KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130201363
Entry
130201363         CDS       T09868                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130201363
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130201363
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pswi03021]
    130201363
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130201363
Transcription machinery [BR:pswi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130201363
    Little elongation complex (LEC)
     130201363
SSDB
Motif
Pfam: ELL Occludin_ELL Taxilin Seryl_tRNA_N A_deaminase_N
Other DBs
NCBI-GeneID: 130201363
NCBI-ProteinID: XP_056282308
LinkDB
Position
11:15923517..15935280
AA seq 602 aa
MSVLKEKRCYGLSGGNRSGGHVSVIHVKLTDSAARAIEDGKGWSSGPTICFNGTKGIISV
PRSENAAEMSVFHFGLSDVARDNPHGSFDCFQQYGSGSSEELSCLGVIQKKLTVNATDDS
YDKARQSMAQAEEETRSRGAIVIKQGARLHGKKVRVRAPGPALAGLTKPRHPVRPRSLLP
AAAKMGGVHAAAIATKPKRAACASNGKSGVQERRLGERRLGERLAHLLALRPYTRPELIL
RLQRDGLTDAEKDRLDAELLEVGQLTRDNTFLLKDVLFKELQRDWPGYTARDQQLLKRIF
IRRLFQPQHSLLAVPEAHVSPLRDTPDSSPKPPPPEEYTDPLASRKPRVSRLSGKVSGKA
RPAERAAGEGGKRESLDPRVLFDSLLTACRREEGEVAERLKAPPPCEEEPQVTESDPDRP
PSPLAAPELSGHTLRRRKSRRKHRDQDQLRARKERRRDHSSEDPDIDVSLFCVEPSEILF
DSGVLKADDDTAEYVMKYAAISQPDQRQRYKRDFNTEYSEYRDLHARIDGVTRQFMELDA
QLKRLHHDSLKYKTVRNQILQEYRKIKKSNPNYNQDRTRCEHLHNKLAHIKKLISEYDRQ
QL
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtcggtgctgaaggagaaacggtgctacgggctgtccggcggcaacaggagcggcgga
cacgtctccgtgattcacgtcaagctaactgacagcgcggcgcgagccattgaggacgga
aagggttggtcctccggtcccaccatctgtttcaacggcaccaaagggatcatctccgtt
cctcgctcagagaacgccgccgagatgagcgtcttccacttcggcctgagtgacgtcgcc
cgcgacaaccctcacggcagcttcgactgcttccagcagtacggctccgggtcctccgag
gagctttcgtgtctcggggtgattcagaagaagctgacggtcaacgccacggacgactcg
tacgacaaggctcggcagagcatggcgcaggccgaggaggagacgcgcagccggggcgcc
atcgtcatcaagcagggggcgcggctccacggtaagaaggtgagggtacgcgctccgggc
ccggcactggccggcctgaccaaaccccgacaccccgtccggccccgctcgctcctcccc
gccgccgcaaaaatgggcggcgtccacgccgccgccatagcaaccaagccgaagagggcg
gcgtgcgcgtccaacgggaagagcggcgtgcaggagcggcggctcggggagcggcggctc
ggggagcggctcgcccacctgctggccctgaggccctacaccaggcccgagctcatcctc
cggctgcagagggacgggctgacggacgcagaaaaggaccggctggacgccgagctcctg
gaggtgggtcagctcacaagagacaacaccttcctcctgaaggacgtgttgttcaaggag
ctgcagagagactggccgggctacacggccagagaccagcagctgctcaagaggatcttc
atcaggaggctgtttcagccgcagcacagcctcctcgccgtcccggaggctcatgtcagt
cctctgcgcgacacccccgactcgtccccaaagcctccgcctcccgaggagtacaccgac
cctctggccagcaggaagccgcgcgtgtcccgcctgtccggcaaagtgtccggcaaagcg
aggcccgcggaacgagcggcgggcgaaggcgggaaaagggagtcgctggacccccgggtg
cttttcgactcgttgttgacggcgtgtcggcgggaagaaggggaagtggccgagagacta
aaagctcctcccccttgtgaggaggaaccccaagtcaccgagtcagaccccgatcgcccg
ccgtcccctctggcggcacccgagctgagcggacacacactcaggaggaggaagagcaga
cgcaaacacagagatcaggatcagctgcgagccaggaaggaaaggagacgagatcacagc
tcagaggaccccgacatcgacgtctccttgttctgcgttgagccgagtgaaatcttgttt
gactccggcgtgctcaaagcagacgatgacacagcagaatatgtcatgaagtacgcggcg
atctcgcagcccgaccagcggcagcgttacaagcgtgacttcaacacggagtacagcgag
taccgagacctgcacgctcgcatcgacggcgtgacgcggcagttcatggagctggacgcg
cagctcaagaggctgcaccacgactcacttaaatacaagacggttcgtaatcaaattctt
caggagtatcgcaaaatcaaaaagtccaacccaaactacaaccaggaccggactcgctgt
gaacacctgcacaacaagctggcccacatcaagaagctcatatcggagtacgaccggcag
cagctctga

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