDPSSTRMDQPDSDPQLSERWRD
AMATYLDQVLCVFSGIRNNRNLRKLSLYGDTCVLQQEGLLDRSNLHQIHQGDKKINEIQQ
LFMELLSHGRQLRWLSCSFMLGLVTPSSLACLSNPSAETLQHLSLLDHQLGPLISPSELN
RLSNLNSLAVDFADLTSELCALLASPQRTPLHRLSLLLNGAALEFKPLEGTATEDDWKAM
IRVSANLRVYIMALEVDSSELVRVLKPSLPLERLHLDSYSSLVTDGMLELISQQYNKTLT
HFLLLRDDPDFPDLSVNRNEDPLVLFSWRCTQLAVLVIHGYTVWSHNLVAISRLRGSSLR
TLTVSEESIDFDPDQSVSIEGDPVHNLVKEVSLGLGRVWHPCLDSSLVLSEPTQHFHREL
HAFSIGM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgcgggggtgtcggagccatggctttgcccagcgagctcatcgtccacata
ttctcttttctgtccgaccgagacaagctccgggcctcgaccgtgtgctcgcgatggagg
gagtgcctcttctacccggcgctgtggaccgagctcaaactgcggataggcggcggctcc
agctccgaggagaccccgaagctggagttcgtcatgcgcaagttcggctccttcgtgagc
gagctgcaactggagctcgcgccggtggagggctacctgagccctctgaacagcgacccg
tcgtccaccaggatggaccagcccgacagcgacccgcagctctccgagcgatggagggac
gccatggccacctacttggaccaggtgctgtgtgtgttctccggcatccgcaacaacaga
aacctgcgcaaactgagtctgtatggggacacctgtgttctccagcaggagggacttctg
gaccggtccaacctgcaccaaattcaccagggggacaaaaagatcaatgaaatccagcag
ctgttcatggagctgctgtctcacggcaggcagctccggtggctgtcctgtagcttcatg
ctgggtctggtgacccccagctccttagcctgcctatcaaatccttcagcggagaccctg
cagcacctcagtttactggaccaccagctgggtcccctcatctcgccgtcagagttgaat
cgtctatctaatcttaattctttggccgtggatttcgctgatttgacatctgagctctgc
gctctgctggcgtctcctcagcggacgccgctgcatcgcctctcgctgctgctcaacggc
gccgccctggaattcaaaccgctggaagggaccgctaccgaggacgattggaaagcaatg
atccgcgtgagtgccaacctgcgcgtgtacatcatggccctggaggtcgacagctcggag
ctcgtcagggtcctgaagcccagcctcccgctggagcgcctccacctcgacagttacagc
tcgctggtgaccgacggcatgctggagctcatatctcagcagtacaacaaaacgctgact
cacttcctgctcctgagggacgaccccgacttccccgacctcagcgtcaaccggaacgaa
gacccgctcgtcctcttttcatggaggtgcactcagctggccgtacttgtgatacatggt
tacactgtttggtcccataatttggtggccatctcccggctgcggggctccagcctccgt
accctcaccgtctccgaggagagcatcgacttcgatcccgaccagtcggtgagcattgag
ggcgacccggtgcacaatctggtgaaggaggtttctctgggcctcggccgcgtctggcac
ccctgcctggattccagcctggttttgtccgagcccacccagcacttccaccgcgagctg
cacgccttcagcatcggcatgtag
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